ID:

mml-mir-451

 Coordinate:

chr16:24781544-24781615 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.8 -48.8 -48.1

Sense Strand Reads

CCCAAGAAGCTCTCCGCTCAGCCTGTCACAGCCTACTGACTGCCAGGGCACTTGGGAATGGCAAGGAAACCGTTACCATTACTGAGTTTAGTAATGGTAAGGGTTCTCTTGCTATATCCAGAAAACGTGCCAGGAAGAGAACTCAGGACCCTGGAGCTGACTACTGGGAGAC

***********************************.......((..((((((((((.(((((((((.((((.((((((((((((....)))))))))))).)))).))))))))).))))).....))))).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116840

epididymis		 SRR116844

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116839

testes		 SRR116845

epididymis
..................................................................AAACCGTTACCATTACTGAGTTT................................................................................... 23 0 1 1053.00 1053 448 268 0 168 142 27 0
..................................................................AAACCGTTACCATTACTGAGTT.................................................................................... 22 0 1 596.00 596 256 156 0 92 69 23 0
..................................................................AAACCGTTACCATTACTGAGTATC.................................................................................. 24 2 1 242.00 242 0 0 210 0 0 0 32
..................................................................AAACCGTTACCATTACTGAGTTTA.................................................................................. 24 0 1 219.00 219 76 54 1 43 35 10 0
..................................................................AAACCGTTACCATTACTGAGT..................................................................................... 21 0 1 178.00 178 70 59 0 26 19 4 0
..................................................................AAACCGTTACCATTACTGAGTTTATC................................................................................ 26 2 1 93.00 93 0 0 82 0 0 0 11
..................................................................AAACCGTTACCATTACTGAGTTTAGT................................................................................ 26 0 1 64.00 64 27 19 0 6 11 1 0
..................................................................AAACCGTTACCATTACTGAGTTATC................................................................................. 25 3 1 48.00 48 0 0 45 0 0 0 3
..................................................................AAACCGTTACCATTACTGAGTTTAGATC.............................................................................. 28 3 1 46.00 46 0 0 40 0 0 0 6
..................................................................AAACCGTTACCATTACTGAGTTTAG................................................................................. 25 0 1 39.00 39 20 12 0 3 2 2 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTATC............................................................................. 29 2 1 30.00 30 0 0 24 0 0 0 6
..................................................................AAACCGTTACCATTACTGAG...................................................................................... 20 0 1 24.00 24 4 10 0 5 5 0 0
..................................................................AAACCGTTACCATTACTTAGTTT................................................................................... 23 1 1 21.00 21 5 12 0 0 4 0 0
..................................................................AAACCGTTACCATTACTGATTTT................................................................................... 23 1 1 19.00 19 7 8 0 0 4 0 0
..................................................................AAACCGTTACCATTACTGAGATC................................................................................... 23 2 1 11.00 11 0 0 11 0 0 0 0
..................................................................AAACCGTTACCATTACTTAGTT.................................................................................... 22 1 1 10.00 10 5 1 0 0 4 0 0
..................................................................AAACCGTTACCATTACTGATTT.................................................................................... 22 1 1 9.00 9 3 4 0 0 2 0 0
..................................................................AAACCGTTACCATTACTGA....................................................................................... 19 0 1 8.00 8 0 4 0 3 1 0 0
................................................................AAAAACCGTTACCATTACTGAGTTT................................................................................... 25 2 1 7.00 7 5 1 0 0 1 0 0
..................................................................AAACCGTTACCATTACTGATTTTA.................................................................................. 24 1 1 6.00 6 4 0 0 0 2 0 0
..................................................................AAACCGTTACCATTACTTATTTT................................................................................... 23 2 1 5.00 5 0 2 0 0 3 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAA................................................................................. 25 1 1 5.00 5 3 1 0 1 0 0 0
..................................................................AAACCGTTACCATTACTGATT..................................................................................... 21 1 1 5.00 5 1 2 0 0 2 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAT................................................................................. 25 1 1 5.00 5 2 2 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGAT............................................................................... 27 2 1 4.00 4 0 0 4 0 0 0 0
..................................................................AAACCGTTACCATTACTTAGT..................................................................................... 21 1 1 4.00 4 3 0 0 0 0 1 0
..................................................................AAACCGTTACTATTACTGAGTTT................................................................................... 23 1 1 4.00 4 2 2 0 0 0 0 0
..................................................................AAACCGTTACCGTTACTGAGTT.................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0 0
................................................................AAAAACCGTTACCATTACTGAGTT.................................................................................... 24 2 1 4.00 4 1 2 0 0 1 0 0
......................................................................CGTTACCATTACTGAGTTT................................................................................... 19 0 1 3.00 3 0 0 0 3 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAAA................................................................................ 26 2 1 3.00 3 0 3 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGA................................................................................ 26 1 1 3.00 3 2 1 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTC................................................................................... 23 1 1 3.00 3 0 0 3 0 0 0 0
..................................................................AAACCGTTACCATTACTTAGTTTA.................................................................................. 24 1 1 3.00 3 1 1 0 0 1 0 0
..................................................................AAACCGTTACCATTACTGCGTTT................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0
..................................................................AAACCGTTACCATTATTGAGTTT................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0
..................................................................AAACCGTTATCATTACTGAGTTT................................................................................... 23 1 1 3.00 3 1 1 0 1 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTA................................................................................... 23 1 1 3.00 3 1 0 0 1 1 0 0
..................................................................AAACCGTTACCATTACTGATTATC.................................................................................. 24 3 1 3.00 3 0 0 1 0 0 0 2
