ID:

mml-mir-652

 Coordinate:

chrX:109176025-109176122 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.8 -51.6 -51.6

Sense Strand Reads

CTTTTTGGCTTTGTTCCCGAACACTAGGAATGTTTCCAAGCAGGGCCGCCACGAATGGCTATGCACTGCACAACCCTAGGAGAGGGTGCCATTCACATAGACTATAATTGAATGGCGCCACTAGGGTTGTGCAGTGCACAACCTGCACAACTGTACTCGGCGGCCCTGGCATAATGTAATGTCAGTACTTTCTTCATC

******************************************************..((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...))..***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116843

cortex		 SRR116841

prostate		 SRR116844

epididymis		 SRR116839

testes
..............................................................................................................AATGGCGCCACTAGGGTTGTGATC................................................................ 24 3 1 60.00 60 50 0 0 0 0 10 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGT.................................................................. 22 1 1 52.00 52 0 19 9 11 11 0 2
..............................................................................................................AATGGCGCCACTAGGGTTGTGA.................................................................. 22 1 1 22.00 22 0 8 7 4 2 1 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGAATC............................................................... 25 3 1 22.00 22 21 0 0 0 0 1 0
..............................................................................................................AATGGCGCCACTAGGGTTGT.................................................................... 20 0 1 21.00 21 0 9 6 5 1 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGTATC............................................................... 25 3 1 10.00 10 7 0 0 0 0 3 0
..............................................................................................................AATGGCGCCACTAGGGTTGTG................................................................... 21 0 1 9.00 9 0 5 1 3 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCCAT.......................................................................................................... 23 0 1 5.00 5 0 2 0 2 1 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGTA................................................................. 23 1 1 4.00 4 0 2 1 1 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTAA.................................................................. 22 2 1 3.00 3 0 1 2 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGAA................................................................. 23 1 1 3.00 3 0 1 1 0 1 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGC.................................................................. 22 0 1 3.00 3 0 1 0 1 1 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCCATT......................................................................................................... 24 0 1 3.00 3 0 1 0 1 1 0 0
......................................................................CAACCCTAGGAGAGGGTG.............................................................................................................. 18 0 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTAGA................................................................. 23 2 1 2.00 2 0 1 1 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGC............................................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0
......................................................................CAACCCTAGGAGAGGGTGCCA........................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTG.............................................................................................................. 19 0 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTG..................................................................... 19 0 1 2.00 2 0 1 1 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGCATC............................................................... 25 2 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGTAATC.............................................................. 26 3 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGTT................................................................. 23 2 2 1.50 3 0 1 1 1 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTT...................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGCA................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................AGTGGCGCCACTAGGGTTGTGC.................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGAT................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................AATGGCTATGCACTGCA................................................................................................................................ 17 0 1 1.00 1 0 0 0 0 1 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCCATTT........................................................................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0
.............................................................................................................AAATGGCGCCACTAGGGTTGTGAAT................................................................ 25 3 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................ATGGCGCCACTAGGGTTGTGT.................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................AACAACCCTAGGAGAGGGTGCCATTC........................................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCCCTAGGGTTGTG................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTCGGGTTGTGA.................................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................AATGACGCCACTAGGGTTGTGTA................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTATC................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0
...................................................CGAATGGCTATGCACTGCA................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................ATGGCGCCACTAGGGTTGTGAA................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCA............................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTA................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCCATTCA....................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
......................................................................CAACCCTAGGAGAGGGTGC............................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGG........................................................................ 16 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTTTG................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
............................................................................................................TGAATGGCGCCACTAGGGTTGTGTATC............................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................ATGGCGCCACTAGGGTTGTGCA................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0
................................................CCACGAATGGCTATGCACTGCA................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0
...............................................................................................................CTGGCGCCACTAGGGTTGTGA.................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGCCTTTC........................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGAAATC.............................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACAACCCTAGGAGAGGGTGT............................................................................................................. 20 1 2 1.00 2 0 0 2 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTT................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................AATGGTGCCACTAGGGTTGTGG.................................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTTA.................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTTT.................................................................. 22 2 2 0.50 1 0 0 0 1 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTTGTGTTC................................................................ 24 3 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................................CATGGCGCCCCTAGGGTTGTGT.................................................................. 22 3 6 0.17 1 0 1 0 0 0 0 0
..............................................................................................................AATGGCGCCACTAGGGTAA..................................................................... 19 2 8 0.13 1 0 0 0 1 0 0 0

Anti-sense strand reads

GAAAAACCGAAACAAGGGCTTGTGATCCTTACAAAGGTTCGTCCCGGCGGTGCTTACCGATACGTGACGTGTTGGGATCCTCTCCCACGGTAAGTGTATCTGATATTAACTTACCGCGGTGATCCCAACACGTCACGTGTTGGACGTGTTGACATGAGCCGCCGGGACCGTATTACATTACAGTCATGAAAGAAGTAG

*****************************************************..((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...))..****************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:34 PM