ID:

mml-mir-632

 Coordinate:

chr16:28466461-28466554 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-57.9 -57.8 -57.7 -57.4

Sense Strand Reads

CACCCACTCAGGGCGGAGGTCTGCGTCCTGTGACCCTCCCTTCCTGGCTCCGCCTCCTGCCGCAGTGCCTGACGGGAGGCGGAGCGGCGAACGAGGCCGTCGGCCATTTTGTGTCTGCTTCCTGTGGGACGCGGTCGTAGCCGTTGGGTCGGGAAAGTGAGGGATTTTCGCCTCGTTTCTCCTGCTTCTTTTCT

***********************************((.....((((((.(((....((((.((.(((.((.((((((((((((...(((((...((((...))))..))))).)))))))))))).)).))).)).))))....)))))))))..))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis		 SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle
...................................................................................................................TGCTTCCTGTGGGACGCGG............................................................ 19 0 1 2.00 2 0 2 0 0 0
.......................................................................................................................TCCTGTGGGACGCGGTCG......................................................... 18 0 1 2.00 2 0 0 0 1 1
.........................................................................................................ATTTTGTGTCTGCTTCCTGTGGGACGCGG............................................................ 29 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................CTGTGGGACGCGGTCGTA....................................................... 18 0 1 1.00 1 0 0 1 0 0
........................................................................................................CATTTTGTGTCTGCTTCCTGTGGGCCGCGG............................................................ 30 1 1 1.00 1 1 0 0 0 0
........................................................................................................CATTTTGTGTCTGCTTCCTGTGGGACGCGG............................................................ 30 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................TCCTGTGGGACGCGG............................................................ 15 0 2 0.50 1 0 1 0 0 0
....................................................................ATGGCGGAAGGCGGAGCGGCG......................................................................................................... 21 3 20 0.05 1 0 0 1 0 0
......................................................................................................................................................................CTCGCCTCGTTTCTCCTTC......... 19 2 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

GTGGGTGAGTCCCGCCTCCAGACGCAGGACACTGGGAGGGAAGGACCGAGGCGGAGGACGGCGTCACGGACTGCCCTCCGCCTCGCCGCTTGCTCCGGCAGCCGGTAAAACACAGACGAAGGACACCCTGCGCCAGCATCGGCAACCCAGCCCTTTCACTCCCTAAAAGCGGAGCAAAGAGGACGAAGAAAAGA

***********************************((.....((((((.(((....((((.((.(((.((.((((((((((((...(((((...((((...))))..))))).)))))))))))).)).))).)).))))....)))))))))..))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:13 PM