ID:

mml-mir-340

 Coordinate:

chr6:178974856-178974950 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.0 -35.5 -35.5

Sense Strand Reads

TTTCCAGCTTGAGTCTTCAAGAGGGAGCCTCAACTGATTTCTAAAACCATTTGTACCTGGTGTGATTATAAAGCAATGAGACTGATTGTCATATGTTGTTTGTGGGATCCGTCTCAGTTACTTTATAGCCATACCTGGTATCTTATACCACAGATCATGGCCTGTTGAACAACATTTTAAAAGAGATTTCTAAAG

**************************************************..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))..**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116839

testes		 SRR116845

epididymis		 SRR116844

epididymis
.................................................................TTATAAAGCAATGAGACTGATT............................................................................................................ 22 0 1 40536.00 40536 28410 5336 3327 3097 366 0 0
.................................................................TTATAAAGCAATGAGACTGAT............................................................................................................. 21 0 1 9716.00 9716 5512 2597 928 620 59 0 0
.................................................................TTATAAAGCAATGAGACTGA.............................................................................................................. 20 0 1 2478.00 2478 1527 462 253 220 16 0 0
.................................................................TTATAAAGCAATGAGACTGATTA........................................................................................................... 23 1 1 1872.00 1872 880 516 247 206 23 0 0
.................................................................TTATAAAGCAATGAGACTGATA............................................................................................................ 22 1 2 1080.50 2161 805 982 219 145 10 0 0
.................................................................TTATAAAGCAATGAGACTGATTT........................................................................................................... 23 1 1 534.00 534 221 118 59 122 14 0 0
.................................................................TTATAAAGCAATTAGACTGATT............................................................................................................ 22 1 1 207.00 207 177 20 1 9 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAA........................................................................................................... 23 2 2 203.00 406 112 227 32 32 3 0 0
.................................................................TTATAAATCAATGAGACTGATT............................................................................................................ 22 1 1 147.00 147 112 17 4 12 2 0 0
.................................................................TTATAAAGCAATGAGACTGATTAA.......................................................................................................... 24 2 1 130.00 130 40 46 19 22 3 0 0
.................................................................TTATAAAGCAACGAGACTGATT............................................................................................................ 22 1 1 109.00 109 107 0 0 2 0 0 0
.................................................................TTATAAAGCAATGAGACTG............................................................................................................... 19 0 1 101.00 101 54 26 9 10 2 0 0
.................................................................TTATAAAGCAATGAGACTGATTATC......................................................................................................... 25 1 1 96.00 96 0 0 0 0 0 51 45
.................................................................TTATAAAGCAATGATACTGATT............................................................................................................ 22 1 2 59.50 119 72 33 0 13 1 0 0
.................................................................TTATAAAGCAATGAGACTGATG............................................................................................................ 22 1 1 57.00 57 27 22 7 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTTT.......................................................................................................... 24 1 1 51.00 51 8 12 4 22 5 0 0
.................................................................TTATAAAGCAATTAGACTGAT............................................................................................................. 21 1 1 49.00 49 35 12 0 1 1 0 0
.................................................................TTATAAAGCAATGAGACTTATT............................................................................................................ 22 1 2 47.00 94 64 20 3 6 1 0 0
.................................................................TTATAAAGCAATGAGACTGATTG........................................................................................................... 23 0 1 44.00 44 30 6 6 2 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTAT.......................................................................................................... 24 1 1 42.00 42 14 20 2 5 1 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCATC............................................................... 25 3 1 40.00 40 0 0 0 0 0 22 18
.................................................................TTATAAAGCAATGAGACTGCTT............................................................................................................ 22 1 1 38.00 38 19 4 12 2 1 0 0
.................................................................TTATAAATCAATGAGACTGAT............................................................................................................. 21 1 1 35.00 35 19 13 0 3 0 0 0
.................................................................TTATAAAGCAATGAGAATGATT............................................................................................................ 22 1 1 35.00 35 21 3 4 7 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAG........................................................................................................... 23 1 1 29.00 29 5 17 4 3 0 0 0
................................................................ATTATAAAGCAATGAGACTGA.............................................................................................................. 21 0 1 29.00 29 19 6 0 3 1 0 0
.................................................................TTATAAAGCAAGGAGACTGATT............................................................................................................ 22 1 1 26.00 26 25 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGAA............................................................................................................. 21 1 6 24.67 148 83 35 17 13 0 0 0
.................................................................TTATAAAGCCATGAGACTGATT............................................................................................................ 22 1 1 24.00 24 21 2 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGT.............................................................................................................. 20 1 2 23.00 46 25 9 4 6 2 0 0
