ID:

mml-mir-429

Coordinate:

chr1:4386862-4386944 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.5 -39.5 -39.3

Sense Strand Reads

CCCAGGGCCTTCCCTTCACAGGCCCTGCAGACACCAGCCCAGGACCCGGCCGCCGGCCGATGAGCGTCTTACCAGACACGGTTAGACCTGGCTCTCTGTCTAATACTGTCTGGTAAAACCGTCCATCCGCGGCCTGATCACCGTTAGAGGAGAGAGCTGCCTGCCCTGCAGCTCATCAGTGTG

***********************************.(((........))).(((.((.((((.(((..((((((((((..(((((((..........)))))))..))))))))))...))).)))).)))))(((((....))))).***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis
SRR116842

seminal vesicle
SRR116840

epididymis
SRR116841

prostate
SRR116844

epididymis
SRR116839

testes
....................................................................................................TAATACTGTCTGGTAAAACCGTATC.......................................................... 25 3 1 8755.00 8755 8210 0 0 0 545 0
....................................................................................................TAATACTGTCTGGTAAAACCGT............................................................. 22 0 1 4196.00 4196 0 2512 872 792 0 20
....................................................................................................TAATACTGTCTGGTAAAACCG.............................................................. 21 0 1 2913.00 2913 1 1718 1000 193 0 1
....................................................................................................TAATACTGTCTGGTAAAACCGATC........................................................... 24 2 1 1447.00 1447 1326 0 0 0 121 0
....................................................................................................TAATACTGTCTGGTAAAACCGA............................................................. 22 1 1 297.00 297 5 175 90 26 0 1
....................................................................................................TAATACTGTCTGGTAAAACCGTT............................................................ 23 1 1 99.00 99 0 42 21 36 0 0
....................................................................................................TAATACTGTCTGGTAAAACCATC............................................................ 23 1 1 79.00 79 73 0 0 0 6 0
....................................................................................................TAATACTGTCTGGTAAAACCGTCTC.......................................................... 25 2 1 56.00 56 54 0 0 0 2 0
....................................................................................................TAATACTGTCTGGTAAAACCGTA............................................................ 23 1 1 49.00 49 21 13 9 4 2 0
.....................................................................................................AATACTGTCTGGTAAAACCGT............................................................. 21 0 1 48.00 48 0 22 19 7 0 0
....................................................................................................TAATACTGTCTGGGAAAACCG.............................................................. 21 1 1 48.00 48 0 36 12 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTATC.......................................................... 24 3 1 41.00 41 36 0 0 0 5 0
....................................................................................................TAATACTGTCTGGTAAAA................................................................. 18 0 1 38.00 38 18 8 7 1 4 0
....................................................................................................TAATACTGTCTGGGAAAACCGT............................................................. 22 1 1 38.00 38 0 31 4 3 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCG.............................................................. 22 0 1 33.00 33 0 24 7 2 0 0
....................................................................................................TAATACTGTCTGGTAAAACC............................................................... 20 0 1 33.00 33 0 19 10 4 0 0
....................................................................................................TAATACTGTCTGGTAAAAACGT............................................................. 22 1 1 32.00 32 0 15 14 3 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTT............................................................ 22 1 1 29.00 29 0 14 10 5 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCGTATC.......................................................... 26 3 1 26.00 26 24 0 0 0 2 0
....................................................................................................TAATACTGTCTTGTAAAACCGT............................................................. 22 1 1 25.00 25 0 0 11 13 0 1
...................................................................................................CTAATACTGTCTGGTAAAACCGT............................................................. 23 0 1 23.00 23 0 14 5 4 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTTC.......................................................... 25 3 1 20.00 20 19 0 0 0 1 0
...................................................................................................CTAATACTGTCTGGTAAAACCGATC........................................................... 25 2 1 19.00 19 18 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTT........................................................... 24 2 1 19.00 19 0 1 2 16 0 0
....................................................................................................TAATACTGTCTGGTAAAAACG.............................................................. 21 1 1 17.00 17 0 11 5 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCA.............................................................. 21 1 1 14.00 14 0 8 3 3 0 0
....................................................................................................TAATACTGTCTTGTAAAACCG.............................................................. 21 1 1 14.00 14 0 0 13 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCTT............................................................. 22 1 1 14.00 14 0 1 7 6 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTAC........................................................... 24 1 1 14.00 14 14 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTAT........................................................... 24 2 1 14.00 14 11 1 1 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCT.............................................................. 21 1 1 13.00 13 0 6 6 1 0 0
....................................................................................................TAATACTGTCTGGTAAAAC................................................................ 19 0 1 13.00 13 0 7 5 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGCTC........................................................... 24 2 1 13.00 13 12 0 0 0 1 0
....................................................................................................TAATACTGTCTGTTAAAACCGT............................................................. 22 1 1 13.00 13 0 0 10 3 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTA............................................................ 22 1 1 12.00 12 0 5 6 1 0 0
