ID:

mml-mir-342

 Coordinate:

chr7:163986775-163986873 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.5 -46.6

Sense Strand Reads

GCAGACTAAGACGGAGTTCCTGAACCAAGACCGCCTGCTGGCCAGCCTGTGAAACTGGGCTCAAGGTGAGGGGTGCTATCTGTGATTGAGGGACATGGTTAATGGAATTGTCTCACACAGAAATCGCACCCGTCACCTTGGCCTACTTATCACCACCCCAAACAGAGGAGCACGCCTTCTCCAGCCACAGCCTATGGAA

*****************************************************..(((((.((((((((.((((((..((((((..(((((..(((.....)))......)))))))))))....)))))).)))))))))))))...*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116839

testes
..............................................................................................................TCTCACACAGAAATCGCACCCGT.................................................................. 23 0 1 2727.00 2727 1546 0 0 490 387 293 11
..............................................................................................................TCTCACACAGAAATCGCACCCGTC................................................................. 24 0 1 1812.00 1812 1357 0 1 196 127 118 13
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATC.............................................................. 27 1 1 1516.00 1516 0 1206 310 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTATC............................................................... 26 2 1 1373.00 1373 0 932 441 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGATC................................................................ 25 3 1 1025.00 1025 0 707 318 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCA................................................................ 23 0 1 460.00 460 311 0 0 83 32 33 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTCA................................................................ 25 0 1 392.00 392 306 14 0 43 17 12 0
..............................................................................................................TCTCACACAGAAATCGCACCCG................................................................... 22 0 1 375.00 375 139 0 0 75 79 82 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCT................................................................ 25 1 1 302.00 302 160 0 0 66 38 30 8
....................................................................AGGGGTGCTATCTGTGATTGA.............................................................................................................. 21 0 1 114.00 114 59 0 0 12 19 22 2
....................................................................AGGGGTGCTATCTGTGATTGAGGATC......................................................................................................... 26 2 1 99.00 99 0 74 25 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGATC......................................................................................................... 25 2 1 75.00 75 0 60 15 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTC................................................................. 22 0 1 55.00 55 30 0 0 12 10 3 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTT................................................................. 24 1 1 53.00 53 23 2 0 6 11 11 0
....................................................................AGGGGTGCTATCTGTGATTGAG............................................................................................................. 22 0 1 51.00 51 28 0 0 5 8 10 0
....................................................................AGGGGTGCTATCTGTGATTGAGG............................................................................................................ 23 0 1 46.00 46 35 0 0 5 3 3 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTA................................................................. 24 1 1 41.00 41 15 2 3 10 3 8 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCC................................................................. 24 1 1 38.00 38 33 0 0 3 1 1 0
....................................................................AGGGGTGCTATCTGTGATT................................................................................................................ 19 0 1 31.00 31 23 0 0 3 3 2 0
..............................................................................................................TCTCACACAGAAATCGCACCC.................................................................... 21 0 1 30.00 30 13 0 0 6 5 5 1
..............................................................................................................TCTCACACAGAAATCGCACCCATC................................................................. 24 1 1 30.00 30 1 9 19 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGC.................................................................. 23 1 1 27.00 27 19 0 0 4 4 0 0
................................................................................................................TCACACAGAAATCGCACCCGT.................................................................. 21 0 1 25.00 25 12 0 0 6 4 3 0
................................................................................................................TCACACAGAAATCGCACCCGTCT................................................................ 23 1 1 23.00 23 6 0 0 9 1 6 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTTATC.............................................................. 27 2 1 20.00 20 0 15 5 0 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGT.................................................................. 23 1 1 19.00 19 17 0 0 2 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAA............................................................... 26 1 1 18.00 18 11 0 0 6 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAA................................................................ 25 1 1 18.00 18 11 0 0 2 4 1 0
....................................................................AGGGGTGCTATCTGTGATTG............................................................................................................... 20 0 1 18.00 18 14 0 0 1 1 2 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCCTC.............................................................. 27 2 1 17.00 17 0 13 4 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCAC...................................................................... 19 0 1 17.00 17 9 3 2 1 0 2 0
................................................................................................................TCACACAGAAATCGCACCCGTCAT............................................................... 24 1 1 16.00 16 8 0 0 5 3 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACA........................................................................................................ 27 0 1 16.00 16 9 0 0 0 2 4 1
....................................................................AGGGGTGCTATCTGTGATTGAGGGA.......................................................................................................... 25 0 1 16.00 16 12 0 0 1 1 1 1
