ID:

mml-mir-4446

 Coordinate:

chr2:33687749-33687858 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.8 -37.6

Sense Strand Reads

TGCTTAATCAAGAAAGAGACTCCTAGCTCTGGAAGTTGAGCCAAAATATGTACTTCAGGATTGATGAGTCCGGTGGCTCTGGTCCATTTCCCTGCCATTCCCTTGGCTTCAATTTACTCCCAGGGCTGGCAGTGAGATGGGTCAAGGCTCACACCTTCACCTGACAACACCAGAGGGAAGGACCTTTTCAGAAGCCCTCAGCAACTTCTT

**********************************************************************..((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).))).))).....***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116841

prostate		 SRR116839

testes
........................................................................................................................CAGGGCTGGCAGTGAGATGGGT.................................................................... 22 0 1 3951.00 3951 3078 544 292 35 2
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAT.................................................................. 24 2 1 1136.00 1136 836 187 102 9 2
........................................................................................................................CAGGGCTGGCAGTGAGATGGG..................................................................... 21 0 1 1011.00 1011 688 212 105 5 1
........................................................................................................................CAGGGCTGGCAGTGAGATGG...................................................................... 20 0 1 833.00 833 486 181 160 6 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAA.................................................................. 24 1 1 674.00 674 403 145 119 6 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTA................................................................... 23 1 1 672.00 672 428 141 96 7 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGA.................................................................... 22 1 1 653.00 653 382 157 104 9 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTT................................................................... 23 1 1 653.00 653 441 118 85 8 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTT.................................................................. 24 2 1 634.00 634 471 113 43 7 0
........................................................................................................................CAGGGCTGGCAGTGAGATG....................................................................... 19 0 1 460.00 460 132 116 204 7 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAA................................................................... 23 2 1 424.00 424 220 121 73 10 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGA..................................................................... 21 1 1 368.00 368 153 129 81 5 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGT..................................................................... 21 1 1 326.00 326 196 70 54 6 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTT................................................................... 22 1 1 252.00 252 191 27 30 4 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTA.................................................................. 24 1 1 138.00 138 78 37 22 1 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTT.................................................................. 23 2 2 129.50 259 187 47 21 3 1
.........................................................................................................................AGGGCTGGCAGTGAGATGGGT.................................................................... 21 0 1 125.00 125 95 19 11 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAAA.................................................................. 24 2 1 123.00 123 70 29 22 2 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAT.................................................................. 23 2 1 109.00 109 68 22 16 3 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGG.................................................................... 22 1 1 108.00 108 64 39 5 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAA.................................................................. 23 1 1 103.00 103 59 20 23 0 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTTT................................................................. 25 3 2 93.00 186 154 18 10 3 1
........................................................................................................................CAGGGCTGGCAGTGAGATGGAA.................................................................... 22 2 3 91.33 274 75 120 71 8 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGG...................................................................... 21 0 1 83.00 83 60 12 9 2 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTA.................................................................. 23 1 1 82.00 82 44 26 11 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTATT................................................................. 25 3 1 80.00 80 68 10 1 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTAT................................................................. 25 2 1 73.00 73 58 8 5 2 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAT................................................................... 23 2 3 69.67 209 122 52 32 3 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAT................................................................. 24 2 1 65.00 65 47 11 7 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGG..................................................................... 22 0 1 59.00 59 53 5 0 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGT...................................................................... 20 1 2 57.00 114 55 40 18 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGA...................................................................... 20 1 4 56.00 224 49 76 96 2 1
........................................................................................................................CAGGGCTGGCAGTGAGATTGGT.................................................................... 22 1 1 55.00 55 43 4 4 4 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTT.................................................................... 22 1 1 53.00 53 27 13 12 1 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTA................................................................... 22 1 1 49.00 49 27 11 11 0 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGT.................................................................... 22 1 1 48.00 48 37 8 2 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAA................................................................. 25 1 1 45.00 45 24 9 11 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAT................................................................. 25 2 1 45.00 45 29 7 8 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTA.................................................................... 22 2 2 44.50 89 42 14 32 1 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATG....................................................................... 20 0 1 40.00 40 16 9 14 1 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAA................................................................. 24 1 1 38.00 38 14 14 9 1 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGT.................................................................... 23 0 1 37.00 37 31 5 1 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGA..................................................................... 22 1 1 37.00 37 20 7 8 2 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGA.................................................................... 23 1 1 35.00 35 24 6 5 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAG.................................................................. 24 2 1 32.00 32 16 10 5 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTAA................................................................. 25 1 1 31.00 31 14 7 9 1 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGGT.................................................................... 22 1 1 29.00 29 18 9 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTTA................................................................. 25 2 1 28.00 28 16 4 7 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGAA.................................................................. 24 2 2 26.50 53 23 22 8 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGAT.................................................................... 22 1 1 26.00 26 11 7 8 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGT................................................................... 23 2 1 26.00 26 14 10 2 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGT..................................................................... 22 1 1 25.00 25 18 2 5 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTGT.................................................................... 22 1 1 23.00 23 22 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTT................................................................... 23 2 1 23.00 23 19 2 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGAT........................................................................ 18 0 2 21.50 43 24 10 9 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTATA................................................................. 25 2 1 20.00 20 18 1 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAAAA................................................................. 25 2 1 20.00 20 11 4 5 0 0
