ID:

mml-mir-519d

 Coordinate:

chr19:59548064-59548154 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.1 -46.1 -45.9

Sense Strand Reads

AACCTGGTCAAGGAAGATTTCAACAAAAAACCCAGAGTGCTGGAGCGAGATCCCAAGCTGTGACCCTCCAAAGGGAAGCACTTTCTGTTTGTTGTCTGAGAGAAAACAAAGTGCTTCCTTTTAGAGTGTGACCGCTTGGGAAAAGCAGCGTTCAGGATGGTGCTGATCTTGGTCATGCATTTGCAGAGCAT

*************************************************.((((((((.((.((.(((.((((((((((((((..(((((.............))))))))))))))))))).))).)).)).))))))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis		 SRR116839

testes		 SRR116842

seminal vesicle		 SRR116841

prostate
..........................................................................................................CAAAGTGCTTCCTTTTAGAGTGT.............................................................. 23 0 1 3.00 3 1 1 1 0
................................................................CCTCCAAAGGGAAGCACTTTCT......................................................................................................... 22 0 1 2.00 2 2 0 0 0
................................................................CCTCCAAAGGGAAGCACTTTCTGT....................................................................................................... 24 0 1 1.00 1 0 1 0 0
................................................................CCTCCAAAGGGAAGCACTTTCTGAA...................................................................................................... 25 2 1 1.00 1 1 0 0 0
................................................................CCTCCAAAGGGAAGCACTTTCTGTT...................................................................................................... 25 0 1 1.00 1 0 1 0 0
............................................GCGAGATCCCAAGCTGTGAC............................................................................................................................... 20 0 1 1.00 1 0 1 0 0
..........................................................................................................CAAAGTGCTTCCTTTTAGAGTG............................................................... 22 0 1 1.00 1 1 0 0 0
..........................................................................................................CAAAGTGCTTCCTTTTATATTG............................................................... 22 2 5 0.20 1 0 0 0 1

Anti-sense strand reads

TTGGACCAGTTCCTTCTAAAGTTGTTTTTTGGGTCTCACGACCTCGCTCTAGGGTTCGACACTGGGAGGTTTCCCTTCGTGAAAGACAAACAACAGACTCTCTTTTGTTTCACGAAGGAAAATCTCACACTGGCGAACCCTTTTCGTCGCAAGTCCTACCACGACTAGAACCAGTACGTAAACGTCTCGTA

***********************************************.((((((((.((.((.(((.((((((((((((((..(((((.............))))))))))))))))))).))).)).)).))))))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis
...................................................................GGTTTCCCTTCGTGAAA........................................................................................................... 17 0 2 0.50 1 1

Generated: 09/01/2015 at 12:17 PM