ID:

mml-mir-665

 Coordinate:

chr7:164772450-164772521 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-44.6 -44.6 -44.6

Sense Strand Reads

TGGGGCTTTGACAAAGCAGGGCTGGCCCTTTCTGTGCCCCAAGAGGAGGGTCTCCTCGAGGGGTCTCTGCCTCTACCCAGGACTCTTTCATGACCAGGAGGCTGAGGCCCCTCACAGGCGGCTTCTTACTCTCTCCTTAAACCTGTTCTGGAGACATTTCCCCTTTCCCCAA

***********************************......(((((((((((.(((.((((((((((.((((((...(((((....))).))....)))))).))))))))))..))).))).)))).)))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116841

prostate		 SRR116839

testes		 SRR116844

epididymis
............................................................................................ACCAGGAGGCTGAGGCCCCTCA.......................................................... 22 0 1 4.00 4 2 2 0 0
..............................................................................AGGACTCTTTCATGACCAGGAG........................................................................ 22 0 1 1.00 1 1 0 0 0
............................................................................................ACCAGGAGGCTGAGGCCCCTCAC......................................................... 23 0 1 1.00 1 0 1 0 0
...........................................................................................CACCAGGAGGCTGAGGCCCCTCAC......................................................... 24 1 1 1.00 1 1 0 0 0
............................................................................................ACCAGGAGGCTGAGGCCCCTA........................................................... 21 1 1 1.00 1 0 0 1 0
............................................................................................ACCAGGAGGCTGAGGCCCATC........................................................... 21 1 1 1.00 1 0 0 0 1

Anti-sense strand reads

ACCCCGAAACTGTTTCGTCCCGACCGGGAAAGACACGGGGTTCTCCTCCCAGAGGAGCTCCCCAGAGACGGAGATGGGTCCTGAGAAAGTACTGGTCCTCCGACTCCGGGGAGTGTCCGCCGAAGAATGAGAGAGGAATTTGGACAAGACCTCTGTAAAGGGGAAAGGGGTT

***********************************......(((((((((((.(((.((((((((((.((((((...(((((....))).))....)))))).))))))))))..))).))).)))).)))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:28 PM