..............................................................................................................TCTCACACAGAAATCTCACCCGTCATC.............................................................. 27 2 1 15.00 15 0 10 5 0 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTC................................................................. 24 1 1 15.00 15 14 0 0 0 1 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAA............................................................... 24 1 1 15.00 15 6 0 0 5 1 3 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACATC...................................................................................................... 28 1 1 14.00 14 0 14 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGATC.......................................................................................................... 25 3 2 13.50 27 0 18 9 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAC......................................................................................................... 26 0 1 13.00 13 7 0 0 1 1 3 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTTC................................................................ 25 2 1 13.00 13 0 5 7 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAATC............................................................. 28 3 1 13.00 13 0 12 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACATC...................................................................................................... 29 1 1 12.00 12 0 11 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGA............................................................................................................ 23 1 1 12.00 12 10 0 0 0 1 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCTC................................................................ 25 3 1 12.00 12 0 11 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGA.................................................................. 23 1 1 11.00 11 3 0 0 1 4 3 0
..............................................................................................................TCTCACACAGAAATCGCACC..................................................................... 20 0 1 11.00 11 4 0 0 3 2 2 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGTATC............................................................... 26 3 1 11.00 11 0 7 4 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCCATC.............................................................. 27 2 1 11.00 11 0 10 1 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGATC........................................................................................................ 26 2 1 10.00 10 0 9 1 0 0 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGT.................................................................. 23 1 1 10.00 10 6 0 0 1 2 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGATT................................................................ 25 3 1 10.00 10 0 8 2 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAA............................................................................................................. 22 1 1 9.00 9 4 0 0 1 2 2 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACA........................................................................................................ 26 0 1 9.00 9 6 0 0 0 0 3 0
....................................................................AGGGGTGCTATCTGTGATTGAGT............................................................................................................ 23 1 1 9.00 9 5 0 0 3 1 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTATC............................................................... 26 3 1 8.00 8 0 7 1 0 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTATC............................................................... 26 3 1 8.00 8 0 5 3 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAATC.............................................................. 27 2 1 8.00 8 0 6 2 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGATC........................................................................................................ 27 2 1 8.00 8 0 7 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGAATC......................................................................................................... 26 3 1 8.00 8 0 7 1 0 0 0 0
..............................................................................................................TCTCACACAGAGATCGCACCCGT.................................................................. 23 1 1 7.00 7 5 0 0 1 0 1 0
....................................................................AGGGGTGCTATCTGTGATTTAGG............................................................................................................ 23 1 1 7.00 7 5 0 0 2 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGA........................................................................................................... 24 1 1 7.00 7 3 0 0 0 2 2 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGT.................................................................. 23 1 1 7.00 7 4 0 0 1 1 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTC............................................................... 26 1 1 7.00 7 0 5 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGTCATC.............................................................. 27 2 1 7.00 7 0 2 5 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAATC............................................................... 26 3 1 7.00 7 0 7 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAC......................................................................................................... 25 0 1 7.00 7 4 0 0 0 1 2 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGTC................................................................. 24 1 1 7.00 7 6 0 0 0 0 1 0
..............................................................................................................TCTCACACAGACATCGCACCCGTCATC.............................................................. 27 2 1 6.00 6 0 6 0 0 0 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGT.................................................................. 25 2 1 6.00 6 5 0 0 0 0 1 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGA.......................................................................................................... 24 0 1 6.00 6 4 0 0 1 0 1 0
..............................................................................................................TCTCACACCGAAATCGCACCCGT.................................................................. 23 1 1 6.00 6 0 0 0 0 6 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTC................................................................. 24 1 1 6.00 6 1 0 0 1 4 0 0
..............................................................................................................TCTCCCACAGAAATCGCACCCGTCATC.............................................................. 27 2 1 6.00 6 0 5 1 0 0 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTC................................................................. 23 0 1 6.00 6 5 0 0 1 0 0 0
................................................................................................................TCACACAGAAATCGCACCCG................................................................... 20 0 1 6.00 6 3 0 0 0 2 1 0
.....................................................................GGGGTGCTATCTGTGATTGAGAATC......................................................................................................... 25 3 1 6.00 6 0 4 2 0 0 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTC................................................................. 24 1 1 6.00 6 6 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAT................................................................. 24 2 1 6.00 6 0 4 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCCA................................................................ 25 1 1 5.00 5 5 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATTGCACCCGTATC............................................................... 26 3 1 5.00 5 0 4 1 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGG........................................................................................................... 23 0 1 5.00 5 4 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAT............................................................... 26 1 1 5.00 5 2 0 1 1 0 1 0
