ID:

mml-mir-378a

 Coordinate:

chr6:147808882-147808947 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.7 -49.3 -49.1
mature

  1. chr2:176865092-176865112 -
  2. mml-mir-378a  chr6:147808924-147808944 +
star

Sense Strand Reads

GGTGAGCGGCTTGTATGGGACCATGCAGCCAGAGGGTGACAGAGCCACCCAGGGCTCCTGACTCCAGGTCCTGTGTGTTACCTCGAAATAGCACTGGACTTGGAGTCAGAAGGCCTGAGTGGAGTCACCTTCCCCACTCTCTGGCTGGGTGACCCCGGAGCAAGCC

***************************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))..************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116840

epididymis		 SRR116843

cortex		 SRR116844

epididymis		 SRR116839

testes		 SRR116845

epididymis
............................................................................................ACTGGACTTGGAGTCAGAAGGCA................................................... 23 1 2 20464.00 40928 21869 10795 4653 3450 0 161 0
............................................................................................ACTGGACTTGGAGTCAGAAGG..................................................... 21 0 2 20311.00 40622 18389 16131 4362 1620 0 120 0
............................................................................................ACTGGACTTGGAGTCAGAAGGC.................................................... 22 0 2 15813.50 31627 13862 12130 3236 2260 0 139 0
............................................................................................ACTGGACTTGGAGTCAGAAGGA.................................................... 22 1 3 6222.00 18666 9725 5866 2349 654 1 70 1
............................................................................................ACTGGACTTGGAGTCAGAAGGCAT.................................................. 24 1 2 5452.00 10904 4459 3428 1436 1437 3 141 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCT................................................... 23 1 4 1916.00 7664 5118 1290 845 347 0 64 0
............................................................................................ACTGGACTTGGAGTCAGAAG...................................................... 20 0 7 1627.14 11390 5061 3925 1934 432 0 38 0
............................................................................................ACTGGACTTGGAGTCAGAAGGT.................................................... 22 1 6 1115.50 6693 3473 2305 686 182 0 47 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAA.................................................. 24 2 5 1009.00 5045 2184 1815 560 450 1 35 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCA................................................... 22 1 4 846.50 3386 1806 1010 331 231 0 8 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAA................................................... 23 2 5 536.60 2683 1287 868 359 155 0 14 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATC................................................. 25 2 2 525.50 1051 3 3 0 0 738 0 307
............................................................................................ACTGGACTTGGAGTCAGAAGGCTT.................................................. 24 1 3 493.33 1480 919 214 161 162 1 23 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCT................................................... 22 1 6 458.00 2748 1454 943 219 129 0 3 0
.............................................................................................CTGGACTTGGAGTCAGAAGGC.................................................... 21 0 4 427.50 1710 769 679 120 139 0 3 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCG................................................... 23 1 3 286.67 860 505 189 92 70 0 4 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCAT.................................................. 23 1 4 262.75 1051 462 388 105 93 0 3 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCA................................................... 23 2 2 171.50 343 73 147 29 94 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCTT.................................................. 23 1 5 153.00 765 410 234 55 64 0 2 0
.............................................................................................CTGGACTTGGAGTCAGAAGG..................................................... 20 0 4 148.75 595 313 166 73 42 0 1 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCAA.................................................. 23 2 9 145.89 1313 686 381 135 109 0 2 0
............................................................................................ACTGGACTTGGAGTCAGA........................................................ 18 0 13 117.00 1521 663 544 262 47 0 5 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTA................................................... 23 2 9 113.67 1023 572 258 132 51 0 10 0
............................................................................................ACTGGACTTGGAGTCAGAATGCA................................................... 23 2 2 109.00 218 38 133 33 14 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAATGC.................................................... 22 1 2 99.50 199 16 143 36 4 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCGT.................................................. 24 1 2 88.50 177 93 41 20 22 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAATC................................................. 25 3 4 86.75 347 1 0 0 0 242 0 104
............................................................................................ACTGGACTTGGAGTCGGAAGGC.................................................... 22 1 2 85.00 170 43 84 8 34 0 1 0
.............................................................................................CTGGACTTGGAGTCAGAAGGA.................................................... 21 1 6 84.00 504 275 151 57 20 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAATG..................................................... 21 1 4 72.25 289 21 231 32 5 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAG.................................................. 24 2 3 66.00 198 85 71 23 19 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAA....................................................... 19 0 10 65.30 653 340 204 85 22 0 2 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAT................................................... 23 2 7 57.43 402 211 101 72 12 1 5 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATAA................................................ 26 2 1 54.00 54 17 24 11 1 0 1 0