.....................................................................................................AATACTGTCTGGTAAAACCG.............................................................. 20 0 1 11.00 11 0 5 6 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACA............................................................... 20 1 1 11.00 11 0 8 2 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTC........................................................... 24 1 1 11.00 11 10 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACCGTATT.......................................................... 25 3 1 10.00 10 9 0 0 0 1 0
....................................................................................................TAATACTTTCTGGTAAAACCGT............................................................. 22 1 1 10.00 10 0 0 3 6 0 1
....................................................................................................TAATACTGTCTGGTAACACCGATC........................................................... 24 3 1 9.00 9 7 0 0 0 2 0
....................................................................................................TAATACTGTCTTGTAAAACCGATC........................................................... 24 3 1 9.00 9 9 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTAT........................................................... 22 2 1 8.00 8 0 7 0 1 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTTT........................................................... 22 2 2 8.00 16 0 7 7 2 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGG............................................................. 22 1 1 8.00 8 0 5 2 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTAA........................................................... 24 2 1 8.00 8 0 3 1 4 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGG............................................................. 22 2 1 7.00 7 0 7 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACAATC............................................................ 23 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTA............................................................ 21 1 1 7.00 7 0 3 4 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGACC........................................................... 24 1 1 6.00 6 6 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTT............................................................ 21 1 1 6.00 6 0 0 3 3 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTATCT......................................................... 26 3 1 6.00 6 6 0 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTAA........................................................... 23 2 1 6.00 6 0 3 2 1 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGATC........................................................... 23 2 1 6.00 6 6 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAACCCGATC........................................................... 24 3 1 5.00 5 5 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTG............................................................ 23 1 1 5.00 5 0 3 2 0 0 0
....................................................................................................TAATACTGTCTGTTAAAACCG.............................................................. 21 1 1 5.00 5 0 0 4 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACT............................................................... 20 1 1 5.00 5 0 4 0 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGTATC........................................................ 27 2 1 5.00 5 4 0 0 0 1 0
....................................................................................................TAATACTGTCTGCTAAAACCGATC........................................................... 24 3 1 5.00 5 5 0 0 0 0 0
....................................................................................................TAATACTTTCTGGTAAAACCG.............................................................. 21 1 1 5.00 5 0 1 3 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGACTC.......................................................... 25 3 1 4.00 4 3 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACCGAA............................................................ 23 2 1 4.00 4 0 3 1 0 0 0
.................................................................GTCTTACCAGACACGGTTAGAATC.............................................................................................. 24 3 1 4.00 4 3 0 0 0 1 0
....................................................................................................CAATACTGTCTGGTAAAACCGT............................................................. 22 1 1 4.00 4 0 3 1 0 0 0
....................................................................................................TAATACTGTCTGGCAAAACCG.............................................................. 21 1 1 4.00 4 0 0 4 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGATC........................................................... 24 3 3 4.00 12 11 0 0 0 1 0
....................................................................................................AAATACTGTCTGGTAAAACCG.............................................................. 21 1 1 4.00 4 0 3 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGATCT.......................................................... 25 3 1 4.00 4 4 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAAC........................................................... 24 2 1 4.00 4 3 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACAG.............................................................. 21 1 1 4.00 4 0 0 3 1 0 0
....................................................................................................TAATCCTGTCTGGTAAAACCGATC........................................................... 24 3 1 4.00 4 4 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTA........................................................... 24 2 1 4.00 4 0 0 0 4 0 0
....................................................................................................TAATACTGTCTGGTAACACCG.............................................................. 21 1 1 4.00 4 0 2 2 0 0 0
....................................................................................................TAATACTGTCTGGTACAACCGT............................................................. 22 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................TAATACTGTCTGGTGAAACCGT............................................................. 22 1 1 3.00 3 0 1 2 0 0 0
....................................................................................................TAATACTGTTTGGTAAAACCGATC........................................................... 24 3 1 3.00 3 3 0 0 0 0 0
....................................................................................................TAATACTGTCCGGTAAAACCGT............................................................. 22 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGA............................................................. 22 2 2 3.00 6 0 3 3 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTAGATC........................................................ 27 2 1 3.00 3 3 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTATC.......................................................... 23 3 1 3.00 3 3 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTAA........................................................... 22 2 1 3.00 3 0 2 0 1 0 0