..............................................................................................................TCTCACACAGACATCGCACCCGT.................................................................. 23 1 1 5.00 5 5 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCA....................................................................... 18 0 1 5.00 5 1 0 0 2 0 2 0
..............................................................................................................TCTCACACAGCAATCGCACCCGTCATC.............................................................. 27 2 1 5.00 5 0 5 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCATC..................................................................... 20 1 1 5.00 5 0 2 3 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGG........................................................................................................... 24 0 1 5.00 5 3 0 0 0 2 0 0
..............................................................................................................TCTCACACAGAGATCGCACCCGTC................................................................. 24 1 1 5.00 5 5 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGAATC........................................................................................................ 26 3 1 5.00 5 0 3 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCATC............................................................... 26 3 2 4.50 9 0 5 4 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCC................................................................ 25 1 1 4.00 4 4 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAT............................................................................................................. 22 1 1 4.00 4 3 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAATCCCACCCGTCATC.............................................................. 27 2 1 4.00 4 0 3 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTC................................................................. 24 1 1 4.00 4 4 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAATC....................................................................................................... 27 3 1 4.00 4 0 2 2 0 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTCATC.............................................................. 27 2 1 4.00 4 0 2 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCACC.............................................................. 27 0 1 4.00 4 0 1 3 0 0 0 0
..............................................................................................................TCTCACACAGAAATCTCACCCGT.................................................................. 23 1 1 4.00 4 3 0 0 0 1 0 0
................................................................................................................TCACACAGAAATCGCACCCGCCA................................................................ 23 1 1 4.00 4 2 0 0 0 1 1 0
..............................................................................................................TCTCACACAGAAATCGCACCTGTATC............................................................... 26 3 1 4.00 4 0 3 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTT.................................................................. 23 1 1 4.00 4 1 0 0 2 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCTGTCATC.............................................................. 27 2 1 4.00 4 0 3 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCATCCGTCATC.............................................................. 27 2 1 4.00 4 0 2 2 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTTAG............................................................................................................. 22 1 1 4.00 4 3 0 0 1 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACT........................................................................................................ 27 1 1 4.00 4 1 0 0 0 2 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCA................................................................... 22 1 1 4.00 4 1 0 0 1 1 1 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGC.................................................................. 23 2 1 4.00 4 4 0 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCATT.............................................................. 25 2 1 4.00 4 0 0 0 3 1 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGT.................................................................. 23 1 1 4.00 4 4 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAT......................................................................................................... 26 1 1 4.00 4 2 0 0 1 0 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCAATC............................................................. 26 3 1 4.00 4 0 4 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAATC........................................................................................................... 24 3 1 4.00 4 0 3 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTTA.............................................................................................................. 21 1 2 4.00 8 4 0 0 2 2 0 0
....................................................................AGGGGTGCTATCTGTGAT................................................................................................................. 18 0 1 4.00 4 1 0 0 0 1 2 0
..............................................................................................................TCTCACACAGAAATCGCACCATC.................................................................. 23 3 6 3.33 20 0 10 10 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGTCATC.............................................................. 27 2 1 3.00 3 0 2 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGT.................................................................. 23 1 1 3.00 3 2 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTTTC............................................................... 26 2 1 3.00 3 0 2 1 0 0 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGC.................................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
..............................................................................................................TCTCATACAGAAATCGCACCCGTCATC.............................................................. 27 2 1 3.00 3 0 3 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCATC.............................................................. 25 1 1 3.00 3 0 1 2 0 0 0 0
