ID:mml-mir-488 |
Coordinate:chr1:207349000-207349082 - |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -33.2 | -33.2 |
 |
 |
|
CTGGTGTTTCCTCCTAAGGAAGAAAGAAGAGCCTAGAGTGGAAAATTTCAGAGAATCATCTCTCCCAGATAATGGCACTCTCAAACAAGTTTCCAAGTTGTTTGAAAGGCTATTTCTTGGTCAGATGACTCTCAATTTCTTCTGGAAGACTCAGTAGTCATATTTTACTGTTTAGACAAATGA
************************************************..((((.((((((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..)))))).))))...*********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR116843 cortex |
SRR116840 epididymis |
SRR116841 prostate |
SRR116842 seminal vesicle |
SRR116844 epididymis |
SRR116839 testes |
SRR116845 epididymis |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................CCCAGATAATGGCACTCTCA.................................................................................................... | 20 | 0 | 1 | 469.00 | 469 | 393 | 56 | 12 | 5 | 0 | 3 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAA................................................................................................... | 21 | 0 | 1 | 305.00 | 305 | 254 | 40 | 5 | 5 | 0 | 1 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAAC................................................................................................. | 23 | 0 | 1 | 91.00 | 91 | 77 | 9 | 3 | 1 | 0 | 1 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAACA................................................................................................ | 24 | 0 | 1 | 68.00 | 68 | 57 | 8 | 3 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAA.................................................................................................. | 22 | 0 | 1 | 44.00 | 44 | 37 | 5 | 2 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCAAACA................................................................................................ | 23 | 0 | 1 | 35.00 | 35 | 31 | 3 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAACT................................................................................................ | 24 | 1 | 1 | 33.00 | 33 | 24 | 5 | 1 | 1 | 0 | 2 | 0 |
| ................................................................CCAGATAATGGCACTCTCAA................................................................................................... | 20 | 0 | 1 | 19.00 | 19 | 14 | 4 | 0 | 1 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTCATC.......................................................... | 24 | 2 | 1 | 14.00 | 14 | 0 | 0 | 0 | 0 | 10 | 0 | 4 |
| ................................................................CCAGATAATGGCACTCTCA.................................................................................................... | 19 | 0 | 1 | 13.00 | 13 | 9 | 4 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAT................................................................................................... | 21 | 1 | 1 | 13.00 | 13 | 4 | 8 | 0 | 0 | 0 | 1 | 0 |
| ...............................................................CCCAGATAATGGCACTC....................................................................................................... | 17 | 0 | 1 | 10.00 | 10 | 8 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTC..................................................................................................... | 19 | 0 | 1 | 7.00 | 7 | 6 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCAAAC................................................................................................. | 22 | 0 | 1 | 6.00 | 6 | 5 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAC.................................................................................................. | 22 | 1 | 1 | 6.00 | 6 | 5 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCC.................................................................................................... | 20 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCT.................................................................................................... | 20 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAACAA............................................................................................... | 25 | 0 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAT.................................................................................................. | 22 | 1 | 1 | 4.00 | 4 | 0 | 3 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCCAAC................................................................................................. | 23 | 1 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAGAGGCTATTTCTTGGT.............................................................. | 20 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAACG................................................................................................ | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCT...................................................................................................... | 18 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCCCAA................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TTTGAAAGGCTATTTCTTGGT.............................................................. | 21 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTATCAA................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTAA............................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................TTTGAAAGGCTATTTCTTGG............................................................... | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAATA................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................CAGATAATGGCACTCTCAAACA................................................................................................ | 22 | 0 | 1 | 2.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ....................................................................................................TTTGAAAGGCTATTTCTTGGTA............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGCTAATGGCACTCTCA.................................................................................................... | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCAAACAA............................................................................................... | 24 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAAA................................................................................................. | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCCA................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCTAGATAATGGCACTCTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAATT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCCT................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGCCACTCTCAAACA................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................TCCCAGATAATGGCACTCTCA.................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAATC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTTAAACA................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTAAAACT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGCCACTCTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTCT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTATCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCGGATAATGGCACTCTCAAACA................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTCA............................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAACGGCACTCTCAAACT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGTCACTCTCAA................................................................................................... | 21 | 1 | 3 | 1.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGTCACTCTCAAACT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGG............................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAAAT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCGA................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................TCCCAGATAATGGCACTCTCAT................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................TCCAGATAATGGCACTCTCAA................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCAAA.................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGGACTCTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTT............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTTAAACT................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACACTCAAAC................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCCCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATTGCACTCTCAA................................................................................................... | 21 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCAAACATC.............................................................................................. | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................CCCAGATGATGGCACTCTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACACTCACAC................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTA..................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCCAACA................................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTGA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCAGATAATGGCACTCTCAAC.................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................CCCGATAATGGCACTCTCAA................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTAA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGTACTCTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGCCACTCTCAA................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACACTCA.................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCATAT................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCAGTCTCA.................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAGAGGCTATTTCTTGGTAA............................................................ | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CTCAGATAATGGCACTCTCA.................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATTGCACTCTCA.................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGACACTCTCA.................................................................................................... | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCCCTCTCAA................................................................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTTATC.......................................................... | 24 | 3 | 4 | 0.50 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| .....................................................................................................TTGAAAGGCTATTTCTTGTT.............................................................. | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGACACTCTCAA................................................................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGTCACTCTCA.................................................................................................... | 20 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCCGG.................................................................................................. | 22 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGTATC........................................................... | 23 | 3 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................CCCAGATAATGGCACTCTCATTT................................................................................................. | 23 | 3 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTGGATC............................................................ | 22 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .....................................................................................................TTGAAAGGCTATTTCTTT................................................................ | 18 | 1 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
GACCACAAAGGAGGATTCCTTCTTTCTTCTCGGATCTCACCTTTTAAAGTCTCTTAGTAGAGAGGGTCTATTACCGTGAGAGTTTGTTCAAAGGTTCAACAAACTTTCCGATAAAGAACCAGTCTACTGAGAGTTAAAGAAGACCTTCTGAGTCATCAGTATAAAATGACAAATCTGTTTACT
***********************************************..((((.((((((..((.(((.((((((.((.((((((((.((...)).)))))))).))))))))))).))..)))))).))))...************************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 12:05 PM