.................................................................TTATAAAGCACTGAGACTGATT............................................................................................................ 22 1 1 22.00 22 10 1 1 2 8 0 0
.................................................................TTATAAAGCAACGAGACTGAT............................................................................................................. 21 1 1 22.00 22 22 0 0 0 0 0 0
.................................................................TTATAAAGCAGTGAGACTGATT............................................................................................................ 22 1 1 21.00 21 8 5 3 2 3 0 0
.................................................................TTATAAAGCAATAAGACTGATT............................................................................................................ 22 1 1 20.00 20 10 3 2 5 0 0 0
.................................................................TTATAAAACAATGAGACTGATT............................................................................................................ 22 1 1 20.00 20 13 4 2 1 0 0 0
.................................................................TTATAAAGCAATGAGACCGATT............................................................................................................ 22 1 1 19.00 19 13 2 4 0 0 0 0
.................................................................TTATAAAGCAATGCGACTGATT............................................................................................................ 22 1 1 18.00 18 13 2 1 1 1 0 0
.................................................................TTATAAGGCAATGAGACTGATT............................................................................................................ 22 1 1 18.00 18 13 0 3 2 0 0 0
................................................................CTTATAAAGCAATGAGACTGATT............................................................................................................ 23 1 1 16.00 16 9 4 2 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATC............................................................................................................ 22 1 1 16.00 16 11 1 2 2 0 0 0
...............................................................AATTATAAAGCAATGAGACTGATT............................................................................................................ 24 1 2 15.50 31 21 5 3 1 1 0 0
.................................................................TTATAAAGCAATGATACTGAT............................................................................................................. 21 1 3 15.33 46 23 19 1 3 0 0 0
.................................................................TTATAAAGCAATGTGACTGATT............................................................................................................ 22 1 1 15.00 15 13 1 1 0 0 0 0
.................................................................TTATAAAGCGATGAGACTGATT............................................................................................................ 22 1 1 15.00 15 8 2 4 1 0 0 0
.................................................................TTATAAAGCAATGAGGCTGATT............................................................................................................ 22 1 1 14.00 14 6 2 2 3 1 0 0
.................................................................TTATAAAGCAATGAGACTTAT............................................................................................................. 21 1 2 14.00 28 18 7 0 3 0 0 0
.................................................................TTATAAAGCAATCAGACTGATT............................................................................................................ 22 1 1 13.00 13 12 0 0 1 0 0 0
..................................................................TATAAAGCAATGAGACTGATT............................................................................................................ 21 0 2 12.50 25 18 4 2 1 0 0 0
.................................................................TTATAACGCAATGAGACTGATT............................................................................................................ 22 1 1 12.00 12 11 0 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGGTT............................................................................................................ 22 1 1 11.00 11 7 2 0 2 0 0 0
.................................................................TTATAAAGCAATGAGACTGTTT............................................................................................................ 22 1 1 11.00 11 7 2 1 1 0 0 0
................................................................ATTATAAAGCAATGAGACTGAT............................................................................................................. 22 0 1 10.00 10 6 2 1 1 0 0 0
.................................................................TTATCAAGCAATGAGACTGATT............................................................................................................ 22 1 1 10.00 10 7 1 1 1 0 0 0
.................................................................TTGTAAAGCAATGAGACTGATT............................................................................................................ 22 1 1 10.00 10 9 0 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACT................................................................................................................ 18 0 2 9.50 19 7 6 3 3 0 0 0
.................................................................TCATAAAGCAATGAGACTGATT............................................................................................................ 22 1 3 9.33 28 23 2 0 3 0 0 0
.................................................................TTATATAGCAATGAGACTGATT............................................................................................................ 22 1 1 9.00 9 5 1 2 0 1 0 0
.................................................................TTATAAAGCAATGAGACTGATTTA.......................................................................................................... 24 2 2 9.00 18 6 9 0 3 0 0 0
.................................................................TTATAGAGCAATGAGACTGATT............................................................................................................ 22 1 1 9.00 9 4 0 1 0 4 0 0
.................................................................TTATAAAGCATTGAGACTGATT............................................................................................................ 22 1 1 8.00 8 7 0 0 1 0 0 0
.................................................................TTATAAAGCAAGGAGACTGAT............................................................................................................. 21 1 1 7.00 7 7 0 0 0 0 0 0