....................................................................................................TAATACTGTCTGGAAAAACCG.............................................................. 21 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACTGT............................................................. 22 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................TAATACTGCCTGGTAAAACCG.............................................................. 21 1 1 3.00 3 0 2 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAAT........................................................... 24 3 1 3.00 3 3 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTACC.......................................................... 25 2 1 3.00 3 3 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTTA........................................................... 22 2 1 3.00 3 0 2 1 0 0 0
....................................................................................................TATTACTGTCTGGTAAAACCGT............................................................. 22 1 1 3.00 3 0 2 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGATT........................................................... 24 3 2 3.00 6 6 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTATA.......................................................... 25 2 1 3.00 3 3 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAT............................................................ 23 2 1 3.00 3 1 1 1 0 0 0
....................................................................................................TGATACTGTCTGGTAAAACCGT............................................................. 22 1 1 3.00 3 0 2 0 1 0 0
....................................................................................................TAATCCTGTCTGGTAAAACCG.............................................................. 21 1 1 3.00 3 0 3 0 0 0 0
....................................................................................................TAATACTGTCTGGTACAACCGATC........................................................... 24 3 2 3.00 6 6 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTACAACCG.............................................................. 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCAATC........................................................... 24 3 2 2.00 4 4 0 0 0 0 0
....................................................................................................TAATACTGTTTGGTAAAACCG.............................................................. 21 1 1 2.00 2 0 1 1 0 0 0
....................................................................................................TAATACTGTCTGGGAAAAACGT............................................................. 22 2 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGC............................................................. 22 1 1 2.00 2 0 1 0 1 0 0
....................................................................................................TAATACTGTCTGGTCAAACCGT............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCATC............................................................ 24 1 1 2.00 2 2 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAA................................................................... 16 0 2 2.00 4 0 3 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCCTC............................................................ 23 1 1 2.00 2 2 0 0 0 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCGTAC........................................................... 25 1 1 2.00 2 2 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGTC.......................................................... 25 3 1 2.00 2 1 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACTG.............................................................. 21 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................TTATACTGTCTGGTAAAACCGT............................................................. 22 1 1 2.00 2 0 1 0 1 0 0
....................................................................................................TAATACTGTCTGGTCAAACCGATC........................................................... 24 3 1 2.00 2 2 0 0 0 0 0
...................................................................................................CTAATACTGTCTGGTAAAACC............................................................... 21 0 1 2.00 2 0 1 0 1 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGTT............................................................ 23 2 1 2.00 2 0 1 0 1 0 0
....................................................................................................TCATACTGTCTGGTAAAACCG.............................................................. 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACCGTCTGGTAAAACCGT............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGCAAAACCGT............................................................. 22 1 1 2.00 2 0 0 1 1 0 0
....................................................................................................TAGTACTGTCTGGTAAAACCG.............................................................. 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCTTT............................................................ 23 2 1 2.00 2 0 1 0 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCCT............................................................. 22 1 1 2.00 2 0 1 1 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCATC............................................................ 23 2 1 2.00 2 2 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTAA.......................................................... 25 2 1 2.00 2 0 0 0 2 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTTG........................................................... 23 2 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAAA........................................................... 24 3 1 2.00 2 0 1 1 0 0 0
....................................................................................................TAATAATGTCTGGTAAAACCGT............................................................. 22 1 1 2.00 2 0 0 1 1 0 0
....................................................................................................AAATACTGTCTGGTAAAACCGT............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTCAAACCG.............................................................. 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAACACCGT............................................................. 22 1 1 2.00 2 0 0 1 1 0 0
