ID:

mml-mir-491

 Coordinate:

chr15:57109667-57109750 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.8 -47.6

Sense Strand Reads

GCGCCTTGGATACTTTCAACAGTTAACTTCGGAGATGTCTGCTGTGGGAATTGACTTAGCTGGGTAGTGGGGAACCCTTCCATGAGGAGTAGAACACTCCTTATGCAAGATTCCCTTCTACCTGGCTGGGTTGGAGTCATATCCTACAGGTCCTTACCATGAAGAAGAAGATGAAGGCTTGGAG

**************************************************(((((((((((((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).)))))))))))))))))..************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116841

prostate		 SRR116842

seminal vesicle		 SRR116840

epididymis
.................................................................AGTGGGGAACCCTTCCATGAGGA................................................................................................ 23 0 1 37.00 37 31 0 0 2 2 2
.................................................................AGTGGGGAACCCTTCCATGAGGATC.............................................................................................. 25 2 1 26.00 26 0 17 9 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGG................................................................................................. 22 0 1 21.00 21 18 0 0 2 1 0
...................................................................TGGGGAACCCTTCCATGAGGAGTATC........................................................................................... 26 2 1 14.00 14 0 10 4 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAG.................................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGGAT............................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGGAA............................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGA................................................................................................. 22 1 1 3.00 3 2 0 0 0 0 1
...................................................................................................CTTATGCAAGATTCCCTTCTAC............................................................... 22 0 1 2.00 2 0 0 0 0 1 1
...................................................................TGGGGAACCCTTCCATGAGGAGA.............................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGAGATC............................................................................................ 25 3 1 2.00 2 0 2 0 0 0 0
................................................................AAGTGGGGAACCCTTCCATGAGG................................................................................................. 23 1 1 2.00 2 2 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGATC................................................................................................. 22 2 1 2.00 2 0 0 2 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGAGT.............................................................................................. 23 0 1 2.00 2 1 0 0 0 1 0
.................................................................AGTGGGGAACCCTTCCATGAA.................................................................................................. 21 1 1 2.00 2 1 0 0 0 1 0
.................................................................AGTGGGGAACCCTTCCATGAGGAAA.............................................................................................. 25 2 1 2.00 2 1 0 0 1 0 0
....................................................................................................TTATGCAAGATTCCCTTCTA................................................................ 20 0 1 1.00 1 0 0 0 1 0 0
...................................................................TGGGGAACCCTTCCATGAGGAG............................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
.................................................................ATTGGGGAACCCTTCCATGAGGAATC............................................................................................. 26 3 1 1.00 1 0 1 0 0 0 0
..................................................................GTGGGGAACCCTTCCATGAGGAATC............................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0
.................................................................AGTGGGGAACCCTTCCAT..................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
.................................................................AGTGGGGAACTCTTCCATGAGGAA............................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGAG................................................................................................ 23 2 1 1.00 1 0 0 0 0 1 0
.................................................................AGTGGGGAACCCTTCCATGAGGAATC............................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGGAGA.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGATT.............................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGT................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGGGGAACTCTTCCATGAGGA................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACTCTTCCATGAGGA................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACTCTTCCATGA................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGATC.............................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGAGAATC........................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0
.................................................................ATTGGGGAACCCTTCCATGAGGATC.............................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0
.................................................................AGTGGGGAACCGTTCCATGAGG................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGTGGAACCCTTCCATGAGGAATC............................................................................................. 26 3 1 1.00 1 0 1 0 0 0 0
....................................................................................................TTATGCAAGATTCCCTTCTAC............................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................CTTATGCAAGATTCCCTTCTACCA............................................................. 24 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACTCTTCCATGATG................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATG.................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGTGGAACCCTTCCATGAGGATC.............................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0
...................................................................................................CTTATGCAAGATTCCCTTCTACA.............................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................CTTATGCAAGATTCCCTTCTACCGGGTT......................................................... 28 2 1 1.00 1 0 0 0 0 1 0
.................................................................AGTGGGGAACCCTTCCATGAGGT................................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1
.................................................................AGTGGGGAACCCTTCCCTGAGGAGA.............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...................................................................TGGGGAACCCTTCCATGAGGA................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGGATTATC........................................................................................... 28 3 1 1.00 1 0 1 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGGAAAAA............................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAATCCTTCCATGAGGA................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACCCTTCCATGAGC................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAACTCTTCCATGAGGTA............................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0
.................................................................AGTGGGGAATTCTTCCATGAGGA................................................................................................ 23 2 2 0.50 1 1 0 0 0 0 0

Anti-sense strand reads

CGCGGAACCTATGAAAGTTGTCAATTGAAGCCTCTACAGACGACACCCTTAACTGAATCGACCCATCACCCCTTGGGAAGGTACTCCTCATCTTGTGAGGAATACGTTCTAAGGGAAGATGGACCGACCCAACCTCAGTATAGGATGTCCAGGAATGGTACTTCTTCTTCTACTTCCGAACCTC

************************************************(((((((((((((((((.((((((..(((.((((((((((.....)))))))))).))).)))))).)))))))))))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:11 PM