................................................................TTTATAAAGCAATGAGACTGAT............................................................................................................. 22 1 1 7.00 7 4 1 0 1 1 0 0
.................................................................TTACAAAGCAATGAGACTGATT............................................................................................................ 22 1 1 7.00 7 5 0 1 1 0 0 0
.................................................................TTATAAAGCAATGACACTGATT............................................................................................................ 22 1 1 7.00 7 6 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTCATT............................................................................................................ 22 1 1 7.00 7 6 0 1 0 0 0 0
.................................................................TTATAAAGCAAAGAGACTGATT............................................................................................................ 22 1 2 6.50 13 11 1 0 0 1 0 0
.................................................................TTATAAAGCAACGAGACTGA.............................................................................................................. 20 1 1 6.00 6 6 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGAAT............................................................................................................ 22 1 2 6.00 12 4 4 3 1 0 0 0
.................................................................TTATAAAGCTATGAGACTGATT............................................................................................................ 22 1 1 6.00 6 5 0 1 0 0 0 0
.................................................................TTATAAAGCAATGGGACTGATT............................................................................................................ 22 1 2 6.00 12 7 3 0 2 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCCATC.............................................................. 26 1 1 6.00 6 0 0 0 0 0 5 1
.................................................................TTATAAAGCAATGAGACTGACT............................................................................................................ 22 1 2 6.00 12 10 1 1 0 0 0 0
.................................................................CTATAAAGCAATGAGACTGATT............................................................................................................ 22 1 3 5.67 17 14 0 2 1 0 0 0
.................................................................TTATAAAGCAATGAGAC................................................................................................................. 17 0 2 5.50 11 6 4 0 1 0 0 0
.................................................................TTATACAGCAATGAGACTGATT............................................................................................................ 22 1 2 5.50 11 7 1 0 1 2 0 0
................................................................CTTATAAAGCAATGAGACTGAT............................................................................................................. 22 1 1 5.00 5 3 2 0 0 0 0 0
.................................................................TTATAAACCAATGAGACTGAT............................................................................................................. 21 1 1 5.00 5 3 1 1 0 0 0 0
.................................................................TTATAAAGCAATGAGAGTGATT............................................................................................................ 22 1 1 5.00 5 2 2 0 0 1 0 0
.................................................................TTATGAAGCAATGAGACTGATT............................................................................................................ 22 1 3 5.00 15 12 1 2 0 0 0 0
.................................................................TTATAAATCAATGAGACTGA.............................................................................................................. 20 1 1 5.00 5 4 0 0 1 0 0 0
.................................................................TTATAAAGCGATGAGACTGAT............................................................................................................. 21 1 1 5.00 5 1 3 1 0 0 0 0
.................................................................TTATAAATCAATGAGACTGATTA........................................................................................................... 23 2 1 5.00 5 4 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGTT............................................................................................................. 21 1 1 5.00 5 1 3 0 1 0 0 0
.................................................................TTATAAACCAATGAGACTGATT............................................................................................................ 22 1 1 5.00 5 5 0 0 0 0 0 0
.................................................................TTCTAAAGCAATGAGACTGATT............................................................................................................ 22 1 2 4.50 9 6 2 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTCAT............................................................................................................. 21 1 2 4.50 9 6 3 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATGA........................................................................................................... 23 2 3 4.33 13 2 8 1 2 0 0 0
.................................................................TTATAAAGCAATTAGACTGATA............................................................................................................ 22 2 3 4.33 13 6 5 0 2 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTATA......................................................................................................... 25 2 1 4.00 4 0 2 0 2 0 0 0
.................................................................TTATAAAGCAATGAGACCGAT............................................................................................................. 21 1 1 4.00 4 4 0 0 0 0 0 0
.................................................................TTATAAAGCCATGAGACTGAT............................................................................................................. 21 1 1 4.00 4 3 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACAGATT............................................................................................................ 22 1 1 4.00 4 1 0 1 2 0 0 0
.................................................................TTATAAAGCAATGAGATTGATT............................................................................................................ 22 1 2 4.00 8 7 1 0 0 0 0 0
.................................................................TTATAACGCAATGAGACTGAT............................................................................................................. 21 1 1 4.00 4 3 0 1 0 0 0 0
