ID:

mml-mir-3167

Coordinate:

chr14:127697006-127697064 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.9 -51.9 -51.9

Sense Strand Reads

CGCCTCCAGGCCTGTGCCCAGCTGTGCCCGCGACATGGCTATTGAGGCACCAGTATTTCTGAAATTCTATTTTCTGAAGTTCTTCAGGAAGGATTTCAGAAATACTGGTGCCTGGACAGCTGTGTGACTATCAGCAAGCCACAGAAACCCCTGCCCTGG

***********************************.((((.((.((((((((((((((((((((((((...(((((((....))))))))))))))))))))))))))))))).)).))))...***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
SRR116840

epididymis
SRR116845

epididymis
........................................................................................AAGGATTTCAGAAATACTGGT.................................................. 21 0 1 3.00 3 2 1 0
........................................................................................AAGGATTTCAGAAATACTGGTG................................................. 22 0 1 3.00 3 3 0 0
..........................................TGAGGCACCAGTATTTCTGAAAATC............................................................................................ 25 1 1 1.00 1 0 0 1
........................................................................................AAGGATTTCAGAAATACTGGTT................................................. 22 1 1 1.00 1 1 0 0
.......................................................................................GAAGGATTTCAGAAATACTGGT.................................................. 22 0 1 1.00 1 1 0 0
.......................................................................................GAAGGATTTCAGAAATACTGGTA................................................. 23 1 1 1.00 1 1 0 0
........................................................................................AAGGATTTCAGAAATACTGGTGT................................................ 23 1 1 1.00 1 1 0 0
........................................................................................AAGGATTTCAGAAATACTGGTGTA............................................... 24 2 1 1.00 1 1 0 0
........................................................................................AAGGATTTCAGAAATACTGTTG................................................. 22 1 1 1.00 1 1 0 0
.......................................................................................GAAGGATTTCATAAATACTGGTA................................................. 23 2 2 0.50 1 1 0 0

Anti-sense strand reads

GCGGAGGTCCGGACACGGGTCGACACGGGCGCTGTACCGATAACTCCGTGGTCATAAAGACTTTAAGATAAAAGACTTCAAGAAGTCCTTCCTAAAGTCTTTATGACCACGGACCTGTCGACACACTGATAGTCGTTCGGTGTCTTTGGGGACGGGACC

***********************************.((((.((.((((((((((((((((((((((((...(((((((....))))))))))))))))))))))))))))))).)).))))...***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:10 PM