............................................................................................ACTGGACTTGGAGGCAGAAGGCA................................................... 23 2 2 53.00 106 75 19 7 5 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCAT.................................................. 24 2 2 50.50 101 21 40 9 31 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCC................................................... 23 0 2 48.50 97 70 16 9 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAATGCAT.................................................. 24 2 2 44.00 88 9 57 15 7 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTT................................................... 23 2 13 41.77 543 318 126 66 20 0 13 0
............................................................................................ACTGGACTTGTAGTCAGAAGG..................................................... 21 1 2 41.50 83 15 56 9 3 0 0 0
............................................................................................ACTGGACTTGGAGGCAGAAGGC.................................................... 22 1 2 37.00 74 50 18 4 2 0 0 0
............................................................................................ACTGGACTTGGAGGCAGAAGG..................................................... 21 1 3 34.00 102 54 31 14 3 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATA................................................. 25 2 3 33.67 101 37 37 14 10 1 2 0
............................................................................................ACTGGACTTGTAGTCAGAAGGCA................................................... 23 2 2 33.50 67 14 36 10 4 0 3 0
............................................................................................ACTGGACTTTGAGTCAGAAGG..................................................... 21 1 2 33.00 66 14 46 5 1 0 0 0
............................................................................................ACTGGACTTGGGGTCAGAAGG..................................................... 21 1 2 32.00 64 26 26 7 5 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTA................................................. 25 2 3 31.00 93 55 19 9 9 0 1 0
............................................................................................ACTGGACTTGGCGTCAGAAGG..................................................... 21 1 2 29.50 59 31 17 4 7 0 0 0
............................................................................................ACTGGACTTGGAGTTAGAAGG..................................................... 21 1 4 29.00 116 46 56 10 4 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAAA.................................................. 24 3 15 27.93 419 188 150 63 17 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTAT.................................................. 24 2 6 27.83 167 73 55 23 12 0 4 0
............................................................................................ACTGGACTTGTAGTCAGAAGGC.................................................... 22 1 2 27.50 55 4 35 7 8 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATTA................................................ 26 2 2 27.50 55 27 13 5 8 0 2 0
............................................................................................ACTGGACTTGGAGTCGGAAGG..................................................... 21 1 2 27.00 54 21 22 4 7 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCCA.................................................. 23 1 4 26.25 105 67 26 8 4 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAAT.................................................. 24 2 3 25.33 76 37 22 13 3 0 1 0
............................................................................................ACTGGACTTGGCGTCAGAAGGCA................................................... 23 2 2 25.00 50 25 7 6 12 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGG..................................................... 22 0 2 24.50 49 26 19 2 2 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAGGC.................................................... 22 1 2 23.00 46 7 34 4 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGACGGC.................................................... 22 1 2 23.00 46 23 12 7 4 0 0 0
............................................................................................ACTGGACTTGGGGTCAGAAGGC.................................................... 22 1 2 23.00 46 24 15 3 3 0 1 0
............................................................................................ACTGGACTTGGAGTCAGACGG..................................................... 21 1 3 22.67 68 34 22 6 6 0 0 0
............................................................................................ACTGGACTTGGAGTTAGAAGGC.................................................... 22 1 3 22.67 68 23 33 3 9 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGATC.................................................. 24 3 17 20.82 354 1 0 0 0 259 0 94
............................................................................................ACTGGACTTGGGGTCAGAAGGCA................................................... 23 2 3 20.33 61 35 14 6 6 0 0 0
............................................................................................ACTGGACTTGGATTCAGAAGG..................................................... 21 1 3 20.00 60 14 24 10 12 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGG.................................................... 22 1 4 20.00 80 54 17 6 3 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGG..................................................... 21 1 2 19.00 38 3 26 7 2 0 0 0
............................................................................................ACTGGACTTGGCGTCAGAAGGC.................................................... 22 1 2 18.00 36 18 6 4 8 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGAA................................................... 22 2 12 18.00 216 117 52 37 9 0 1 0
............................................................................................ACTGGACTTTGAGTCAGAAGGCA................................................... 23 2 3 17.33 52 10 25 9 8 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGGC.................................................... 22 1 3 17.00 51 32 15 1 3 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCT.................................................. 24 0 2 16.00 32 22 9 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTATC................................................. 25 3 8 16.00 128 1 0 0 0 102 0 25