.................................................................TTAAAAAGCAATGAGACTGATT............................................................................................................ 22 1 2 4.00 8 6 2 0 0 0 0 0
.................................................................TTACAAAGCAATGAGACTGAT............................................................................................................. 21 1 1 4.00 4 3 1 0 0 0 0 0
.................................................................TTATAAAGCAATTAGACTGA.............................................................................................................. 20 1 2 3.50 7 4 3 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTAAA......................................................................................................... 25 3 4 3.50 14 3 5 2 4 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGATC................................................................ 24 3 2 3.50 7 0 0 0 0 0 5 2
.................................................................TTATAAAGCAATGAGACTGATTC........................................................................................................... 23 1 2 3.50 7 4 1 1 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATGT........................................................................................................... 23 2 2 3.50 7 1 4 1 1 0 0 0
.................................................................TTATAAAGCAATCAGACTGAT............................................................................................................. 21 1 1 3.00 3 2 0 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGGT............................................................................................................. 21 1 1 3.00 3 1 0 1 1 0 0 0
.................................................................TTATAAAGCAATGCGACTGAT............................................................................................................. 21 1 1 3.00 3 2 1 0 0 0 0 0
...............................................................AATTATAAAGCAATGAGACTGAT............................................................................................................. 23 1 2 3.00 6 4 1 1 0 0 0 0
................................................................ATTATAAAGCAATGAGACTG............................................................................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0
.................................................................TTATAAAGCAATGATACTGA.............................................................................................................. 20 1 3 3.00 9 3 4 0 2 0 0 0
.................................................................TTATAAGGCAATGAGACTGAT............................................................................................................. 21 1 1 3.00 3 2 1 0 0 0 0 0
.................................................................TTATAAAGCAGTGAGACTGAT............................................................................................................. 21 1 1 3.00 3 2 0 1 0 0 0 0
.................................................................TTATAAAGCAATGAGCCTGATT............................................................................................................ 22 1 3 3.00 9 5 2 2 0 0 0 0
..................................................................TATAAAGCAATGAGACTGATTT........................................................................................................... 22 1 6 3.00 18 10 5 1 2 0 0 0
.................................................................TAATAAAGCAATGAGACTGATT............................................................................................................ 22 1 2 3.00 6 5 0 0 1 0 0 0
.................................................................TTATAATGCAATGAGACTGATT............................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0 0
.................................................................TTATAAAGAAATGAGACTGATT............................................................................................................ 22 1 2 3.00 6 1 1 2 2 0 0 0
................................................................ATTATAAAGCAATGAGACTGATT............................................................................................................ 23 0 1 3.00 3 1 0 1 1 0 0 0
.................................................................TTATCAAGCAATGAGACTGAT............................................................................................................. 21 1 1 3.00 3 2 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAATC......................................................................................................... 25 2 2 3.00 6 0 0 0 0 0 2 4
.................................................................TTATAAAGCAATGAGACTGATTAG.......................................................................................................... 24 2 2 2.50 5 4 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGAG............................................................................................................. 21 1 3 2.33 7 3 2 1 1 0 0 0
.................................................................TTATAAAGTAATGAGACTGATT............................................................................................................ 22 1 8 2.25 18 12 3 0 3 0 0 0
...................................................................ATAAAGCAATGAGACTGATTTT.......................................................................................................... 22 1 4 2.25 9 6 1 1 1 0 0 0
.................................................................TTATAAAGCAAAGAGACTGAT............................................................................................................. 21 1 2 2.00 4 3 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTAAT............................................................................................................. 21 1 1 2.00 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTAATT............................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATAAAGCAATTAGACTGATTA........................................................................................................... 23 2 4 2.00 8 5 2 0 0 1 0 0
.................................................................TTATAAAGCAATGATACTGATTA........................................................................................................... 23 2 3 2.00 6 2 4 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATGATC......................................................................................................... 25 2 1 2.00 2 0 0 0 0 0 0 2
.................................................................TTATAAAGCGATGAGACTGATTT........................................................................................................... 23 2 1 2.00 2 0 1 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTGT.......................................................................................................... 24 0 1 2.00 2 0 0 1 1 0 0 0