..............................................................................................................TCTCACACATAAATCGCACCCGTCATC.............................................................. 27 2 1 3.00 3 0 3 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTATCT.............................................................. 27 3 1 3.00 3 0 3 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAA................................................................. 24 2 1 3.00 3 0 0 0 1 2 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACAATC..................................................................................................... 29 3 1 3.00 3 0 1 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCTCACCCGTC................................................................. 24 1 1 3.00 3 2 0 0 0 1 0 0
................................................................................................................TCACACAGAAATCGCACCCGTA................................................................. 22 1 1 3.00 3 2 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGTATC............................................................... 26 3 1 3.00 3 0 0 3 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCTGT.................................................................. 23 1 1 3.00 3 1 0 0 0 2 0 0
..............................................................................................................TCTCACACAGAAATCACACCCGTC................................................................. 24 1 1 3.00 3 1 0 0 2 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGT........................................................................................................... 23 1 1 3.00 3 0 0 0 0 3 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCG................................................................... 22 1 1 3.00 3 2 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGTC................................................................. 24 1 1 3.00 3 2 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATTGCACCCGTC................................................................. 24 1 1 3.00 3 2 0 0 0 1 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGTC................................................................. 26 2 1 3.00 3 2 0 0 1 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCC................................................................ 23 1 1 3.00 3 3 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACA..................................................................... 20 1 1 3.00 3 1 0 0 1 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTGATC.............................................................. 27 2 1 3.00 3 0 0 3 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGT........................................................................................................... 24 1 1 3.00 3 2 0 0 0 0 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAA......................................................................................................... 26 1 1 3.00 3 2 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCT................................................................... 22 1 1 3.00 3 1 0 0 1 0 1 0
..............................................................................................................TCTCACACAGAAAACGCACCCGTC................................................................. 24 1 1 3.00 3 2 0 0 1 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAT......................................................................................................... 25 1 1 3.00 3 2 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGCC................................................................. 24 2 1 3.00 3 3 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTT............................................................................................................... 20 1 2 2.50 5 2 0 0 0 3 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACT........................................................................................................ 26 1 1 2.00 2 2 0 0 0 0 0 0
................................................................................................................TCACACAGACATCGCACCCGTCA................................................................ 23 1 1 2.00 2 0 0 0 1 0 1 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACCTC...................................................................................................... 28 2 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................TCTCACACAGAAACCGCACCCGT.................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTTAGGG........................................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCT................................................................ 24 1 1 2.00 2 0 0 0 1 0 1 0
....................................................................AGGGGTGCTATCTGTGATTGT.............................................................................................................. 21 1 1 2.00 2 1 0 0 1 0 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGT.................................................................. 22 0 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTTT................................................................ 25 2 1 2.00 2 0 0 0 0 0 1 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTCACTC............................................................. 28 2 1 2.00 2 0 2 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACAT....................................................................................................... 28 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGTCT................................................................ 25 2 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTTACACAGAAATCGCACCCGTC................................................................. 24 1 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCGCCCGT.................................................................. 23 1 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTATT............................................................... 26 3 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATGGCACCCGT.................................................................. 23 1 1 2.00 2 0 0 0 2 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCCT................................................................ 25 2 1 2.00 2 1 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATTGCACCCGT.................................................................. 23 1 1 2.00 2 1 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCACACCCGTCATC.............................................................. 27 2 1 2.00 2 0 1 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGT.......................................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCACACCCGT.................................................................. 23 1 1 2.00 2 1 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTATT............................................................. 28 3 1 2.00 2 0 2 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAAT........................................................................................................ 27 2 1 2.00 2 1 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCCTC................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAG............................................................................................................. 21 0 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCAACCGTC................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCATCCGTATC............................................................... 26 3 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................TCTCACACTGAAATCGCACCCGTATC............................................................... 26 3 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGCC................................................................. 24 2 1 2.00 2 1 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAC............................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCAACCGT.................................................................. 23 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGA........................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCATACAGAAATCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTTC.............................................................. 27 2 1 2.00 2 0 1 1 0 0 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0 0 0 0 0