............................................................................................ACTGGACTTGGAGTTAGAAGGCA................................................... 23 2 4 15.75 63 21 25 7 10 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCTTTA................................................ 25 2 3 15.67 47 27 14 3 2 0 1 0
............................................................................................ACTGGACTTGGAGTCATAAGGCA................................................... 23 2 3 15.67 47 4 21 13 9 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCC................................................... 22 0 4 15.50 62 44 12 3 3 0 0 0
............................................................................................ACTGGACTTGGAGTCCGAAGG..................................................... 21 1 2 15.00 30 19 7 2 2 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGT.................................................... 21 1 12 14.75 177 96 62 13 5 0 1 0
............................................................................................ACTGGACTTGGAGTCCGAAGGC.................................................... 22 1 2 14.50 29 22 3 0 4 0 0 0
............................................................................................ACTGGACTTGGAGTCCGAAGGCA................................................... 23 2 2 14.50 29 21 2 2 4 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCTTA................................................. 24 2 8 14.38 115 61 39 9 6 0 0 0
............................................................................................ACTGGACTTGGAGACAGAAGGCA................................................... 23 2 2 14.00 28 17 8 2 1 0 0 0
............................................................................................ACTGGGCTTGGAGTCAGAAGG..................................................... 21 1 10 13.90 139 63 31 23 21 0 1 0
............................................................................................ACTGGACTTGGAGTCAGACGGCA................................................... 23 2 3 13.00 39 20 7 3 9 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGGCA................................................... 23 2 5 13.00 65 50 5 4 6 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAGGG..................................................... 21 1 2 13.00 26 16 8 2 0 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGGC.................................................... 22 1 2 13.00 26 4 13 3 6 0 0 0
............................................................................................ACTGGGCTTGGAGTCAGAAGGC.................................................... 22 1 7 12.71 89 30 32 7 20 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTAA................................................ 26 2 2 12.50 25 13 5 4 1 0 2 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCA.................................................. 24 1 2 12.50 25 14 8 1 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCGA.................................................. 24 2 5 12.40 62 33 19 3 7 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAGGGCA................................................... 23 2 2 11.50 23 12 6 0 5 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCATTA................................................ 25 2 2 11.00 22 7 10 5 0 0 0 0
............................................................................................ACCGGACTTGGAGTCAGAAGG..................................................... 21 1 2 11.00 22 12 8 2 0 0 0 0
............................................................................................ACTGGACTTGGAGTTAGAAGGA.................................................... 22 2 10 10.80 108 41 58 6 3 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCATC................................................. 24 2 4 10.50 42 1 0 0 0 23 0 18
............................................................................................GCTGGACTTGGAGTCAGAAGGCA................................................... 23 2 7 10.14 71 38 11 8 14 0 0 0
............................................................................................ACTGGACTTGGAGACAGAAGG..................................................... 21 1 2 10.00 20 7 11 1 1 0 0 0
............................................................................................ACCGGACTTGGAGTCAGAAGGCA................................................... 23 2 2 10.00 20 13 3 4 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATTAT............................................... 27 3 2 10.00 20 7 5 7 0 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAC.................................................. 24 2 3 9.67 29 9 7 5 8 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCT................................................... 23 2 6 9.67 58 23 22 2 11 0 0 0
............................................................................................ACTGGGCTTGGAGTCAGAAGGCA................................................... 23 2 9 9.67 87 34 16 6 30 0 1 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCG................................................... 22 1 5 9.60 48 30 6 8 4 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGA.................................................... 23 1 2 9.50 19 10 8 0 1 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAGGCAT.................................................. 24 2 2 9.50 19 4 8 3 4 0 0 0
............................................................................................ACTGGACTTGTAGTCAGAAGGA.................................................... 22 2 4 9.25 37 3 20 12 2 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAG...................................................... 19 0 12 9.08 109 58 29 16 5 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTTA................................................ 26 2 3 9.00 27 14 8 1 4 0 0 0
............................................................................................ACTGGACTTGGAGGCAGAAGGCAT.................................................. 24 2 2 9.00 18 10 3 3 2 0 0 0