....................................................................................................TACTACTGTCTGGTAAAACCGT............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGATAAAACCGATC........................................................... 24 3 1 2.00 2 2 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCCATC........................................................... 24 3 2 1.50 3 3 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGT............................................................. 20 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAC............................................................ 23 1 1 1.00 1 0 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACCGTTAT.......................................................... 25 3 1 1.00 1 0 0 0 1 0 0
....................................................................................................TACTACTGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TGATACTGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTC............................................................ 23 0 1 1.00 1 0 0 0 0 1 0
....................................................................................................TAATACTGTCTGGACAAACCG.............................................................. 21 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAAGACTGTCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 0 0 0 0 1
....................................................................................................TAATACTGTCTGGTAAAACCGTTTT.......................................................... 25 3 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTCATC......................................................... 26 3 1 1.00 1 1 0 0 0 0 0
...................................................................................................CTAATACTGTCTGGTACAACCGATC........................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACGG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAAGCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TATTACTGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAGAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTTT........................................................... 23 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTATCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTTTCTGGTAAAACC............................................................... 20 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGCAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TCATACTGTCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TGATACTGTCTGGTAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGCATC........................................................ 27 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTGTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTATAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACCGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTCGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAGTACTGTCTGGTAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAACCGATC............................................................ 23 3 3 1.00 3 3 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAACCCGTCTC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTTGTAAAACCGA............................................................. 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGTTAAAACCGTA............................................................ 23 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTCCGAC........................................................ 27 2 1 1.00 1 0 0 1 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTATT.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCGTCTC.......................................................... 26 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATGCTGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGAATC........................................................ 27 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................AATACTGTCTGTTAAAACCGT............................................................. 21 1 1 1.00 1 0 0 0 1 0 0
...................................................................................................CTAATACTGTTTGGTAAAACCG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCAT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TACTACTGTCTGGTAAAACCATC............................................................ 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................................................AATAATACTGTCTGGTAAAACCGT............................................................. 24 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGAT.......................................................... 25 3 1 1.00 1 0 1 0 0 0 0
....................................................................................................TACTACTGTCTGGTAAAACCGTTC........................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................TATACTGTCTGGTAAAACCG.............................................................. 20 1 1 1.00 1 0 0 0 1 0 0
...................................................................................................CTAATACTGTCTGGTAAAACCT.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TACTACTGTCTGGTAAAACCGTAT........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAGCCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTATCTGGGAAAACCGT............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGTAAAGCCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGTCATC......................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAATCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCTA............................................................. 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATCCTGTCTGGTAAAACCGTATA.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAG............................................................ 23 2 1 1.00 1 0 1 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGGA............................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGGACA.......................................................... 25 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTTAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGAAAAACCGGTC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TACTACTGTCTGGTAAAACCGTCTC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGCCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTCGTAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAATACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACGATC............................................................ 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................CCAATACTGTCTGGTAAAACCGT............................................................. 23 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTTTGATAAAACCG.............................................................. 21 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAACACCGTA............................................................ 23 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATGCTGTCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
