ID:

mml-mir-410

 Coordinate:

chr7:164964276-164964355 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.8 -36.0 -36.0

Sense Strand Reads

GCTGGCACCACGGGACGCAGCAGCCACGTTCTTGAGCTGATGGCACTCTGGGTACCTGAGGAGAGGTTGTCTGTGATGAGTTCGCTTTTATTAATGACGAATATAACACAGATGGCCTGTTTTCAGTACCGCTACCGCCCAGTGGTGTGCGGGCGCCGTTCCTGAGTGGGCCTTTTCAGG

************************************************..(((((.((((((.((((((((((((.((.(((((.((........))))))).)).)))))))))))).))))))))))).....********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116840

epididymis		 SRR116841

prostate		 SRR116844

epididymis		 SRR116845

epididymis		 SRR116842

seminal vesicle		 SRR116839

testes
...................................................................................................AATATAACACAGATGGCCTGT............................................................ 21 0 1 1049.00 1049 910 67 63 0 0 7 2
...................................................................................................AATATAACACAGATGGCCTGTAA.......................................................... 23 2 1 103.00 103 75 14 9 0 0 3 2
...................................................................................................AATATAACACAGATGGCCTGTA........................................................... 22 1 1 62.00 62 44 12 5 0 0 1 0
...................................................................................................AATATAACACAGATGGCCTGTATC......................................................... 24 2 1 45.00 45 0 0 0 29 16 0 0
...................................................................................................AATATAACACAGATGGCCTGA............................................................ 21 1 1 29.00 29 21 4 2 0 0 1 1
...................................................................................................AATATAACACAGATGGCCTG............................................................. 20 0 1 24.00 24 17 4 3 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTT........................................................... 22 0 1 22.00 22 17 2 3 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTTT............................................................ 21 1 1 16.00 16 13 2 1 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAT.......................................................... 23 1 1 12.00 12 9 2 0 0 1 0 0
...................................................................................................AATATAACATAGATGGCCTGT............................................................ 21 1 1 10.00 10 10 0 0 0 0 0 0
...................................................................................................AATATAACACAGATTGCCTGT............................................................ 21 1 1 5.00 5 4 0 1 0 0 0 0
...................................................................................................AATATAACACAGACGGCCTGT............................................................ 21 1 1 5.00 5 5 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGTCCTGT............................................................ 21 1 1 4.00 4 3 1 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTA.......................................................... 23 1 1 4.00 4 3 1 0 0 0 0 0
...........................................CACTCTGGGTACCTGAGGAG..................................................................................................................... 20 0 1 4.00 4 2 1 0 0 0 0 1
..................................................................................................GAATATAACACAGATGGCCTGT............................................................ 22 0 1 3.00 3 3 0 0 0 0 0 0
...................................................................................................AATATAACACATATGGCCTGT............................................................ 21 1 1 3.00 3 3 0 0 0 0 0 0
...............................................................AGGTTGTCTGTGATGAGTTCG................................................................................................ 21 0 1 3.00 3 2 0 1 0 0 0 0
...................................................................................................AATATAACACAGAAGGCCTGT............................................................ 21 1 1 3.00 3 2 0 1 0 0 0 0
...................................................................................................AATATAACAAAGATGGCCTGT............................................................ 21 1 1 2.00 2 1 0 1 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAG.......................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCT.............................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATGTAACACAGATGGCCTGT............................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................GAATATAACACAGATGGCCTGTA........................................................... 23 1 1 2.00 2 0 2 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGC............................................................ 21 1 1 2.00 2 1 1 0 0 0 0 0
...................................................................................................AATATAACACGGATGGCCTGT............................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................ATATAACACAGATGGCCTGTTA.......................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................TATAACACAGATGGCCTGTTT.......................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCTTGT............................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACACATGGCCTGT............................................................ 21 1 1 2.00 2 2 0 0 0 0 0 0
...............................................................AGGTTGTCTGTGATGAGTTC................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAATC........................................................ 25 2 1 2.00 2 0 0 0 0 2 0 0
...................................................................................................AATATAACACATATGGCCTGTT........................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGACTGT............................................................ 21 1 1 2.00 2 1 0 1 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTT.......................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGAAT.......................................................... 23 2 2 1.50 3 2 1 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGAATC......................................................... 24 3 3 1.33 4 0 0 0 4 0 0 0
