ID:mml-mir-33a |
Coordinate:chr10:86685637-86685705 + |
Confidence:Known |
Class:Unknown |
Genomic Locale:intergenic |
[View on miRBase] [View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -46.5 |
 |
|
AGACCACCCTGGGCACCTCCCTGGCTGGCTGTACACCTCCTGGCGGGCAGCTGCGGTGCATTGTAGTTGCATTGCATGTTCTGGTGGTACCCATGCAATGTTTCCACAGTGCATTACAGAGGCCTGCCTGGCCCTCGAGAGCCTGCCCATCGTGCCCTGACCGAAGGCC
****************************************.(((((((..(((.((((((((((....((((((((((....(((...)))))))))))))....)))))))))).)))..)))))))...************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR116843 cortex |
SRR116840 epididymis |
SRR116842 seminal vesicle |
SRR116841 prostate |
SRR116844 epididymis |
SRR116845 epididymis |
SRR116839 testes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................GTGCATTGTAGTTGCATTGCA............................................................................................. | 21 | 0 | 1 | 1723.00 | 1723 | 1023 | 246 | 257 | 182 | 0 | 0 | 15 |
| .......................................................GTGCATTGTAGTTGCATTGC.............................................................................................. | 20 | 0 | 1 | 672.00 | 672 | 467 | 79 | 58 | 61 | 0 | 0 | 7 |
| .......................................................GTGCATTGTAGTTGCATTGCAA............................................................................................ | 22 | 1 | 1 | 645.00 | 645 | 357 | 97 | 77 | 108 | 0 | 0 | 6 |
| .......................................................GTGCATTGTAGTTGCATTTCA............................................................................................. | 21 | 1 | 1 | 81.00 | 81 | 54 | 10 | 0 | 14 | 0 | 0 | 3 |
| .......................................................GTGCATTGTAGTTGCATTTC.............................................................................................. | 20 | 1 | 1 | 46.00 | 46 | 37 | 4 | 0 | 4 | 0 | 0 | 1 |
| .......................................................GTGCATTGTAGTTGCATTG............................................................................................... | 19 | 0 | 1 | 36.00 | 36 | 22 | 6 | 4 | 4 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCATC........................................................................................... | 23 | 1 | 1 | 31.00 | 31 | 0 | 0 | 0 | 0 | 23 | 8 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGA.............................................................................................. | 20 | 1 | 1 | 30.00 | 30 | 6 | 12 | 6 | 6 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATTA..................................................... | 21 | 0 | 1 | 24.00 | 24 | 17 | 1 | 4 | 2 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGCA............................................................................................. | 21 | 1 | 1 | 21.00 | 21 | 17 | 4 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATT...................................................... | 20 | 0 | 1 | 19.00 | 19 | 13 | 3 | 1 | 2 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCATGATC........................................................................................ | 26 | 1 | 1 | 18.00 | 18 | 0 | 0 | 0 | 0 | 6 | 12 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGCATC........................................................................................... | 23 | 2 | 1 | 17.00 | 17 | 0 | 0 | 0 | 0 | 9 | 8 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATTAT.................................................... | 22 | 1 | 1 | 17.00 | 17 | 6 | 4 | 1 | 6 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAT............................................................................................ | 22 | 0 | 1 | 15.00 | 15 | 8 | 3 | 0 | 3 | 0 | 0 | 1 |
| .......................................................GTGCATTGTAGTTGCATTGT.............................................................................................. | 20 | 1 | 1 | 14.00 | 14 | 4 | 4 | 3 | 3 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCT............................................................................................. | 21 | 1 | 1 | 13.00 | 13 | 6 | 3 | 1 | 1 | 0 | 0 | 2 |
| .......................................................GTGCATTGTAGTTGTATTGCA............................................................................................. | 21 | 1 | 1 | 13.00 | 13 | 10 | 3 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTCAA............................................................................................ | 22 | 2 | 2 | 12.00 | 24 | 14 | 2 | 0 | 8 | 0 | 0 | 0 |
| .......................................................GTGCATTGTATTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 10.00 | 10 | 6 | 3 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTATTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 10.00 | 10 | 6 | 3 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGC.............................................................................................. | 20 | 1 | 1 | 9.00 | 9 | 8 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTTCATTGTAGTTGCATTGCATC........................................................................................... | 23 | 2 | 1 | 9.00 | 9 | 0 | 0 | 0 | 0 | 5 | 4 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAAA........................................................................................... | 23 | 2 | 1 | 7.00 | 7 | 5 | 0 | 2 | 0 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATTAA.................................................... | 22 | 1 | 1 | 7.00 | 7 | 4 | 2 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATT................................................................................................ | 18 | 0 | 1 | 7.00 | 7 | 4 | 1 | 2 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATC................................................................................................ | 18 | 1 | 2 | 6.50 | 13 | 0 | 0 | 0 | 0 | 12 | 1 | 0 |
| .......................................................GTGCATTGTGGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 6.00 | 6 | 4 | 0 | 2 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTGCATC........................................................................................... | 23 | 2 | 1 | 6.00 | 6 | 0 | 0 | 0 | 0 | 0 | 6 | 0 |
| .......................................................GTGCATTGTAGTTGTATTGC.............................................................................................. | 20 | 1 | 1 | 6.00 | 6 | 5 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGCAA............................................................................................ | 22 | 2 | 1 | 6.00 | 6 | 4 | 2 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGCTGCATTGCA............................................................................................. | 21 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTG............................................................................................... | 19 | 1 | 1 | 6.00 | 6 | 4 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAATC.......................................................................................... | 24 | 3 | 2 | 4.50 | 9 | 0 | 0 | 0 | 0 | 4 | 5 | 0 |
| .......................................................GTGCATTGTCGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTATTTGCATTGCAA............................................................................................ | 22 | 2 | 2 | 4.00 | 8 | 4 | 2 | 0 | 2 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAC............................................................................................ | 22 | 1 | 1 | 4.00 | 4 | 3 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTTTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 4.00 | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAAT........................................................................................... | 23 | 2 | 1 | 4.00 | 4 | 2 | 0 | 1 | 0 | 0 | 1 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCATTATC........................................................................................ | 26 | 2 | 1 | 4.00 | 4 | 0 | 0 | 0 | 0 | 0 | 4 | 0 |