........................................................................................................................CAGGGCTGGCAGTTAGATGGGT.................................................................... 22 1 1 17.00 17 14 3 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGAT.................................................................. 24 3 8 15.13 121 67 48 5 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAAT.................................................................. 24 3 8 15.00 120 51 45 23 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGA................................................................... 23 2 4 14.00 56 24 25 7 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTA................................................................... 23 2 1 14.00 14 9 4 1 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGT.................................................................... 22 1 1 14.00 14 13 1 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTTA................................................................. 24 2 1 13.00 13 5 4 4 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGA.................................................................... 21 1 1 13.00 13 10 1 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGG...................................................................... 19 0 1 13.00 13 6 6 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGG..................................................................... 20 0 1 13.00 13 10 3 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGTT.................................................................... 23 1 1 12.00 12 6 3 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGATA.................................................................. 24 2 1 11.00 11 5 5 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATA....................................................................... 19 1 6 10.67 64 32 10 22 0 0
........................................................................................................................CAGGGCTGGCAGTGAGCTGGGT.................................................................... 22 1 1 10.00 10 10 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAAA................................................................. 24 1 1 10.00 10 4 4 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAAT................................................................. 24 2 1 10.00 10 5 2 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGT.................................................................. 24 2 1 10.00 10 8 1 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTATAA................................................................ 26 3 1 10.00 10 3 6 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTG................................................................... 23 1 1 9.00 9 3 2 3 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGTT.................................................................. 24 3 4 9.00 36 21 11 4 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAAA................................................................ 25 2 1 9.00 9 5 2 1 1 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGAT.................................................................... 23 1 1 9.00 9 4 3 1 1 0
........................................................................................................................CAGGGCTGGCACTGAGATGGGT.................................................................... 22 1 1 9.00 9 9 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGAA.................................................................... 23 2 1 9.00 9 5 2 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGAAA................................................................... 23 3 16 8.31 133 41 49 42 1 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGGT.................................................................... 22 1 1 8.00 8 6 0 2 0 0
........................................................................................................................CAGGGCTGGAAGTGAGATGGGT.................................................................... 22 1 1 7.00 7 6 1 0 0 0
........................................................................................................................CAGGGCTGTCAGTGAGATGGGT.................................................................... 22 1 1 7.00 7 7 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTT................................................................... 23 2 1 7.00 7 2 1 4 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTAA.................................................................. 24 2 1 7.00 7 5 0 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTA................................................................... 23 2 1 7.00 7 6 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGG..................................................................... 21 1 2 6.50 13 8 0 5 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGA...................................................................... 21 1 1 6.00 6 0 2 4 0 0
........................................................................................................................CAGGGCTGGCAGTGAGACGGGT.................................................................... 22 1 1 6.00 6 5 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGA.................................................................. 24 1 1 6.00 6 4 2 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATG....................................................................... 18 0 1 6.00 6 2 1 3 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGT.................................................................... 22 1 1 6.00 6 6 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGTA.................................................................... 23 2 1 6.00 6 1 3 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAAA................................................................ 26 2 1 6.00 6 1 1 4 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAGA................................................................. 25 2 1 6.00 6 4 1 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTG.................................................................. 24 2 1 6.00 6 4 2 0 0 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGG..................................................................... 21 1 4 5.75 23 18 5 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAAAT................................................................. 25 3 2 5.50 11 7 1 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTG..................................................................... 21 1 2 5.50 11 9 1 0 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGC..................................................................... 21 1 3 5.33 16 12 3 0 1 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGTTT.................................................................. 25 2 1 5.00 5 5 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGATAA................................................................. 25 2 1 5.00 5 2 1 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTC.................................................................. 24 2 1 5.00 5 5 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTGTAA.................................................................. 