........................................................................................................ACTGTCTGGTAAAACCGATC........................................................... 20 2 3 1.00 3 2 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTCAAACCGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGCCTGGTAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGTCTC........................................................ 27 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTTC........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGGTT........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACAGT............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAACCCG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGCTAAAACCG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTCCGA......................................................... 26 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAACCCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGACTGGTAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAATACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................AATACTGTCTTGTAAAACCGT............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...................................................................................................CTAATACTGTATGGTAAAACCG.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TACTACTGTCTGGTAAAACCGATC........................................................... 24 3 2 1.00 2 2 0 0 0 0 0
....................................................................................................TCATACTGTCTGGTAAAACCGTCTC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTCCC.......................................................... 25 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTATGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCGTTA........................................................... 23 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................GAATACTGTCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TCATACTGTCTGGTAAAACCGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGAAAAACCGT............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAATCG.............................................................. 21 1 2 1.00 2 0 2 0 0 0 0
....................................................................................................TAATACTGTATCGTAAAACCGT............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCGATC........................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................TATACTGTCTGGTAAAACCGT............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGTC............................................................ 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATATTGTCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGAAAAACCGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAA.................................................................. 17 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGTCTC.......................................................... 25 3 1 1.00 1 0 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACCTATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGATA........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTTAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTATCTGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTCTCTGGTAAAACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
......................................................................................................ATACTGTCTGGTAAAACCG.............................................................. 19 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGAAAAACCGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGTTAAAACCGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGGGC........................................................... 24 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGAACC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGTA............................................................ 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGCCTC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTCAAACCGCTC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACGGTCTGTTAAAACCGT............................................................. 22 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCCGGTAAAACCG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTGTAC......................................................... 26 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAATACTTTCTGGTAAAACCGTA............................................................ 23 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAGACCGT............................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................TATTACTGTCTGGTAAAACCGATC........................................................... 24 3 3 0.67 2 1 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAAACTTT............................................................. 22 2 3 0.67 2 0 0 1 1 0 0
....................................................................................................TAACACTGTCTGGTAAAA................................................................. 18 1 9 0.56 5 0 2 2 1 0 0
.....................................................................................................AATACTGTCTGGTAAAA................................................................. 17 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................TAATACTATCTGGTAAAACCGATC........................................................... 24 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGGAACACCG.............................................................. 21 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTTGTAAAACCTT............................................................. 22 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACTATC............................................................ 23 2 2 0.50 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAAACG.............................................................. 21 2 2 0.50 1 0 0 1 0 0 0
.....................................................................................................CATACTGTCTGGTACAACCGTTC........................................................... 23 3 2 0.50 1 1 0 0 0 0 0
.....................................................................................................AATACTGTCTGGTAAAACCTTT............................................................ 22 2 4 0.50 2 0 0 2 0 0 0
....................................................................................................TACTACTGTCTGGTAACACCG.............................................................. 21 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAAACGTT............................................................ 23 2 2 0.50 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGGACAACCGT............................................................. 22 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATATTGTCTGGTAAAACCGATC........................................................... 24 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGC............................................................. 22 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAAA................................................................ 19 1 4 0.50 2 0 0 2 0 0 0