.................................................................TTATAAAGCAACGAGACTGATA............................................................................................................ 22 2 2 2.00 4 4 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGTCTGATT............................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGTCTGAT............................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATTAAGCAATGAGACTGATT............................................................................................................ 22 1 1 2.00 2 1 0 1 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTGATC........................................................................................................ 26 3 1 2.00 2 0 0 0 0 0 2 0
.................................................................TTTTAAAGCAATGAGACTGATT............................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCACTGAGACTGAT............................................................................................................. 21 1 1 2.00 2 0 0 0 0 2 0 0
.................................................................TTATAAAGCAATCAGACTGATTATC......................................................................................................... 25 2 1 2.00 2 0 0 0 0 0 2 0
.................................................................TTATAAAGCAATGAGACTGATTAAGA........................................................................................................ 26 3 1 2.00 2 1 0 0 1 0 0 0
.................................................................TTATAAAGCAACGAGACTG............................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TAATAAAGCAATGAGACTGAT............................................................................................................. 21 1 2 2.00 4 2 0 0 2 0 0 0
.................................................................TTATAAAGCAATGCGACTGA.............................................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTGTAAAGCAATGAGACTGAT............................................................................................................. 21 1 2 2.00 4 3 0 1 0 0 0 0
.................................................................TTTTAAAGCAATGAGACTGAT............................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTTTA......................................................................................................... 25 2 1 2.00 2 0 0 0 2 0 0 0
.................................................................TTATAAAGCAATGACACTGAT............................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAAACTGATT............................................................................................................ 22 1 2 2.00 4 3 1 0 0 0 0 0
.................................................................TTATAAAGCAACGAGACTGATTA........................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0
.................................................................TTATAAATCAATGATACTGATT............................................................................................................ 22 2 9 1.78 16 14 2 0 0 0 0 0
.................................................................TTATAAAGCAATGAGAATGAT............................................................................................................. 21 1 4 1.75 7 6 1 0 0 0 0 0
.................................................................TTATAAAGAAATGAGACTGAT............................................................................................................. 21 1 3 1.67 5 1 1 1 2 0 0 0
.................................................................TCATAAAGCAATGAGACTGAT............................................................................................................. 21 1 3 1.67 5 2 1 1 1 0 0 0
.................................................................TTCTAAAGCAATGAGACTGAT............................................................................................................. 21 1 2 1.50 3 1 0 1 1 0 0 0
.................................................................TTAAAAAGCAATGAGACTGAT............................................................................................................. 21 1 2 1.50 3 1 2 0 0 0 0 0
.................................................................TTATAAAGCAATGTGACTGAT............................................................................................................. 21 1 2 1.50 3 3 0 0 0 0 0 0
...............................................................AATTATAAAGCAATGAGACTGATTA........................................................................................................... 25 2 2 1.50 3 2 1 0 0 0 0 0
.................................................................TTATAAATCAATGAGACTGATA............................................................................................................ 22 2 6 1.50 9 3 5 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGAC............................................................................................................. 21 1 2 1.50 3 3 0 0 0 0 0 0
...................................................................ATAAAGCAATGAGACTGATT............................................................................................................ 20 0 2 1.50 3 2 0 1 0 0 0 0
.................................................................TTATAAAGCAATGGGACTGAT............................................................................................................. 21 1 3 1.33 4 3 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTTATA............................................................................................................ 22 2 6 1.33 8 0 7 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAGA.......................................................................................................... 24 2 3 1.33 4 0 2 1 1 0 0 0
.................................................................GTATAAAGCAATGAGACTGATT............................................................................................................ 22 1 4 1.25 5 3 2 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTTA.............................................................................................................. 20 1 7 1.14 8 4 3 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAAT.......................................................................................................... 24 2 2 1.00 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATGAAC......................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGATACTGATA............................................................................................................ 22 2 14 1.00 14 2 11 0 1 0 0 0