24 2 1 5.00 5 3 0 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAGT................................................................. 25 3 2 5.00 10 7 1 1 1 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTGTA................................................................... 23 2 1 5.00 5 5 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTTAT................................................................ 26 3 1 5.00 5 3 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTATA................................................................. 24 2 1 5.00 5 2 0 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGCT.................................................................... 22 1 2 4.50 9 5 3 0 1 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGGT................................................................... 22 2 2 4.50 9 7 2 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGT...................................................................... 21 1 2 4.50 9 5 1 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGA......................................................................... 17 0 6 4.33 26 8 11 7 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTAT.................................................................. 24 3 3 4.33 13 9 1 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTG...................................................................... 20 1 3 4.33 13 8 1 4 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAC.................................................................. 24 2 1 4.00 4 2 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGTAA.................................................................. 24 2 1 4.00 4 3 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGTT................................................................... 24 1 1 4.00 4 2 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTTAT................................................................ 25 3 1 4.00 4 2 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGTT................................................................... 23 2 1 4.00 4 2 0 2 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGTTT................................................................... 24 2 1 4.00 4 4 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTTAA................................................................ 26 3 1 4.00 4 1 1 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAAT................................................................ 26 2 1 4.00 4 1 2 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAG................................................................... 23 2 3 4.00 12 5 3 4 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGC.................................................................... 22 1 1 4.00 4 3 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGTA.................................................................. 24 2 1 4.00 4 2 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAG.................................................................. 23 2 1 4.00 4 0 2 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTTAA................................................................ 25 3 1 4.00 4 1 2 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGA..................................................................... 20 1 2 4.00 8 5 2 1 0 0
........................................................................................................................CAGGGCTGGCAATGAGATGGGT.................................................................... 22 1 1 4.00 4 3 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTATAT................................................................ 26 3 1 4.00 4 2 2 0 0 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGGTAA.................................................................. 24 2 1 4.00 4 2 1 0 0 1
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTATT................................................................. 24 3 2 3.50 7 5 2 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGGTA.................................................................. 23 2 2 3.50 7 4 3 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTAT................................................................... 23 3 18 3.39 61 38 13 10 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTATT................................................................ 26 3 1 3.00 3 2 0 1 0 0
........................................................................................................................CAGGGCTGGCAGAGAGATGGGT.................................................................... 22 1 1 3.00 3 0 2 1 0 0
........................................................................................................................CAGGGCTGGCAGTTAGATGGGTT................................................................... 23 2 1 3.00 3 2 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGAA................................................................... 24 2 1 3.00 3 3 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTC................................................................... 23 0 1 3.00 3 0 2 1 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGG...................................................................... 20 1 1 3.00 3 3 0 0 0 0
........................................................................................................................CAGGGCTGTCAGTGAGATGGGTA................................................................... 23 2 1 3.00 3 2 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTAT.................................................................. 24 3 1 3.00 3 1 1 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGATT................................................................... 23 2 1 3.00 3 1 0 1 1 0
........................................................................................................................CAGGGCTGGCACTGAGATGGGTT................................................................... 23 2 1 3.00 3 3 0 0 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGTA................................................................... 23 2 1 3.00 3 3 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGTTT.................................................................. 24 3 2 3.00 6 3 2 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTTT.................................................................. 24 3 3 3.00 9 2 2 3 2 0
........................................................................................................................CAGGGCTGGCAGTGAGCTGGGTA................................................................... 23 2 1 3.00 3 1 1 1 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGG.................................................................... 23 1 1 3.00 3 2 1 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATTGGT.................................................................... 21 1 1 3.00 3 1 0 2 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGAT................................................................... 24 2 1 3.00 3 1 1 1 0 0
........................................................................................................................CAGGGCTGGCAGTTAGATGGGTAA.................................................................. 24 2 1 3.00 3 2 0 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTATT................................................................ 25 3 1 3.00 3 2 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATA....................................................................... 20 1 1 3.00 3 1 0 2 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTAA.................................................................. 24 2 1 3.00 3 0 2 1 0 0
.....................................................................................................................TCCCAGGGCTGGCAGTGAGATA....................................................................... 22 1 1 3.00 3 2 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATT....................................................................... 19 1 8 2.75 22 10 3 9 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAATA................................................................. 25 3 3 2.67 8 1 3 4 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGTAT.................................................................. 24 3 3 2.67 8 7 1 0 0 0
........................................................................................................................CAGGGCTGGCACTGAGATGGGTAT.................................................................. 24 3 2 2.50 5 5 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGGTT................................................................... 23 2 2 2.50 5 4 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTTT.................................................................. 24 3 4 2.50 10 8 2 0 0 0
.......................................................................................................................CCAGGGCTGGCAGGGAGATGGG..................................................................... 22 1 2 2.50 5 2 2 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAGAA................................................................ 26 3 1 2.00 2 0 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTGA.................................................................. 23 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAAAA............................................................... 27 3 1 2.00 2 0 0 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTC................................................................... 22 0 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTTGCAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CATGGCTGGCAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTAT.................................................................... 22 2 2 2.00 4 0 1 3 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGAT..................................................................... 22 2 1 2.00 2 0 1 1 0 0
........................................................................................................................CAGGGTTGGCAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGCTGGGTAA.................................................................. 24 2 1 2.00 2 1 0 1 0 0