...................................................................................................AATTTAACACAGATGGCCTGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTACAC........................................................ 25 3 1 1.00 1 0 0 0 0 1 0 0
...........................................CACTCTGGGTACCCGAGGAG..................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................AATATATCACAGATGGCCTGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAATACAGATGGCCTGTAT.......................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TATAACACAGATGGCCTGTA........................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACATAGATGGCCTGTA........................................................... 22 2 2 1.00 2 1 1 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTCA......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TATAACACAGATGGCCTGTTTT......................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................GAATATAACACAGATGGCCTGA............................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AGTATAACACAGATGGCCTGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTATC........................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................GAGGTTGTCTGTGATGAGTTC................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTA............................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................CGAATATAACACAGATGGCCTGT............................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTAA......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTACTC........................................................ 25 2 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................AAAATAACACAGATGGCCTGT............................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTTTATC...................................................... 27 3 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................AATATAACACAAATGGCCTGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCC............................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAAT......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
..........................................GCACTCTGGGTACCTGAGGAG..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAGCACAGATGGCCTGT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGAT........................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTTATC....................................................... 26 3 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................AATATAACACAGATGGCCTTTTATC........................................................ 25 2 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................AATATAACATAGATGGCCTGTATC......................................................... 24 3 3 1.00 3 0 0 0 0 3 0 0
...................................................................................................AATATAACACAGATGGCCTGAA........................................................... 22 2 4 1.00 4 4 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTTG.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTTTAT.......................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGATA.......................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
...................................................................................................AATAAAACACAGATGGCCTGT............................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................ATAACACAGATGGCCTGTTTAT........................................................ 22 2 2 0.50 1 0 0 1 0 0 0 0
...................................................................................................AATATAAAACAGATGGCCTGT............................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGAGATC........................................................ 25 3 2 0.50 1 0 0 0 0 1 0 0
...................................................................................................AATATAACACAGATGGCCTGTAAC......................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................AAAATATAACACAGATGGCCTGT............................................................ 23 2 2 0.50 1 1 0 0 0 0 0 0
...............................................................AGGTTGTCTGTGATGAGTT.................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGAAGGCCTGTA........................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATTGCCTGTA........................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACATATGGCCTGTATC......................................................... 24 3 3 0.33 1 0 0 0 1 0 0 0
...................................................................................................AATCTAACACAGATGGCCTGTATC......................................................... 24 3 4 0.25 1 0 0 0 0 1 0 0
...................................................................................................AATATAACACAGATGTCCTGC............................................................ 21 2 5 0.20 1 1 0 0 0 0 0 0
...............................................................AGGTTGTCTGTGATGTGTT.................................................................................................. 19 1 5 0.20 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGTAAA......................................................... 24 3 6 0.17 1 0 1 0 0 0 0 0
...................................................................................................AATATAACACAGATGGCCTGCAG.......................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAGATTGCCTGTAA.......................................................... 23 3 16 0.06 1 0 0 1 0 0 0 0
.....................................................................................................TATAACACAGATGGCCTGAA........................................................... 20 2 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................AATATAACACAAATGGCCTTT............................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................AATATAACAAAGATGTCCTGT............................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGACCGTGGTGCCCTGCGTCGTCGGTGCAAGAACTCGACTACCGTGAGACCCATGGACTCCTCTCCAACAGACACTACTCAAGCGAAAATAATTACTGCTTATATTGTGTCTACCGGACAAAAGTCATGGCGATGGCGGGTCACCACACGCCCGCGGCAAGGACTCACCCGGAAAAGTCC

*********************************************..(((((.((((((.((((((((((((.((.(((((.((........))))))).)).)))))))))))).))))))))))).....************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:31 PM