ID:

mml-mir-548a

Coordinate:

chr4:18720653-18720750 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]

Legend:

mature

star

mismatch in read

Predicted structure

-28.1	-28.1	-28.1

mature

star

Sense Strand Reads

GAGTAAGTTATTGGAATAGTTAGAACTTAGTGAAATTAATATTTATGCACTCCAGGGAGGTATTAAGTTGGTGCAAAAGTAATTGTGGTTTTTTGCCATTAAAAGTAATGACAATACTGGCAATTACTTTTCCTCCAAACCTGATATTTTTGGTAATAGCTACATATGTCCTTCAAATCACTTAGCTTCCTAAATGGT *********************************................(((..(((((((((.(((((...((((((((((((......(((.(((((....))))).))).....))))))))))))...)).))).))))))))))))..........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR116839 testes	SRR116840 epididymis	SRR116843 cortex
.........................................................................CAAAAGTAATTGTGGTTTTTT........................................................................................................	21	0	20	0.15	3	1	2	0
..........................................................................AAAAGTAATTGTGGTTTTTTG.......................................................................................................	21	0	12	0.08	1	0	0	1
.......................................................................TGCAAAAGTAATTGTGGTTTTTTAC......................................................................................................	25	1	20	0.05	1	1	0	0

Anti-sense strand reads

CTCATTCAATAACCTTATCAATCTTGAATCACTTTAATTATAAATACGTGAGGTCCCTCCATAATTCAACCACGTTTTCATTAACACCAAAAAACGGTAATTTTCATTACTGTTATGACCGTTAATGAAAAGGAGGTTTGGACTATAAAAACCATTATCGATGTATACAGGAAGTTTAGTGAATCGAAGGATTTACCA *********************************................(((..(((((((((.(((((...((((((((((((......(((.(((((....))))).))).....))))))))))))...)).))).))))))))))))..........*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total

Generated: 09/01/2015 at 12:23 PM