ID:

mml-mir-549a

 Coordinate:

chr7:59417049-59417143 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

GAGTGTGTTTCTAAGTTGACTGTTGAGAACTTGGCATAACATCTTCTGATAGACATGCAACTCAAGAATATATTGAGAGCTCATCCATAGTTGTCACTGTCTCAGATCATGACAATTATGGATGAGCTCTTAATATATCCCAGGCACTGTGCTAGACATTTTCCATGCATCTTTGTATGTAATCCCCGCCAGGAA

***********************************..............(((((((((.......((.((((((((((((((((((((((((((((..(((...)))..))))))))))))))))))))))))))))))....))).))).)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis
....................................................................TAGATTGAGAGCTCATC.............................................................................................................. 17 1 19 0.05 1 1
....................................................................CATATTGAGAGCTCATC.............................................................................................................. 17 1 20 0.05 1 1

Anti-sense strand reads

CTCACACAAAGATTCAACTGACAACTCTTGAACCGTATTGTAGAAGACTATCTGTACGTTGAGTTCTTATATAACTCTCGAGTAGGTATCAACAGTGACAGAGTCTAGTACTGTTAATACCTACTCGAGAATTATATAGGGTCCGTGACACGATCTGTAAAAGGTACGTAGAAACATACATTAGGGGCGGTCCTT

***********************************..............(((((((((.......((.((((((((((((((((((((((((((((..(((...)))..))))))))))))))))))))))))))))))....))).))).)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate		 SRR116840

epididymis
..........................................................................CTCTCGAGTAGGTATCAACAG.................................................................................................... 21 0 1 2.00 2 0 2
..........................................................................ATCTCGAGTAGGTATCAACAGT................................................................................................... 22 1 1 1.00 1 1 0
.........................................................................ACTCTCGAGTAGGTATCAACAG.................................................................................................... 22 0 1 1.00 1 1 0
........................................................................ATCTCTCGAGTAGGTATCAACAG.................................................................................................... 23 1 1 1.00 1 1 0
..........................................................................CTCTCTAGTAGGTATCAACAG.................................................................................................... 21 1 1 1.00 1 0 1
.........................................................................AATCTCGAGTAGGTATCAACAG.................................................................................................... 22 1 1 1.00 1 1 0

Generated: 09/01/2015 at 12:27 PM