....................................................................................................TAATACTGTCTGTGAAAACCG.............................................................. 21 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................TAATAGTGTCTGGTAAAACCGA............................................................. 22 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAATCGT............................................................. 22 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCAA............................................................. 22 2 4 0.50 2 0 0 2 0 0 0
....................................................................................................TAATACTGTCTTGTAAAACCGTTT........................................................... 24 3 2 0.50 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGGTCACACCGT............................................................. 22 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGCAAAACCGC............................................................. 22 2 2 0.50 1 0 0 0 1 0 0
....................................................................................................TAATACTGCCTGGGAAAACCG.............................................................. 21 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGTAAC.......................................................... 25 3 2 0.50 1 0 0 0 0 1 0
....................................................................................................TAATACTGTCTGGTAAACCG............................................................... 20 2 4 0.50 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTGAAACCGATC........................................................... 24 3 2 0.50 1 1 0 0 0 0 0
....................................................................................................GAATACTGTCTGGGAAAACCG.............................................................. 21 2 2 0.50 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACCGGGA........................................................... 24 3 2 0.50 1 0 0 1 0 0 0
.......................................................................................................TACTGTCTGGTAAAACCGTAA........................................................... 21 2 3 0.33 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACAGTATA.......................................................... 25 3 3 0.33 1 0 0 0 0 1 0
.....................................................................................................AATACTGTCTGGGAAAACCGG............................................................. 21 2 3 0.33 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTGTTAAAACCTT............................................................. 22 2 3 0.33 1 0 0 0 1 0 0
....................................................................................................TAATACTTTCTGGGAAAACCGT............................................................. 22 2 3 0.33 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGGAAAACCGGT............................................................ 23 3 4 0.25 1 0 1 0 0 0 0
....................................................................................................TAATACCGTCTGGTAAAACCA.............................................................. 21 2 4 0.25 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTTGGAAAACCG.............................................................. 21 2 4 0.25 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTGGGTAAACCGA............................................................. 22 3 4 0.25 1 0 1 0 0 0 0
......................................................................................................ATACTGTCTGGCAAAACCGTT............................................................ 21 2 4 0.25 1 0 0 1 0 0 0
....................................................................................................TAATCCTGTCTGGTAAAA................................................................. 18 1 4 0.25 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACAA.............................................................. 21 2 9 0.22 2 0 2 0 0 0 0
....................................................................................................TAATACTGTCTGGTAAAACATC............................................................. 22 3 20 0.20 4 4 0 0 0 0 0
....................................................................................................TAATACTGTCTGTTAAAACCT.............................................................. 21 2 5 0.20 1 0 0 0 1 0 0
.................................................................................................CGTTAATACTGTCTGGTAAAAC................................................................ 22 3 6 0.17 1 0 0 1 0 0 0
....................................................................................................TAATACTTTCTTGTAAAACCG.............................................................. 21 2 6 0.17 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTGGTAAAAG................................................................ 19 1 6 0.17 1 0 1 0 0 0 0
....................................................................................................TAATACTGTCTTGTAAAACCT.............................................................. 21 2 7 0.14 1 0 0 0 1 0 0
....................................................................................................TAATACTGTCTTTTAAAACCG.............................................................. 21 2 7 0.14 1 0 0 1 0 0 0
.....................................................................................................AATACTGTCTGGTAA................................................................... 15 0 8 0.13 1 0 1 0 0 0 0
.........................................................................................................CTGTCTGGTAAAACCGATC........................................................... 19 2 9 0.11 1 1 0 0 0 0 0
..........................................GACCCCGCCGCCGGGCGATC......................................................................................................................... 20 3 14 0.07 1 0 0 0 0 1 0
........................................................................................................ACTGTCTGGTAAAACCGTATC.......................................................... 21 3 15 0.07 1 1 0 0 0 0 0
....................................................................................................TAATACTGTCTGGAAAACCC............................................................... 20 2 18 0.06 1 0 0 1 0 0 0
....................................................................................................TAATACTGTCTTGTAAAA................................................................. 18 1 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

GGGTCCCGGAAGGGAAGTGTCCGGGACGTCTGTGGTCGGGTCCTGGGCCGGCGGCCGGCTACTCGCAGAATGGTCTGTGCCAATCTGGACCGAGAGACAGATTATGACAGACCATTTTGGCAGGTAGGCGCCGGACTAGTGGCAATCTCCTCTCTCGACGGACGGGACGTCGAGTAGTCACAC

***********************************.(((........))).(((.((.((((.(((..((((((((((..(((((((..........)))))))..))))))))))...))).)))).)))))(((((....))))).***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:02 PM