............................................................................................ACTGGACTTGGATTCAGAAGGC.................................................... 22 1 3 8.67 26 5 9 10 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGG..................................................... 21 1 5 8.60 43 28 10 3 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTTT.................................................. 24 2 10 8.40 84 45 17 11 8 0 3 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCTC................................................. 25 1 2 8.00 16 0 0 0 0 11 0 5
............................................................................................ACTGGACTTGGCGTCAGAAGGCAT.................................................. 24 2 2 8.00 16 3 2 4 7 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGC.................................................... 23 0 2 8.00 16 5 5 2 4 0 0 0
............................................................................................ACTGGACTTGGGGTCAGAAGGCAT.................................................. 24 2 2 7.50 15 9 3 0 3 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAGGGC.................................................... 22 1 2 7.50 15 8 5 0 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGTC.................................................... 22 1 8 7.38 59 5 31 13 10 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTAT................................................ 26 3 7 7.14 50 29 10 7 2 0 2 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCATAA................................................ 25 2 2 7.00 14 5 5 3 1 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGGCAT.................................................. 24 2 2 7.00 14 3 5 2 4 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCATA................................................. 24 2 7 6.71 47 23 15 5 4 0 0 0
............................................................................................ACTGGACTTGGAGTTAGAAGGCAT.................................................. 24 2 3 6.67 20 4 7 3 6 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCTTAA................................................ 25 2 3 6.67 20 13 3 2 2 0 0 0
............................................................................................ACTGGACTTGGAGCCAGAAGGC.................................................... 22 1 5 6.60 33 13 14 4 2 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCCT.................................................. 23 0 4 6.50 26 16 8 1 1 0 0 0
............................................................................................ACTGGACTTGGATTCAGAAGGCA................................................... 23 2 4 6.50 26 8 10 3 5 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGCA................................................... 24 1 2 6.50 13 4 7 1 1 0 0 0
............................................................................................ACTGGACTTGGAGACAGAAGGC.................................................... 22 1 2 6.50 13 4 7 2 0 0 0 0
............................................................................................ACTGGACTTGGCGTCAGAAGGA.................................................... 22 2 3 6.33 19 11 3 1 3 0 1 0
.............................................................................................CTGGACTTGGAGTCGGAAGGCT................................................... 22 2 10 6.30 63 12 36 4 11 0 0 0
............................................................................................GCTGGACTTGGAGTCAGAAGG..................................................... 21 1 7 6.29 44 24 9 5 6 0 0 0
............................................................................................ACTGGACTTGGAGTCAGATGG..................................................... 21 1 4 6.25 25 9 12 4 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGTG................................................... 23 2 13 6.08 79 62 8 7 2 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGGCATC................................................. 25 3 2 6.00 12 0 0 0 0 7 0 5
............................................................................................GCTGGACTTGGAGTCAGAAGGC.................................................... 22 1 5 6.00 30 17 7 4 2 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCCATA................................................ 25 2 2 6.00 12 6 5 0 1 0 0 0
............................................................................................ACTGGACTTGTAGTCAGAAGGCAT.................................................. 24 2 2 6.00 12 1 6 3 1 0 1 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATG................................................. 25 1 1 6.00 6 2 3 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTG.................................................. 24 2 6 5.83 35 23 5 4 3 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGA.................................................... 22 2 4 5.75 23 14 4 3 1 0 1 0
............................................................................................ACTGGACTTGGTGTCAGAAGGC.................................................... 22 1 3 5.67 17 7 4 1 5 0 0 0
............................................................................................ACTGGAATTGGAGTCAGAAGGC.................................................... 22 1 3 5.67 17 6 7 2 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAACGC.................................................... 22 1 3 5.67 17 6 9 2 0 0 0 0
..........................................................................................GCACTGGACTTGGAGTCAGAAG...................................................... 22 0 2 5.50 11 5 6 0 0 0 0 0
............................................................................................ACTGGACTTGGAGCCAGAAGGCA................................................... 23 2 6 5.50 33 16 9 6 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAAAA................................................ 26 3 6 5.33 32 12 13 5 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGGCAT.................................................. 24 2 3 5.33 16 13 1 2 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAC................................................... 23 1 2 5.00 10 5 4 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCCGAAGGCAT.................................................. 24 2 2 5.00 10 8 2 0 0 0 0 0