..................................................................AGACCGTTACCATTACTGAGTT.................................................................................... 22 1 1 3.00 3 1 1 0 0 1 0 0
..................................................................AAACCGTTACCATTACT......................................................................................... 17 0 1 3.00 3 0 0 0 1 2 0 0
..................................................................AAACCGTTACCATTACTGATTTTATT................................................................................ 26 2 1 2.00 2 1 0 0 0 1 0 0
..................................................................AAACTGTTACCATTACTGAGTTT................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................AAACCGTTACCATTCCTGAGTATC.................................................................................. 24 3 1 2.00 2 0 0 2 0 0 0 0
..................................................................AAACCGTTACCCTTACTGAGTT.................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTCAGTATC.................................................................................. 24 3 1 2.00 2 0 0 0 0 0 0 2
..................................................................AAACCGTTACCATTACTGAGTTTC.................................................................................. 24 1 1 2.00 2 0 0 2 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGAATC............................................................................. 29 3 1 2.00 2 0 0 2 0 0 0 0
.............................................................AACGGAAACCGTTACCATTACTGAGTT.................................................................................... 27 2 1 2.00 2 0 1 0 1 0 0 0
...................................................................AACCGTTACCATTACTGAGTTTAGTATC............................................................................. 28 2 1 2.00 2 0 0 0 0 0 0 2
..................................................................AAACCGTTACCATTACTGTGTTT................................................................................... 23 1 1 2.00 2 1 0 0 0 1 0 0
..................................................................AAACCGTTACCGTTACTGAGTTTA.................................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................AAACCTTTACCATTACTGAGTT.................................................................................... 22 1 1 2.00 2 0 0 0 1 0 1 0
..................................................................AAACCGTTACCCTTACTGCGTTT................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0 0
..................................................................AAACCGTTACCCTTACTGAGTATC.................................................................................. 24 3 1 2.00 2 0 0 2 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAATC............................................................................... 27 2 1 2.00 2 0 0 2 0 0 0 0
..................................................................AAACCGTTACCCTTACTGAGTTT................................................................................... 23 1 1 2.00 2 0 1 0 1 0 0 0
..................................................................AAACCGTTACCATTACTGCGTT.................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTA............................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTATT.................................................................................. 24 2 2 1.50 3 0 0 3 0 0 0 0
..................................................................AAACCGTTACCATTACTGATTTTAGTATC............................................................................. 29 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAAGCGTTACCATTACTGAGTTTATC................................................................................ 26 3 1 1.00 1 0 0 0 0 0 0 1
..................................................................AAACCGTTACCATTACTGATTTTATC................................................................................ 26 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGCGT..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGGATC.................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGCGTTTA.................................................................................. 24 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................AAACCGTTACCATTACCGAGTTTAATC............................................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0
.......................................................................GTTACCATTACTGAGTT.................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................AACGTTACCATTACTGAGTT.................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATCACTGAGTT.................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
.................................................................AAAACCGTTACCATTACTGAGTTT................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGCTC.............................................................................. 28 3 1 1.00 1 0 0 0 0 0 0 1
..................................................................CAACCGTTACCATTACTGAGTATC.................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AACCCGTTACCATTACTGAGT..................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCATTACTTATTTTA.................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
..................................................................AAACCGTTACCATTACTGAGTTTT.................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAA...................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................AACCGTTACCATTACTGAGTTT................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................CGTTACCATTACTGAGTTTAT................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................GACGGAAACCGTTACCATTACTGAGT..................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTCACCATTACTGAG...................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................TAATGGTAAGGGTTCTCTTGCATC......................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAAACGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................AAACCGTTAGCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCTTTACCATTACTGAGTTTATC................................................................................ 26 3 2 1.00 2 0 0 0 0 0 0 2
..................................................................AAACCGTTACCATTACTGAGA..................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCGTTACCATTAATGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTTCTGAGTTTAA................................................................................. 25 2 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACTATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTCCCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTCTC.................................................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTGA.................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................AACCGTTACCATTACTGAGTATC.................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................ACCGTTACCATTACTGAGTTTAGTATC............................................................................. 27 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACCGAGTTT................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................AAACCTTACCATTACTGAGTTTAGT................................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTAT................................................................................... 23 1 1 1.00 1 0 0 0 0 0 0 1
..................................................................AAACCGTTACTATTACTGAGTATC.................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTCAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTGGA................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0 0
