ID:

mml-mir-584

 Coordinate:

chr6:147128262-147128358 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

AAATGGAGAGTTGTTGCTCTAAAAAATTGTCAAGTCGTGGGAGAGTGACTTAGGGTGACCAGCCATTATGGTTTGCCTGGGACTGAGGAATTTGCTGGGATATGTCAGTTCCAGGCCAACCAGGCTGGTTGGTTTCCCTGAAGCAACCTTCTTCTTTTTTTCAGAGGAGAATGAAGGTAGGGCACTGTGTTCTCTTG

**************************************************(((((.(((((((((...(((((.((((((((((((...((((....))))...)))))))))))).)))))...))))))))).))))).******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116839

testes		 SRR116841

prostate		 SRR116845

epididymis		 SRR116844

epididymis
.................................................................TTATGGTTTGCCTGGGACTGA............................................................................................................... 21 0 1 220.00 220 132 38 27 14 9 0 0
.................................................................TTATGGTTTGCCTGGGACTGT............................................................................................................... 21 1 1 23.00 23 16 2 3 1 1 0 0
.................................................................TTATGGTTTTCCTGGGACTGA............................................................................................................... 21 1 1 18.00 18 14 0 3 1 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAA.............................................................................................................. 22 1 1 17.00 17 5 6 6 0 0 0 0
.................................................................TTATGGTTTGCCTTGGACTGA............................................................................................................... 21 1 1 15.00 15 13 0 0 2 0 0 0
.................................................................TTATGGTTTGCCTGGGACTTA............................................................................................................... 21 1 2 7.00 14 14 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAATC............................................................................................................ 24 3 2 6.50 13 0 0 0 0 0 12 1
.................................................................TTATGGTTTGCCTGGGACTG................................................................................................................ 20 0 1 5.00 5 5 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAT.............................................................................................................. 22 1 2 4.50 9 3 3 3 0 0 0 0
.................................................................TTATGGTTTGCCTGTGACTGA............................................................................................................... 21 1 1 4.00 4 2 0 1 0 1 0 0
.................................................................TTATGGTTTGCCTGGGACT................................................................................................................. 19 0 1 2.00 2 1 1 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGAC.................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAGAAC........................................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................ATTATGGTTTGCCTGGGACTGA............................................................................................................... 22 0 1 2.00 2 1 0 1 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGTA.............................................................................................................. 22 2 3 1.33 4 2 2 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAGAATC.......................................................................................................... 26 3 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATGGTTTGCCTGGGACTGAGT............................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAAT............................................................................................................. 23 2 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATGGTTTGCCTGGGACTGAAGAAC.......................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................ATATGGTTTGCCTGGGACTGA............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
................................................................ATTATGGTTTGCCTGGGACTGT............................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAG.............................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATGGTTTGCCCGGGACTGA............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGACGAAC.......................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
................................................................ATTATGGTTTGCCTGTGACTGAA.............................................................................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0
.................................................................TTATGGTTCGCCTGGGACTGA............................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................GTATGGTTTGCCTGGGACTGA............................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAAA............................................................................................................. 23 2 2 1.00 2 1 0 0 1 0 0 0
........................................................................................................TCAGTTCCAGGCCAACCAGGCT....................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................................................ATTATGGTTTGCCTGGGACTGACAAC........................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTAA............................................................................................................... 21 1 3 0.67 2 0 0 2 0 0 0 0
.................................................................TTATTGTTTGCCTGGGACTGA............................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGATA............................................................................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGCCTGAAAA............................................................................................................ 24 3 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTTGGACTGAA.............................................................................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
........................................................................................................TCAGTTCCAGGCCAACCAGGCAT...................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAGATC........................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1
.................................................................TTATGGTTTGCCTGGTACTGA............................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGTGACTTA............................................................................................................... 21 2 9 0.33 3 3 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACA................................................................................................................. 19 1 6 0.33 2 1 0 1 0 0 0 0
.................................................................TTATGGTTTGCCTTGTACTGA............................................................................................................... 21 2 7 0.29 2 2 0 0 0 0 0 0
.................................................................CTATGGTTTGCCTGGGACTG................................................................................................................ 20 1 4 0.25 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTTAA.............................................................................................................. 22 2 4 0.25 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTGAAGGAC.......................................................................................................... 26 3 5 0.20 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTCCCTGGGACTGT............................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTTGGACTTA............................................................................................................... 21 2 6 0.17 1 0 0 1 0 0 0 0
.................................................................TTATGGTTTGTCTTGGACTGA............................................................................................................... 21 2 7 0.14 1 0 0 0 1 0 0 0
.................................................................TTATGGTTTTCCTGTGACTGA............................................................................................................... 21 2 9 0.11 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCTTTGGACTGA............................................................................................................... 21 2 9 0.11 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGTACTGAAT............................................................................................................. 23 3 10 0.10 1 0 0 0 0 1 0 0
.................................................................TTATGGTTTTCCTGGGACTTA............................................................................................................... 21 2 11 0.09 1 1 0 0 0 0 0 0
..........................................................................................................AGTTCCAGGCCAACCAGA......................................................................... 18 1 17 0.06 1 1 0 0 0 0 0 0
.................................................................TTATGGTTTGCCTGGGACTAT............................................................................................................... 21 2 17 0.06 1 1 0 0 0 0 0 0

Anti-sense strand reads

TTTACCTCTCAACAACGAGATTTTTTAACAGTTCAGCACCCTCTCACTGAATCCCACTGGTCGGTAATACCAAACGGACCCTGACTCCTTAAACGACCCTATACAGTCAAGGTCCGGTTGGTCCGACCAACCAAAGGGACTTCGTTGGAAGAAGAAAAAAAGTCTCCTCTTACTTCCATCCCGTGACACAAGAGAAC

********************************************************(((((.(((((((((...(((((.((((((((((((...((((....))))...)))))))))))).)))))...))))))))).))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:26 PM