...........................................................................................AACTGGACTTGGAGTCAGAAGGC.................................................... 23 1 2 5.00 10 6 3 1 0 0 0 0
............................................................................................ACTGGACTTGGGGTCAGAAGGA.................................................... 22 2 5 5.00 25 14 6 4 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAAGA................................................ 26 2 2 5.00 10 5 3 1 1 0 0 0
...........................................................................................GACTGGACTTGGAGTCAGAAG...................................................... 21 1 13 4.92 64 28 26 8 2 0 0 0
............................................................................................ACTGGACTTGGACTCAGAAGG..................................................... 21 1 6 4.83 29 8 18 1 2 0 0 0
............................................................................................ACTGGACTTGGTGTCAGAAGGCA................................................... 23 2 4 4.75 19 8 5 1 5 0 0 0
............................................................................................ACTGGACTTGGAGCCAGAAGGCAT.................................................. 24 2 4 4.75 19 6 6 2 5 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAG...................................................... 20 1 7 4.71 33 3 20 9 1 0 0 0
............................................................................................ACTGGACTCGGAGTCAGAAGGCA................................................... 23 2 3 4.67 14 7 5 0 2 0 0 0
............................................................................................ACTGGACCTGGAGTCAGAAGGC.................................................... 22 1 3 4.67 14 9 2 1 2 0 0 0
............................................................................................ACTGGACTTGGAGTCCGAAGGA.................................................... 22 2 3 4.67 14 11 1 2 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAATGCT................................................... 23 2 7 4.57 32 5 21 6 0 0 0 0
............................................................................................ACTGGACTTGGAGTCTGAAGGC.................................................... 22 1 2 4.50 9 4 4 0 1 0 0 0
............................................................................................ACTGGACTTCGAGTCAGAAGG..................................................... 21 1 2 4.50 9 3 3 1 2 0 0 0
............................................................................................ACTGTACTTGGAGTCAGAAGG..................................................... 21 1 2 4.50 9 3 4 2 0 0 0 0
............................................................................................ACTGGACTTGGAGCCAGAAGG..................................................... 21 1 6 4.50 27 16 9 1 1 0 0 0
............................................................................................ACTGGACTCGGAGTCAGAAGGC.................................................... 22 1 3 4.33 13 7 3 0 3 0 0 0
............................................................................................ACTGGACCTGGAGTCAGAAGGCA................................................... 23 2 4 4.25 17 8 4 3 1 0 1 0
.............................................................................................CTGGACTTGGAGTCAGAAGGTA................................................... 22 2 17 4.18 71 44 16 9 2 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCAA.................................................. 24 3 9 4.11 37 5 23 1 8 0 0 0
............................................................................................ACTGGACTTGGAGTCTGAAGG..................................................... 21 1 3 4.00 12 8 4 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCGTAA................................................ 26 2 1 4.00 4 2 1 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCACAAGGCA................................................... 23 2 2 4.00 8 6 1 0 0 0 1 0
............................................................................................ACTGGACTTGGTGTCAGAAGG..................................................... 21 1 4 4.00 16 9 2 2 3 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCGT.................................................. 23 1 4 4.00 16 9 6 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCACAAGGCAT.................................................. 24 2 2 4.00 8 5 2 0 1 0 0 0
............................................................................................ACTGGACTTGGATTCAGAAGGA.................................................... 22 2 7 4.00 28 9 9 5 5 0 0 0
............................................................................................ACTGGACTTGGAGTCACAAGGC.................................................... 22 1 2 4.00 8 4 2 2 0 0 0 0
............................................................................................ACCGGACTTGGAGTCAGAAGGC.................................................... 22 1 2 4.00 8 5 2 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGATT.................................................. 24 2 5 3.80 19 8 7 2 1 1 0 0
............................................................................................ACTGGAATTGGAGTCAGAAGG..................................................... 21 1 4 3.75 15 6 8 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGTAGG..................................................... 21 1 3 3.67 11 6 4 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGAGT.................................................. 24 2 3 3.67 11 4 3 2 1 0 1 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCAG.................................................. 23 2 8 3.63 29 21 6 1 1 0 0 0
..............................................................................................TGGACTTGGAGTCAGAAGGCAT.................................................. 22 1 5 3.60 18 10 6 1 1 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAGGCATC................................................. 25 3 2 3.50 7 0 0 0 0 4 0 3
............................................................................................ACTGGACTTGGCGTCAGAAGGCT................................................... 23 2 4 3.50 14 8 3 2 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGACGGCAT.................................................. 24 2 2 3.50 7 4 1 2 0 0 0 0