................................................................................................................TCACCCAGAAATCGCACCCGTCA................................................................ 23 1 1 2.00 2 1 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAGTCGCACCCGTCATC.............................................................. 27 2 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGTCATC.............................................................. 27 2 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCATCCGTCA................................................................ 23 1 1 2.00 2 0 0 0 0 0 2 0
..............................................................................................................TCTCACACAGTAATCGCACCCGTCATC.............................................................. 27 2 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTAT................................................................ 23 2 1 2.00 2 0 0 0 1 0 1 0
..............................................................................................................TCTCACACATAAATCGCACCCGTATC............................................................... 26 3 1 2.00 2 0 0 2 0 0 0 0
................................................................................................................TCACACAGCAATCGCACCCGTCA................................................................ 23 1 1 2.00 2 0 0 0 2 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAAA................................................................ 25 2 1 2.00 2 0 0 0 0 2 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGTATC......................................................................................................... 26 3 1 2.00 2 0 2 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACTCGT.................................................................. 23 1 1 2.00 2 0 0 0 1 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATT.............................................................. 27 2 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCG................................................................ 23 1 1 2.00 2 1 0 0 1 0 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATA.............................................................. 27 2 1 2.00 2 0 1 1 0 0 0 0
..............................................................................................................TCTCACCCAGAAAACGCACCCGC.................................................................. 23 3 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCTCACCCGTA................................................................. 24 2 1 2.00 2 0 1 0 0 1 0 0
..............................................................................................................TCTCATACAGAAATCGCACCCGTCT................................................................ 25 2 1 2.00 2 1 0 0 0 0 0 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTAT................................................................ 25 2 1 2.00 2 0 2 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGATC............................................................................................................ 23 2 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAC................................................................ 25 2 1 2.00 2 0 0 2 0 0 0 0
.....................................................................AGGGTGCTATCTGTGATTGAGGATC......................................................................................................... 25 3 1 2.00 2 0 1 1 0 0 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCGT.................................................................. 23 1 1 2.00 2 1 0 0 1 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTAA................................................................ 23 1 1 2.00 2 0 0 0 0 0 2 0
..............................................................................................................TCTCACACAGAAATCGCAATC.................................................................... 21 2 2 1.50 3 0 1 2 0 0 0 0
................................................................................................................TTACACAGAAATCGCACCCGTCA................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTT................................................................. 24 2 1 1.00 1 0 0 0 0 0 0 1
..............................................................................................................TCTCACACAGCAATCGAACCCGT.................................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGACATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACACGTATC............................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAA.............................................................. 27 3 1 1.00 1 0 0 0 1 0 0 0
....................................................................AGGGGTGCTATGTGTGATTGA.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCACACACAGAAATCGCACCCGTC................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTTATTGAGGATC......................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCACACAGAAAGCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACATAAATCGCACCCGTC................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACAGAGAAATCGCACCCGTC................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAGATCGCACCCG................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACACAGAAAGCGCACCCGTC................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGCGATTGAGGGATC........................................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCAGCCGT.................................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCATTT............................................................. 26 2 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACGCAGAAATCGCACCCGTCATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCGTA................................................................. 24 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................................CACACAGAAATCGCACCCGTC................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCCCACAGAAATCGCACCCGTC................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGCCAA............................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................AATGGAATTGTCTCACACAGAAA............................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTAA.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAG............................