................................................................CTTATAAAGCAATGAGGCTGATT............................................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................TATAAAGCAATGAGACTGA.............................................................................................................. 19 0 5 1.00 5 5 0 0 0 0 0 0
.................................................................TTATAAAGCAATAAGACTGAT............................................................................................................. 21 1 2 1.00 2 2 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTCTC......................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCGATGAGACTGATTATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 1
.................................................................TTATAAAGCAATGAGACTGATTACCA........................................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTGTA......................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................CCGTCTCAGTTACTTTATAGCATC............................................................... 24 3 2 1.00 2 0 0 0 0 0 1 1
.................................................................TTATAAAGCAATGAGACTGATTTTT......................................................................................................... 25 2 6 1.00 6 0 2 2 2 0 0 0
............................................................................................................CCGTCTCAGTTACTTTATAG................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTCTCCA....................................................................................................... 27 3 1 1.00 1 0 0 0 0 1 0 0
.................................................................TTATAAAGCAATGAGACTGCT............................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACAGAT............................................................................................................. 21 1 2 1.00 2 2 0 0 0 0 0 0
.................................................................TTATAGAGCAATGAGACTGAT............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTACC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
...........................................................................................................TCCGTCTCAGTTACTTTATATCC................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCATTGAGACTGATTA........................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0
.................................................................TTACAAAGCAATGAGACTGA.............................................................................................................. 20 1 2 1.00 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTAGCC........................................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAACGCCATGAGACTGATT............................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGT.................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATGATACTGATTATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 1
.................................................................TTATCAAGCAATGAGACTGATTATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
.......................................................................................GTCATATGTTGTTTGTGGGAT....................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGC.................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACCGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATGAAGCAATGAGACTGAT............................................................................................................. 21 1 3 1.00 3 0 2 1 0 0 0 0
................................................................CTTATAAAGCAATGAGACTGATTA........................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCGATGAGACTGATTA........................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATAATGCAATGAGACTGAT............................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................CCGTCTCAGTTACTTTATAGCCT................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCC................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCATA............................................................... 25 3 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCAATGAGACTGATCATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
...........................................................CTGACATTATAAAGCAATGAGACTGATT............................................................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCATTGAGACTGAT............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAACGCAATGAGACTGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAGGCAATGAGACTGATTATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCCATGAGACTGATTT........................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATATAGCAATGAGACTGAT............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATACAGCAATGAGACTGATTGTCATA...................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0
............................................................AGAGGTTATAAAGCAATGAGACTGATT............................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAACGAGACTGATTG........................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCATT............................................................... 25 2 1 1.00 1 0 0 0 0 0 0 1
...........................................................................................................TCCGTCTCAGTTACTTTATAGCCTC............................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCAATGAGACTGATTGA.......................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGGCTGAT............................................................................................................. 21 1 2 1.00 2 1 0 0 1 0 0 0
.................................................................TTATAAAGCCATGAGACTGATTA........................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATGGGCT........................................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGGCTGATTA........................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAACAATGAGACTGATTA........................................................................................................... 23 2 2 1.00 2 0 1 0 1 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGACTC............................................................... 25 3 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCAATTAGACTGATTT........................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATCGA.......................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TTTATAAAGCAATGAGACTGATT............................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATCAGACTGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAACGCAATGAGACTGATTTT.......................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