........................................................................................................................CAGGGCTGTCAGTGAGATGGG..................................................................... 21 1 1 2.00 2 1 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGTAA.................................................................. 25 1 1 2.00 2 1 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGAGA.................................................................. 24 2 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCGGGCAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGAAA................................................................. 25 2 2 2.00 4 0 1 3 0 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGGTAT.................................................................. 24 3 3 2.00 6 4 2 0 0 0
........................................................................................................................CAGGGCTGACAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 1 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGGTA................................................................... 23 2 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATG....................................................................... 19 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGGTAT................................................................. 25 3 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTCA.................................................................. 24 0 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGAACA.................................................................. 24 2 1 2.00 2 0 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGGTAA.................................................................. 24 2 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGCCAGTGAGATGGGTA................................................................... 23 2 1 2.00 2 1 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGTA................................................................... 24 1 1 2.00 2 1 0 1 0 0
.......................................................................................................................CCAGGGCTGGCAGGGAGATGGGT.................................................................... 23 1 1 2.00 2 0 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGATATGGGT.................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGAAT.................................................................... 22 2 3 2.00 6 0 2 4 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGGT................................................................... 24 2 1 2.00 2 2 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGAT........................................................................ 19 0 1 2.00 2 1 0 1 0 0
........................................................................................................................CAGGGCTGGCACTGAGATGGGTA................................................................... 23 2 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGTTAT................................................................. 25 3 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGAT................................................................. 25 2 1 2.00 2 0 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATCGGTAT.................................................................. 24 3 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGACGGGTA................................................................... 23 2 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGACATGGGTA................................................................... 23 2 1 2.00 2 2 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGTT.................................................................... 21 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATAG...................................................................... 20 1 2 2.00 4 1 2 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAG................................................................. 25 2 1 2.00 2 0 2 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGG..................................................................... 21 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTCT................................................................. 25 3 2 2.00 4 3 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAAATGGGT.................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGTTTA.................................................................. 24 2 1 2.00 2 0 1 1 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGG..................................................................... 21 1 1 2.00 2 1 0 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGT..................................................................... 20 1 2 2.00 4 2 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGAAA.................................................................. 23 2 2 2.00 4 2 0 2 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGATT................................................................... 24 2 1 2.00 2 0 1 1 0 0
.........................................................................................................................AGGGCTGGCAGTGGGATGGGTT................................................................... 22 2 1 2.00 2 1 1 0 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGTT................................................................... 23 2 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGTA................................................................. 25 2 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGGTT................................................................... 23 2 2 2.00 4 0 3 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAAT................................................................ 25 2 1 2.00 2 0 1 1 0 0
........................................................................................................................CAGGGCTGCCAGTGAGATGGGT.................................................................... 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGCA.................................................................... 22 2 6 1.83 11 7 1 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTA..................................................................... 21 2 13 1.77 23 6 10 5 2 0
........................................................................................................................CAGGGCTGGCAGTTAGATGG...................................................................... 20 1 4 1.75 7 2 3 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGGTT.................................................................. 23 3 13 1.69 22 12 10 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGG...................................................................... 20 1 3 1.67 5 4 0 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGAA................................................................... 22 2 4 1.50 6 2 2 2 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGA.................................................................... 22 2 2 1.50 3 3 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATTG...................................................................... 21 1 2 1.50 3 2 0 0 1 0
.......................................................................................................................CCAGGGCTGGCAGTGAGA......................................................................... 18 0 2 1.50 3 2 0 1 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGTT................................................................... 23 2 2 1.50 3 3 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGG.................................................................... 21 1 2 1.50 3 2 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTGTT................................................................... 23 2 2 1.50 3 3 0 0 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGG..................................................................... 21 1 2 1.50 3 3 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGTTT................................................................... 22 2 3 1.33 4 4 0 0 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGTAT.................................................................. 24 3 5 1.20 6 6 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGAT..................................................................... 21 2 10 1.10 11 2 3 6 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGTT..................................................................... 21 2 11 1.09 12 8 2 2 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATTGGTTAA................................................................. 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGCAAT................................................................. 25 3 1 1.00 1 1 0 0 0 0