..............................................................................................TGGACTTGGAGTCAGAAGGCTT.................................................. 22 1 9 3.44 31 21 7 2 1 0 0 0
............................................................................................ACTGGACTTGGAGGCAGAAGGCT................................................... 23 2 6 3.33 20 15 2 3 0 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCG................................................... 23 2 3 3.33 10 1 2 1 6 0 0 0
............................................................................................ACTGGACTTAGAGTCAGAAGGCA................................................... 23 2 3 3.33 10 8 1 1 0 0 0 0
............................................................................................ACTGGTCTTGGAGTCAGAAGGC.................................................... 22 1 3 3.33 10 6 1 1 0 0 2 0
............................................................................................ACTGGACTTGGAGTCAGAAGTCA................................................... 23 2 17 3.29 56 9 29 9 8 0 1 0
...........................................................................................AACTGGACTTGGAGTCAGAAGGCA................................................... 24 2 4 3.25 13 3 5 3 2 0 0 0
..............................................................................................TGGACTTGGAGTCAGAAGGCA................................................... 21 1 8 3.25 26 17 5 3 1 0 0 0
............................................................................................ACTGGACTTGTAGTCAGAAG...................................................... 20 1 9 3.22 29 1 19 7 1 0 1 0
..............................................................................................TGGACTTGGAGTCAGAAGGC.................................................... 20 0 5 3.20 16 10 4 0 2 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAGGA.................................................... 22 2 6 3.17 19 2 12 5 0 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGGA.................................................... 22 2 6 3.17 19 1 12 5 1 0 0 0
............................................................................................ACTGGGCTTGGAGTCAGAAGGCAT.................................................. 24 2 6 3.17 19 7 3 1 8 0 0 0
............................................................................................ACTGGGCTTGGAGTCAGAAGGA.................................................... 22 2 12 3.08 37 17 16 1 3 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGGCATC................................................. 25 3 4 3.00 12 0 0 0 0 10 0 2
............................................................................................ACTGGACTTGGACTCAGAAGGC.................................................... 22 1 4 3.00 12 3 8 0 1 0 0 0
............................................................................................ACTGGACTTAGAGTCAGAAGG..................................................... 21 1 4 3.00 12 6 5 1 0 0 0 0
............................................................................................ACTGGACTTCGAGTCAGAAGGC.................................................... 22 1 2 3.00 6 3 2 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAAGCA................................................... 23 2 6 3.00 18 12 3 2 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAAG................................................. 25 2 2 3.00 6 1 3 0 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCGTA................................................. 25 2 3 3.00 9 4 2 1 2 0 0 0
............................................................................................ACTGGACTCGGAGTCAGAAGG..................................................... 21 1 5 3.00 15 12 1 2 0 0 0 0
............................................................................................ACTGTACTTGGAGTCAGAAGGCA................................................... 23 2 2 3.00 6 4 0 1 1 0 0 0
............................................................................................ACTGGACTTCGAGTCAGAAGGCA................................................... 23 2 3 3.00 9 5 1 1 2 0 0 0
............................................................................................ACTGGACTTGGAGGCAGAAG...................................................... 20 1 12 3.00 36 22 9 4 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTTAT............................................... 27 3 6 3.00 18 13 0 5 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTG................................................. 25 1 2 3.00 6 2 2 1 0 0 1 0
............................................................................................ACTGGACTTGTAGTCAGAATGC.................................................... 22 2 3 3.00 9 0 5 3 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAGGA.................................................... 22 2 7 2.86 20 10 4 4 2 0 0 0
............................................................................................ATTGGACTTGGAGTCAGAAGG..................................................... 21 1 7 2.71 19 9 9 0 1 0 0 0
............................................................................................ACTGGACCTGGAGTCAGAAGG..................................................... 21 1 3 2.67 8 4 3 1 0 0 0 0
............................................................................................ACTGGACTTAGAGTCAGAAGGC.................................................... 22 1 3 2.67 8 5 2 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTGAGAAGG..................................................... 21 1 3 2.67 8 2 5 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGACA.................................................. 24 2 3 2.67 8 3 4 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAG......................................................... 17 0 18 2.61 47 22 22 1 2 0 0 0
.............................................................................................CTGGACTTGGAGTCGGAAGGCA................................................... 22 2 5 2.60 13 4 5 0 4 0 0 0
............................................................................................ACTGGACTTGGAGTTAGAAGGCT................................................... 23 2 5 2.60 13 7 5 0 1 0 0 0