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................CTCCCACAGAAATCGCACCCGGCT................................................................ 24 3 1 1.00 1 0 0 0 0 0 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGTC.......................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTCATC.............................................................. 27 2 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................TCACACAGAACTCGCACCCGTCT................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACACATAAATCTCACCCGTCATC.............................................................. 27 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTTAGGGACA........................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................AATCACACAGAAATCGCACCCGTCA................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGATATC...................................................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGACTGAGG............................................................................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................GCTCACACAGAAATCGCACCCGTATC............................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACCGACATCGCACCCGT.................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCACAATC........................................................... 28 3 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGGAAA............................................................... 26 3 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCG................................................................ 25 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAATCCCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCTCACAGAATTCGCACCCGT.................................................................. 23 2 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAGTCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACGGAAATCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................ACACAGAAATCGCACCCGTCAA............................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGGCATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCACCCGGCA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................GGTGCTATCTGTGATTGAGGATC......................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGCAA................................................................ 25 3 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACCCAGAAATCGCACCCGTC................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGAAA.......................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCT................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTGT................................................................ 25 2 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCG................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAA......................................................................................................... 25 1 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TCTCCCACAGAAATCGCACCCGTATC............................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................ACACAGAAAACGCACCCGTCA................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCCCACACAGAAATCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACATAGAAATCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACTGAAATCGCACCCGTCATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACCGCAATCGCACCCGTC................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TCTCACAAAGAAATCGCACCCGTCA................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATCT............................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGTCT................................................................ 25 2 1 1.00 1 0 0 0 0 0 1 0
..................................................................................................................ACACAGAAATCGCACCCGTCA................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................................................................ACACAGAAATCGCACCCG................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCACACAGAACTCGCACCCGT.................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTCATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGTC......................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCCCACCGAAATCGCACCCGTC................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
....................................................................AGGGGTGCTGTCTGTGATTGA.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACACAGAGATCGCACCCGTCA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGCTC........................................................................................................ 26 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTTACACAGAAATCGCACCCGT.................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCCCACAGAAATCGCAC...................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................AGGGGTGCTATCTGTGCTTGA.............................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAACCGCACCCGTCATC.............................................................. 27 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................AGGGGTGCTATCTGTTATTTAG............................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGGATC............................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCACACAGAAATCTCACCCGTATC............................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................TCTCACACAAATCGCACCCGTCATC.............................................................. 25 3 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTCT................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCTCACAGAAATCGCACCCGCCA................................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCTCACAGAAATCGCACCCGT.................................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0
..............................................................................................................TCTCACCCAGAAATCGTACCCGTCT................................................................ 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................GGGTGCTATCTGTGATTGAGGGAAATC...................................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................CACACAGAAATCGCACCCGTCT................................................................ 22 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGTC................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTCA................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGG.................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGTT......................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCACACAGAAATCGCGCCCGTCA................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTC.................................................................. 23 2 2 1.00 2 1 0 1 0 0 0 0

Anti-sense strand reads

CGTCTGATTCTGCCTCAAGGACTTGGTTCTGGCGGACGACCGGTCGGACACTTTGACCCGAGTTCCACTCCCCACGATAGACACTAACTCCCTGTACCAATTACCTTAACAGAGTGTGTCTTTAGCGTGGGCAGTGGAACCGGATGAATAGTGGTGGGGTTTGTCTCCTCGTGCGGAAGAGGTCGGTGTCGGATACCTT

***************************************************..(((((.((((((((.((((((..((((((..(((((..(((.....)))......)))))))))))....)))))).)))))))))))))...***************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:28 PM