.....................................................................................ATTTCCCTGCCATTCCCTTGG........................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGACT.................................................................. 25 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGCGTAA.................................................................. 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAATT................................................................ 26 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGACATGG...................................................................... 21 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATGGGAAA.................................................................. 25 2 1 1.00 1 1 0 0 0 0
.......................................................................................................................CCCGGGCTGGCAGTGAGATGGTT.................................................................... 23 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTATG................................................................. 25 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................ACAGGGCTGGCAGTGAGATGGGT.................................................................... 23 1 1 1.00 1 1 0 0 0 0
......................................................................................................................CCCAGGGCTGGCAGTGAGATGGGT.................................................................... 24 0 1 1.00 1 0 0 1 0 0
........................................................................................................................GAGGGCTGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 0 0 1 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAAC................................................................ 25 2 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGAA................................................................. 25 1 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCTGGCAGGGAGATGGGTAAA................................................................. 25 2 1 1.00 1 0 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGACA.................................................................. 24 1 1 1.00 1 0 0 1 0 0
........................................................................................................................CAGGGCTAGCAGTGAGATGGG..................................................................... 21 1 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCTGGCAGCGAGATGGGTT................................................................... 23 2 1 1.00 1 0 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATTGGT.................................................................... 23 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCCGGCAGTGAGATGGGTTT.................................................................. 24 3 1 1.00 1 0 0 0 1 0
........................................................................................................................CAGGGCTGGCAGTGGGATGGGTAAA................................................................. 25 2 1 1.00 1 0 1 0 0 0
........................................................................................................................CAAGGCTGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGAGCTGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTAC................................................................. 24 2 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTTGCAGTGAGATGGGT.................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGGTGGGTAAA................................................................. 25 2 1 1.00 1 0 1 0 0 0
.......................................................................................................................ACAGGGCTGGCAGTGAGATGGGTAT.................................................................. 25 3 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTTGA................................................................. 24 2 1 1.00 1 0 1 0 0 0
........................................................................................................................TAGGGCTGGCAGTGAGATGGGTAA.................................................................. 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTAGCAGTGAGATGGGTAA.................................................................. 24 2 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCTGGCAGAGAGATGGG..................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CACGGCTGGCAGTGAGATGGGA.................................................................... 22 2 1 1.00 1 0 0 1 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGA.................................................................... 22 2 3 1.00 3 2 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGAGAAGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCCGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGTGCTGGCAGTGAGATGGG..................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGCGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGGGAGATGGGTT................................................................... 22 2 3 1.00 3 0 3 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTTAAA................................................................ 26 2 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGCGAGATGGGT.................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGTA................................................................... 23 2 2 1.00 2 2 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTAAA................................................................. 25 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGTAGTGAGATGGGTCT.................................................................. 24 2 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTAC.................................................................. 23 2 1 1.00 1 0 1 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTCT.................................................................. 23 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................AGGGCTGGCAGTGAGATGGGTATAA................................................................ 25 3 1 1.00 1 0 0 1 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATTGGTT................................................................... 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGCGATGGGTT................................................................... 23 2 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTGTAG................................................................ 26 2 1 1.00 1 0 1 0 0 0
........................................................................................................................CAGGGCAGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTAAGATGGGTAA.................................................................. 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CATGGCTGGCAGTGAGATGGG..................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGCTA................................................................... 23 2 2 1.00 2 1 1 0 0 0
.......................................................................................................................CCAGGGCTGGCAGTGAGATT....................................................................... 20 1 4 1.00 4 1 0 3 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTACT................................................................. 25 3 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGTCAGTGAGATGG...................................................................... 20 1 1 1.00 1 0 0 1 0 0
........................................................................................................................CGGGGCTGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGCGTA................................................................... 23 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATTGGTTA.................................................................. 24 2 1 1.00 1 0 0 1 0 0
........................................................................................................................CAGGCCTGGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCAGTGAGATGGGTAAGA................................................................ 26 3 1 1.00 1 0 0 1 0 0
........................................................................................................................CAGGGCTGGCAGTGATATGGG..................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTGGCATTGAGATGGGTAA.................................................................. 24 2 1 1.00 1 1 0 0 0 0
........................................................................................................................CAGGGCTCGCAGTGAGATGGGT.................................................................... 22 1 1 1.00 1 0 1 0 0 0
.........................................................................................................................AGGGCTGGCAGCGAGATGGGTT................................................................... 22 2 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