..................................................................AAACCGTTACCATTACTGAGTTTG.................................................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0
..................................................................AAACCGTTAACATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTAC.......................................................................................... 16 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCATTCCTGAGTTTATC................................................................................ 26 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTGCCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCTTTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTCCTGAGTTTAATC............................................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0
......................................................................CGTTACCATTACTGAGTTTA.................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATCACTGCGTT.................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTATCATTACTGAGCT.................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCCTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGACTTTAGT................................................................................ 26 1 1 1.00 1 0 0 0 0 1 0 0
..................................................................AAAGCGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCATTCCTGAGTTTC.................................................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................ACACCGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCACTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTC............................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATAACTGAGTTA................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTGCCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCTTTACTGAGTTTAATC............................................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTTAGTTTAT................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGCGTTTATC................................................................................ 26 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTAATGAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCGTTACTGAGTTTAGT................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTGCCATTACTGAGTATC.................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTAAA................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTTTATT................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACGATTACTGAGTT.................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................AAACCGTTACCATTACTG........................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAT...................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................GAACCGTTACCATTACTGAGTTT................................................................................... 23 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................AAACCGTTACCATTACTGAGTTTAGTTC.............................................................................. 28 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTAACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGCTACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCACTACTGAGTTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATCACTGAGT..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTAAGTTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGCTACCATTACTGAGTTTA.................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACTGTTACCATTACTGAGTT.................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................AAACCGTTATCATTACTGAGT..................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTCCCATTACTGAGTATC.................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGAATTTAG................................................................................. 25 1 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAACCGTTACCATTACTGAGCTT................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTACTGAGTAC................................................................................... 23 2 1 1.00 1 0 0 0 0 0 0 1
..................................................................AAACCGTTACCATTACTGAGTTTCATAAC............................................................................. 29 3 1 1.00 1 0 1 0 0 0 0 0
....................................................................ACCGTTACCATTACTGAGTTTAC................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGCGTTTAA................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTATTGAGTT.................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
..................................................................AAACCGTTACCATTACTTATTT.................................................................................... 22 2 4 0.75 3 1 1 0 0 0 1 0
..................................................................AAACCGTTACTGTTACTGAGTTT................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................AAACCGTTACCATTTCTGTGTT.................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................AAACAGTTACCATTACTGATTTT................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0
..................................................................AAACCGTTATCATTACTGAGATC................................................................................... 23 3 2 0.50 1 0 0 1 0 0 0 0
..................................................................TAACCGTTACCATTACTGAGTATC.................................................................................. 24 3 2 0.50 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTCCTGAGATC................................................................................... 23 3 3 0.33 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTTCTGAGTATC.................................................................................. 24 3 3 0.33 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTTATT..................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0 0
..................................................................AAACCGTTATCATTACTGATT..................................................................................... 21 2 5 0.20 1 0 1 0 0 0 0 0
..................................................................AAACCTTTACCATTACTGAGATC................................................................................... 23 3 6 0.17 1 0 0 1 0 0 0 0
......................................................................CGTTACCATTACTGAGTATC.................................................................................. 20 2 6 0.17 1 0 0 1 0 0 0 0
..................................................................AAACCGTTACCATTACTGTA...................................................................................... 20 2 10 0.10 1 0 0 0 0 1 0 0
................................................................TTAAACCGTTACCATTACTGATT..................................................................................... 23 3 11 0.09 1 1 0 0 0 0 0 0

Anti-sense strand reads

GGGTTCTTCGAGAGGCGAGTCGGACAGTGTCGGATGACTGACGGTCCCGTGAACCCTTACCGTTCCTTTGGCAATGGTAATGACTCAAATCATTACCATTCCCAAGAGAACGATATAGGTCTTTTGCACGGTCCTTCTCTTGAGTCCTGGGACCTCGACTGATGACCCTCTG

***********************************.......((..((((((((((.(((((((((.((((.((((((((((((....)))))))))))).)))).))))))))).))))).....))))).))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle
............................................................................................TTACCATTCCCAAGAGAACGAT.......................................................... 22 0 1 1.00 1 1

Generated: 09/01/2015 at 12:12 PM