| .......................................................GTGCATTTTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTGGTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGAA............................................................................................. | 21 | 1 | 1 | 3.00 | 3 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCAT....................................................... | 19 | 0 | 1 | 3.00 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCGTTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 3.00 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGAAA............................................................................................ | 22 | 2 | 1 | 3.00 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCCTTGCA............................................................................................. | 21 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGATGCATTGCA............................................................................................. | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCCTTGC.............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................CTCCTGGCGGGCAGCTGCG.................................................................................................................. | 19 | 0 | 1 | 2.00 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCGT............................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTACATTGTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTTTAGTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGTATTGTAGTTGCATTGCATC........................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGTA............................................................................................. | 21 | 1 | 1 | 2.00 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCTT............................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGTATTGTAGTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTGCAT............................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................................AGTGCATTGTAGTTGCATTGCA............................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAGT........................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTTCATTA..................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGCTGCATTGC.............................................................................................. | 20 | 1 | 2 | 1.50 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAATTGCATTGC.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCC............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAACA.......................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGGTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTCCATTGCATC........................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................ATTGTAGTTGCATTGCA............................................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATTATA................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTCCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................CCTCCTGGCGGGCAGCTGCG.................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTCCAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTCGTTGCATTGCAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAATTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCTACAGTGCATTA..................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAAAATC........................................................................................ | 26 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCACTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCCTGATC........................................................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ......................................................AGTGCATTGTAGTTGCATTGCAA............................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................CATTGTAGTTGCATTGCATC........................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTGCAATGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ................................................................................................AATGTTTCCACAGTGCATTA..................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCCA............................................................................................ | 22 | 2 | 2 | 1.00 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATCGC.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACATTGCATTA..................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGGATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCCTTGTAGTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTACATTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTAC.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTG............................................................................................... | 19 | 1 | 2 | 1.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTCCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................TTGCATTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCATGT.......................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGATGCATTGCAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTCGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................TTGCATTGTAGTTGCATTGCATC........................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GGGCATTGTAGTTGCATTGC.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTCCATC........................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTCCATTGTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGG.............................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCCTTGCAC............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GGGCATTGTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAGATC......................................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCATTGTAGTTGCTTTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCCTTGCAA............................................................................................ | 22 | 2 | 2 | 1.00 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATGGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGAATTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGCAAGATC........................................................................................ | 26 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................CATTGTAGTTGCATTGCAA............................................................................................ | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCCTTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................AAGTGCATTGTAGTTGCATTGC.............................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTCAT............................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGTATTGTAGTTGCATTGCAT............................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAATA.......................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTACAA............................................................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................AAGTGCATTGTAGTTGCATTGCA............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCAT................................................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CACTGTTTCCACAGTGCATTA..................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................................................GCATTGTAGTTGCATTGCAT............................................................................................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTT............................................................................................... | 19 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGTATTGTAGTTGCATTGCA............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGAATC........................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCTTTA..................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................ATTGTAGTTGCATTGCATC........................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATA...................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCG............................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAGAA.......................................................................................... | 24 | 3 | 5 | 0.60 | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTTGTTGCATTGC.............................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTCCATTGTAGTTGCATTGCATC........................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GATCATTGTAGTTGCATTGCATC........................................................................................... | 23 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTTCA............................................................................................. | 21 | 2 | 6 | 0.50 | 3 | 0 | 1 | 0 | 2 | 0 | 0 | 0 |