ACGAATTAGTTCTTTCTCTGAGGATCGAGACCTTCAACTCGGTTTTATACATGAAGTCCTAACTACTCAGGCCACCGAGACCAGGTAAAGGGACGGTAAGGGAACCGAAGTTAAATGAGGGTCCCGACCGTCACTCTACCCAGTTCCGAGTGTGGAAGTGGACTGTTGTGGTCTCCCTTCCTGGAAAAGTCTTCGGGAGTCGTTGAAGAA

*****************************************************..((((((.(((((((((((.((((((...((((((.............)))))).)))))).))))))))))).))).))).....********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate		 SRR116843

cortex		 SRR116844

epididymis
..................................................................................AGGTAAAGGGACGGTAAGGGAA.......................................................................................................... 22 0 1 2.00 2 1 1 0
................................................................................ACAGGTAAAGGGACGGTAAGGGAA.......................................................................................................... 24 1 1 1.00 1 1 0 0
...................................................................................GGTAAAGGGACGGTAAGGGAA.......................................................................................................... 21 0 1 1.00 1 0 1 0
.......................................................................................................................................CTACCCAGTTCGGAGTG.......................................................... 17 1 4 0.50 2 0 0 2
.......................................................................................................................................CTACGCAGTTCCGAGTG.......................................................... 17 1 6 0.17 1 0 0 1

Generated: 09/01/2015 at 12:18 PM