..................................................................TATAAAGCAATGAGACTGATTG........................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCTATGAGACTGAT............................................................................................................. 21 1 2 1.00 2 1 1 0 0 0 0 0
...............................................................GATTATAAAGCAATGAGACTGA.............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................TATAAAGCAATGAGACTGAT............................................................................................................. 20 0 3 1.00 3 3 0 0 0 0 0 0
.................................................................TTATAAAGCAATTAGACTGATTATC......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATCAAGCAATGAGACTGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAGCA................................................................. 23 1 1 1.00 1 0 0 0 0 0 0 1
.................................................................TTATAAAGCAATGAGACTGATTCTG......................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAGGCAATGAGACTGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................GTCATATGTTGTTTGTGGGATCATC................................................................................... 25 3 1 1.00 1 0 0 0 0 0 1 0
.................................................................TTATAAAGCAATGAGACTGATTGTCATA...................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0
.................................................................TTATAAAGCAGTGAGACTGA.............................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATAAA.......................................................................................................... 24 3 11 0.91 10 1 6 1 2 0 0 0
...............................................................AATTATAAAGCAATGAGACTGATA............................................................................................................ 24 2 4 0.75 3 0 2 1 0 0 0 0
...................................................................TTAAAGCAATGAGACTGATT............................................................................................................ 20 1 4 0.75 3 3 0 0 0 0 0 0
.................................................................TTATACAGCAATGAGACTGAT............................................................................................................. 21 1 4 0.75 3 1 0 0 0 2 0 0
.................................................................TCTTAAAGCAATGAGACTGATT............................................................................................................ 22 2 4 0.75 3 2 1 0 0 0 0 0
.................................................................TTATAAAGCCATGAGACTGA.............................................................................................................. 20 1 4 0.75 3 3 0 0 0 0 0 0
.................................................................TTATAAAGCCATGAGACTGATA............................................................................................................ 22 2 3 0.67 2 1 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTCA.......................................................................................................... 24 2 3 0.67 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTGAAAA....................................................................................................... 27 3 3 0.67 2 2 0 0 0 0 0 0
...................................................................ATAAAGCAATGAGACTGAT............................................................................................................. 19 0 3 0.67 2 1 0 0 1 0 0 0
.................................................................TTATAAAGCGATGAGACTGATA............................................................................................................ 22 2 3 0.67 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATCA........................................................................................................... 23 2 3 0.67 2 0 1 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGAATC........................................................................................................... 23 2 5 0.60 3 0 0 0 0 0 2 1
.................................................................TTATAAAGCAATGAGACTTATTA........................................................................................................... 23 2 5 0.60 3 2 1 0 0 0 0 0
.................................................................GTATAAAGCAATGAGACTGATTA........................................................................................................... 23 2 5 0.60 3 2 1 0 0 0 0 0
.................................................................TGATAAAGCAATGAGACTGA.............................................................................................................. 20 1 2 0.50 1 0 0 0 1 0 0 0
....................................................................TAAAGCAATGAGACTGATT............................................................................................................ 19 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGAAGATC......................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1
.................................................................TTATAAACCAATGAGACTGATA............................................................................................................ 22 2 4 0.50 2 1 1 0 0 0 0 0
.................................................................TTATAAACCAATGAGACTGATTA........................................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0
.................................................................TTATCAAGCAATGAGACTGATA............................................................................................................ 22 2 2 0.50 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAGTGAGACTGATTA........................................................................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0
.................................................................TTATAAAGCAATGAGACTGATTCG.......................................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0
................................................................ATTATAAAGCAATGAGACTGATA............................................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATGTGACTGATTA........................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGCTTT........................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTTAA......................................................................................................... 25 3 8 0.50 4 0 2 0 1 1 0 0
.................................................................TTATAAAGCAATGAGACTTATAG........................................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................AAAGCAATGAGACTGATT............................................................................................................ 18 0 2 0.50 1 0 0 1 0 0 0 0