| .....................................TCCTGGCGGGCAGCTGCGATC............................................................................................................... | 21 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCCTTGTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTCCATTGAATC........................................................................................... | 23 | 3 | 6 | 0.50 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 0 |
| .......................................................GTACATTGTAGTTGCATTGC.............................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGTATTGTAGTTGCATTGCAA............................................................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................TTCATTGTAGTTGCATTGCA............................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGCAAATC......................................................................................... | 25 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...............................................................................................CAATGTTTCTACAGTGCATT...................................................... | 20 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTCGCATTTCA............................................................................................. | 21 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CAATGTTTCCACAGTGCATTT..................................................... | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGCTGCATTG............................................................................................... | 19 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGAATC........................................................................................... | 23 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTGCATTGCAGTTGCATTGC.............................................................................................. | 20 | 1 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .......................................................GTGCATTGCAGTTGCATTGCA............................................................................................. | 21 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTTTCGTTGCATTGCA............................................................................................. | 21 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTCT............................................................................................. | 21 | 2 | 6 | 0.33 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTTCATTGTAGTTGCATTGCATATC......................................................................................... | 25 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCATTGTAGTTGCA.................................................................................................. | 16 | 0 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTCCATTGA.............................................................................................. | 20 | 2 | 8 | 0.25 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTATTTGCATTTCA............................................................................................. | 21 | 2 | 16 | 0.25 | 4 | 2 | 0 | 0 | 2 | 0 | 0 | 0 |
| .......................................................GTGCATTGCAGTTGCATTGCAA............................................................................................ | 22 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTGA.............................................................................................. | 20 | 2 | 10 | 0.20 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCCTTGTAGTTTCATTGCATC........................................................................................... | 23 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTA.............................................................................................. | 20 | 2 | 17 | 0.18 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGC................................................................................................... | 15 | 0 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTGA.............................................................................................. | 20 | 2 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................................CCTCCTGGCGGGTAGCTGAG.................................................................................................................. | 20 | 2 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTCCATT................................................................................................ | 18 | 1 | 7 | 0.14 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTCGTTCCATTGCAA............................................................................................ | 22 | 3 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTGAAAA........................................................................................... | 23 | 3 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTCGA............................................................................................ | 22 | 3 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................TGTTCTGGTGGTACCCATGATC....................................................................... | 22 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................GTGCATTGTAGTTGCATTTAAA............................................................................................ | 22 | 3 | 20 | 0.10 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTTCATTTC.............................................................................................. | 20 | 2 | 20 | 0.10 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGCTGCATTGA.............................................................................................. | 20 | 2 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGAATTGT.............................................................................................. | 20 | 2 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTTC.............................................................................................. | 20 | 2 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................GCGTGCATTGTAGTTGCAT................................................................................................. | 19 | 2 | 15 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTATTTGCATTAC.............................................................................................. | 20 | 2 | 16 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGCAA................................................................................................. | 17 | 1 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTGT.............................................................................................. | 20 | 2 | 17 | 0.06 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................TGCATTGTAGTTGCATC................................................................................................ | 17 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTGCATTGTAGTTGTATTTCAA............................................................................................ | 22 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..........................................................TATTGTAGTTGCATTGCATC........................................................................................... | 20 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .......................................................GTTCATTGTAGTTGCATTGAATC........................................................................................... | 23 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
|
TCTGGTGGGACCCGTGGAGGGACCGACCGACATGTGGAGGACCGCCCGTCGACGCCACGTAACATCAACGTAACGTACAAGACCACCATGGGTACGTTACAAAGGTGTCACGTAATGTCTCCGGACGGACCGGGAGCTCTCGGACGGGTAGCACGGGACTGGCTTCCGG
**************************************.(((((((..(((.((((((((((....((((((((((....(((...)))))))))))))....)))))))))).)))..)))))))...**************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 09/01/2015 at 12:06 PM