............................................................................................ACTGGATTTGGAGTCAGAAGG..................................................... 21 1 7 2.57 18 9 7 1 1 0 0 0
............................................................................................ACTCGACTTGGAGTCAGAAGGCA................................................... 23 2 4 2.50 10 4 1 1 2 0 2 0
............................................................................................ACTGGACGTGGAGTCAGAAGGC.................................................... 22 1 2 2.50 5 4 0 0 1 0 0 0
............................................................................................ACTGGACTTGGCGTCAGAAGGCATC................................................. 25 3 2 2.50 5 0 0 0 0 1 0 4
............................................................................................AGTGGACTTGGAGTCAGAAGGC.................................................... 22 1 4 2.50 10 3 7 0 0 0 0 0
............................................................................................ACTGGACTTGGAATCAGAAGGC.................................................... 22 1 2 2.50 5 2 3 0 0 0 0 0
............................................................................................ACTGGACTTGCAGTCAGAAGGC.................................................... 22 1 2 2.50 5 1 3 0 0 0 1 0
............................................................................................ACTGGACTTGGAGACAGAAGGCAT.................................................. 24 2 2 2.50 5 3 0 1 1 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCATC................................................. 25 3 2 2.50 5 0 0 0 0 2 0 3
............................................................................................ACTGGACTTGGATTCAGAAGGCAT.................................................. 24 2 4 2.50 10 3 3 1 3 0 0 0
............................................................................................ACTGGACTTGCAGTCAGAAGG..................................................... 21 1 2 2.50 5 3 1 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATGT................................................ 26 2 2 2.50 5 3 1 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAGGGCAT.................................................. 24 2 2 2.50 5 1 2 2 0 0 0 0
............................................................................................ACTGCACTTGGAGTCAGAAGG..................................................... 21 1 2 2.50 5 2 3 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCACAAGG..................................................... 21 1 2 2.50 5 2 0 1 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAGG...................................................... 20 1 12 2.33 28 14 13 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTGAGAAGGC.................................................... 22 1 3 2.33 7 1 4 1 1 0 0 0
............................................................................................ACTGGACTTGGAGTCTGAAGGCA................................................... 23 2 6 2.33 14 8 3 1 2 0 0 0
............................................................................................ACAGGACTTGGAGTCAGAAGGC.................................................... 22 1 3 2.33 7 5 1 1 0 0 0 0
............................................................................................ACTCGACTTGGAGTCAGAAGGC.................................................... 22 1 3 2.33 7 2 3 0 1 0 1 0
...........................................................................................AACTGGACTTGGAGTCAGAAGG..................................................... 22 1 4 2.25 9 4 2 2 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAAAAGGCA................................................... 23 2 4 2.25 9 6 2 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCAATA................................................ 26 3 4 2.25 9 4 3 0 0 1 1 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGT.................................................... 23 1 4 2.25 9 6 2 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAG...................................................... 20 1 9 2.22 20 11 8 1 0 0 0 0
............................................................................................ACTGGACTTGGAGTCACAAGGA.................................................... 22 2 5 2.20 11 6 2 2 0 0 1 0
............................................................................................CCTGGACTTGGAGTCAGAAGGC.................................................... 22 1 5 2.20 11 9 0 1 1 0 0 0
............................................................................................ACTGGACTTGGCGTCAGAAG...................................................... 20 1 8 2.13 17 5 5 4 3 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGTT................................................... 22 2 20 2.10 42 23 15 3 1 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGTAT.................................................. 23 2 11 2.09 23 13 6 3 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGACGGCATC................................................. 25 3 2 2.00 4 0 0 0 0 3 0 1
............................................................................................ACTGGACTTGTAGTCAGAAGGCT................................................... 23 2 6 2.00 12 2 5 3 1 0 1 0
............................................................................................ACTGGACATGGAGTCAGAAGG..................................................... 21 1 3 2.00 6 3 1 1 1 0 0 0
......................................................CTCCTGACTCCAGGTCCTGTG........................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCTCA................................................ 26 1 1 2.00 2 2 0 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCTTC................................................. 25 2 4 2.00 8 4 1 1 0 1 0 1
............................................................................................ACTGGACTTCGAGTCAGAAGGCATC................................................. 25 3 2 2.00 4 0 0 0 0 4 0 0
