ID:

mml-mir-599

 Coordinate:

chr8:104391537-104391631 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.9 -43.8 -43.8

Sense Strand Reads

CTACGTGACTTCTATTCAGAACTTTAATGACTGGGAATGTGTTTAATGCCAAAGACATGCTGTCCACAGTGTGTTTGATAAGCTGACATGGGACAGGGATTCTTTTCACTGTTGTGTCAGTTTATCAAACCCATACTTGGATGACAGTCAATTCAGTTAAAGGATAATGGGCTCCCAGGATACAAAACATTATTT

***********************************.......(((((......(((.((.((((((.((((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))).)))))......)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116843

cortex		 SRR116844

epididymis
.........................................................................TTTGATAAGCTGACATGGGACA.................................................................................................... 22 0 1 8.00 8 2 2 2 2 0
.........................................................................TTTGATAAGCTGACATGGGACAT................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
.........................................................................TTTGATAAGCTGACATGGGACATC.................................................................................................. 24 2 1 1.00 1 0 0 0 0 1
.........................................................................TTTGATAAGCTGACATGTGACA.................................................................................................... 22 1 2 0.50 1 0 1 0 0 0

Anti-sense strand reads

GATGCACTGAAGATAAGTCTTGAAATTACTGACCCTTACACAAATTACGGTTTCTGTACGACAGGTGTCACACAAACTATTCGACTGTACCCTGTCCCTAAGAAAAGTGACAACACAGTCAAATAGTTTGGGTATGAACCTACTGTCAGTTAAGTCAATTTCCTATTACCCGAGGGTCCTATGTTTTGTAATAAA

***********************************.......(((((......(((.((.((((((.((((((((((((((((((((((..((((((((.....))).))))))))))))))))))))))..))))))))))).)))))......)))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis
.................................................................................................CTAAGAAAAGTGGCAA.................................................................................. 16 1 20 0.05 1 1

Generated: 09/01/2015 at 12:32 PM