.................................................................TTATAAAGCCATGAGACTGCTT............................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATCAAGCAATGAGACTGATTA........................................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCAACGAGACTGATTT........................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCGATGAGACTGA.............................................................................................................. 20 1 2 0.50 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATTAGGCTGATT............................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TAATAAAGCAATGAGACTGA.............................................................................................................. 20 1 2 0.50 1 0 0 1 0 0 0 0
.................................................................TTATAAATCAATTAGACTGATT............................................................................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGAGT............................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTAC.......................................................................................................... 24 2 2 0.50 1 0 0 0 0 0 0 1
.................................................................TTATAAAGCAATGCGACTGATTT........................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................TTATAAAGTAATGAGACTGAT............................................................................................................. 21 1 9 0.44 4 2 1 1 0 0 0 0
....................................................................TAAAGCAATGAGACTGATTTTA......................................................................................................... 22 2 12 0.42 5 3 1 0 1 0 0 0
.................................................................TTATAAAGCAATGAGCCTGATTA........................................................................................................... 23 2 5 0.40 2 1 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACTGTA............................................................................................................. 21 2 11 0.36 4 1 3 0 0 0 0 0
................................................................GTTATAAAGCAATGTGACTGATT............................................................................................................ 23 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATATAGCAATGAGACTGATTA........................................................................................................... 23 2 3 0.33 1 0 0 0 1 0 0 0
.................................................................TTATAAAGCAATGAGACCGAC............................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACAGATTA........................................................................................................... 23 2 3 0.33 1 0 0 1 0 0 0 0
.................................................................TTATAACGCAATGATACTGATT............................................................................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGCCTGAT............................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTCTAAAGCAATGAGACTGATA............................................................................................................ 22 2 6 0.33 2 0 1 1 0 0 0 0
.................................................................TTATAAAGCAATGGGACTGATTA........................................................................................................... 23 2 3 0.33 1 0 1 0 0 0 0 0
.................................................................TTATAGAGCAATGAGACTGA.............................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAATCAATGAGACTGATTT........................................................................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAGGCAATGAGACTGATTT........................................................................................................... 23 2 3 0.33 1 0 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGCCTGCTT............................................................................................................ 22 2 3 0.33 1 0 1 0 0 0 0 0
...............................................................AATTATAAAGCAATGAGACTGA.............................................................................................................. 22 1 3 0.33 1 0 1 0 0 0 0 0
....................................................................TAAAGCAATGAGACTGAT............................................................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAATGAGACTGATTAGAA........................................................................................................ 26 3 3 0.33 1 0 1 0 0 0 0 0
.................................................................TTATAAAACAATGAGACTGATA............................................................................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAAGCAAGGAGACTGATA............................................................................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
...................................................................ATAAAGCAATTAGACTGATT............................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0
.................................................................TTATAAATCAATGAGACTTATT............................................................................................................ 22 2 10 0.30 3 0 2 0 1 0 0 0
...................................................................ATAAAGCAATGAGACTGATTT........................................................................................................... 21 1 7 0.29 2 1 1 0 0 0 0 0
.................................................................TTATGAAGCAATGAGACTGATA............................................................................................................ 22 2 7 0.29 2 1 1 0 0 0 0 0
.................................................................TTATAAAGCAATGAGAGTGATA............................................................................................................ 22 2 4 0.25 1 0 0 0 1 0 0 0
...........................................................................................................TCCGTCTCAGTTACTTTATAAA.................................................................. 22 2 4 0.25 1 0 0 0 1 0 0 0

Anti-sense strand reads

AAAGGTCGAACTCAGAAGTTCTCCCTCGGAGTTGACTAAAGATTTTGGTAAACATGGACCACACTAATATTTCGTTACTCTGACTAACAGTATACAACAAACACCCTAGGCAGAGTCAATGAAATATCGGTATGGACCATAGAATATGGTGTCTAGTACCGGACAACTTGTTGTAAAATTTTCTCTAAAGATTTC

****************************************************..(((((.((((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))))).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:26 PM