............................................................................................ACTGGACTTGGAGTCAGAACG..................................................... 21 1 3 2.00 6 1 3 1 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATAAA............................................... 27 3 1 2.00 2 0 0 1 1 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGCT................................................... 24 1 2 2.00 4 3 1 0 0 0 0 0
............................................................................................ACTGGACTTGGATTCAGAAG...................................................... 20 1 12 2.00 24 7 8 5 4 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATGA................................................ 26 1 1 2.00 2 2 0 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCAG................................................. 25 1 1 2.00 2 2 0 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGGAGG..................................................... 21 1 9 2.00 18 8 7 2 1 0 0 0
............................................................................................ACTGGACTTGGAGTCAGGAGGC.................................................... 22 1 8 1.88 15 7 8 0 0 0 0 0
.............................................................................................CTGGACTTGGAGTCAGCAGGC.................................................... 21 1 8 1.88 15 4 7 2 2 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCGA.................................................. 23 2 8 1.88 15 8 5 1 1 0 0 0
.............................................................................................CTGGACTTGGAGTCGGAAGGCTT.................................................. 23 2 7 1.86 13 3 7 1 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGCAG...................................................... 20 1 15 1.80 27 18 3 4 2 0 0 0
............................................................................................GCTGGACTTGGAGTCAGAAGGCAT.................................................. 24 2 5 1.80 9 3 5 1 0 0 0 0
............................................................................................ACTGGACTTGGTGTCAGAAGGA.................................................... 22 2 5 1.80 9 2 3 2 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGATGGCA................................................... 23 2 5 1.80 9 4 2 0 3 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGAAT.................................................. 23 2 5 1.80 9 6 1 2 0 0 0 0
............................................................................................ACTGGACTTGGAGTCATAAGGCT................................................... 23 2 5 1.80 9 3 2 1 3 0 0 0
............................................................................................ACTGGTCTTGGAGTCAGAAGG..................................................... 21 1 5 1.80 9 5 2 0 0 0 2 0
............................................................................................ACTGGACTTGGAGTCAGAACGCA................................................... 23 2 4 1.75 7 6 0 0 1 0 0 0
.............................................................................................CTGGACTTGGAGTCGGAAGGC.................................................... 21 1 4 1.75 7 4 2 0 1 0 0 0
............................................................................................ACTGGTCTTGGAGTCAGAAGGCA................................................... 23 2 4 1.75 7 4 2 0 0 0 1 0
............................................................................................ACCGGACTTGGAGTCAGAAGGA.................................................... 22 2 4 1.75 7 6 1 0 0 0 0 0
.............................................................................................CTGGACTTGGAGTCAGAAGGCTTG................................................. 24 1 4 1.75 7 6 0 1 0 0 0 0
............................................................................................ACTGTACTTGGAGTCAGAAGGA.................................................... 22 2 4 1.75 7 4 2 0 1 0 0 0
............................................................................................ACTGGACTTGGAGTCGGAAGGCTT.................................................. 24 2 4 1.75 7 0 4 1 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAAAAGGC.................................................... 22 1 3 1.67 5 4 1 0 0 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCATTAA............................................... 27 3 3 1.67 5 3 1 0 1 0 0 0
............................................................................................ACAGGACTTGGAGTCAGAAGGCA................................................... 23 2 3 1.67 5 4 0 0 1 0 0 0
............................................................................................ACTTGACTTGGAGTCAGAAGGC.................................................... 22 1 3 1.67 5 1 3 1 0 0 0 0
...........................................................................................CACTGGACTTGGAGTCAGAAGGAA................................................... 24 2 3 1.67 5 3 1 1 0 0 0 0
............................................................................................ACTTGACTTGGAGTCAGAAGG..................................................... 21 1 3 1.67 5 2 2 1 0 0 0 0
............................................................................................ACTGGACTTGGTGTCAGAAGGCAT.................................................. 24 2 3 1.67 5 1 0 1 3 0 0 0
............................................................................................ACTGGACTTGGAGTCAGTAGGC.................................................... 22 1 3 1.67 5 2 1 0 2 0 0 0
............................................................................................ACTGGACTTGGAGTCAGAAGGCCTATC............................................... 27 3 3 1.67 5 0 0 0 0 4 0 1
............................................................................................ACTGGGCTTGGAGTCGGAAGGC.................................................... 22 2 8 1.63 13 0 5 0 8 0 0 0
............................................................................................ACTGGACTTTGAGTCAGAAGGT.................................................... 22 2 8 1.63 13 1 10 1 0 0 1 0

Anti-sense strand reads

CCACTCGCCGAACATACCCTGGTACGTCGGTCTCCCACTGTCTCGGTGGGTCCCGAGGACTGAGGTCCAGGACACACAATGGAGCTTTATCGTGACCTGAACCTCAGTCTTCCGGACTCACCTCAGTGGAAGGGGTGAGAGACCGACCCACTGGGGCCTCGTTCGG

**************************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))..*************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:27 PM