ID:

mml-mir-551b

 Coordinate:

chr2:121071140-121071234 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.6 -39.5

Sense Strand Reads

TATAACCTTCTAGCTAACTGTCCTGACTTCAGACCTCTGTTAGAGCTGCCAGATGTGCTCTCCTGGCCCATGAAATCAAGCGTGGGTGAGACCTGGTGCAGAACAGGAAGGCGACCCATACTTGGTTTCAGAGGCTGCGAGAATACCTGCGATTTAGAAGGAATACCATTTATGTTTATGCAGGCCTTCCAGAGA

********************************************************..((((.(((((..((((((((((.((((((....((((........))))......)))))).))))))))))..))))).))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116841

prostate		 SRR116839

testes		 SRR116840

epididymis		 SRR116842

seminal vesicle
..............................................................................................................GCGACCCATACTTGGTTTCAGT............................................................... 22 1 1 24.00 24 20 2 2 0 0
..............................................................................................................GCGACCCATACTTGGTTTCA................................................................. 20 0 1 17.00 17 16 1 0 0 0
..............................................................................................................GCGACCCATACTTGGTTTCAG................................................................ 21 0 1 5.00 5 4 0 0 0 1
..............................................................................................................GCGACCCATACTTGGTTT................................................................... 18 0 1 5.00 5 3 1 0 1 0
.......................................................................GAAATCAAGCGTGGGTGAGACCT..................................................................................................... 23 0 1 4.00 4 2 0 2 0 0
..............................................................................................................GCGACCCATACTTGGTTTC.................................................................. 19 0 1 3.00 3 3 0 0 0 0
.......................................................................GAAATCAAGCGTGGGTGAGACCTA.................................................................................................... 24 1 1 2.00 2 1 1 0 0 0
.......................................................................GAAATCAAGCGTGGGTGAGACC...................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
..............................................................................................................GCGACCCATACTTGGTTTCAT................................................................ 21 1 1 1.00 1 1 0 0 0 0
..............................................................................................................GCGACCCATACTTGGTTTCACT............................................................... 22 2 1 1.00 1 1 0 0 0 0
..............................................................................................................GCGACCCATACTTGGTTTCAC................................................................ 21 1 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

ATATTGGAAGATCGATTGACAGGACTGAAGTCTGGAGACAATCTCGACGGTCTACACGAGAGGACCGGGTACTTTAGTTCGCACCCACTCTGGACCACGTCTTGTCCTTCCGCTGGGTATGAACCAAAGTCTCCGACGCTCTTATGGACGCTAAATCTTCCTTATGGTAAATACAAATACGTCCGGAAGGTCTCT

**************************************************..((((.(((((..((((((((((.((((((....((((........))))......)))))).))))))))))..))))).))))...******************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:19 PM