ID:

mml-mir-3122

 Coordinate:

chr1:158879016-158879126 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-57.1 -56.7 -56.7

Sense Strand Reads

AATGAAGGTTATCCAACTCAAAATGAAGGAGTATAACTTTGGGTTTTGGTAAAAGTTACTGACCAGCTCTGTTGGGACAAGAGAACGGTCTTGTTTTGGAAGGAAGACCGTCGTTTTGTCCCAAGAGAGCTGGTAGCATGTTTCGGAAATCTGCAAGTTTCACAGTTAATTTAGTGTTCCTAGAAGTAGCTGACTAGAGATCTGACAATGT

***********************************((((((((((((....(((....(((.((((((((.(((((((((((..((((((((.(((...))).))))))))..))))))))))).)))))))))))....)))..)))))))).))))..................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis		 SRR116839

testes		 SRR116841

prostate		 SRR116842

seminal vesicle		 SRR116844

epididymis
......................................................................GTTGGGACAAGAGAACGGTCTTT...................................................................................................................... 23 1 1 12.00 12 5 4 3 0 0
......................................................................GTTGGGACAAGAGAACGGTCTT....................................................................................................................... 22 0 1 11.00 11 3 5 1 2 0
......................................................................GTTGGGACAAGAGAACGGTCTTA...................................................................................................................... 23 1 1 5.00 5 3 2 0 0 0
......................................................................GTTGGGACAAGAGAACGGTCT........................................................................................................................ 21 0 1 2.00 2 1 1 0 0 0
......................................................................GTTGTGACAAGAGAACGGTCTTT...................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
......................................................................GTTGGGACAAGAGAACGGTCTTAT..................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
......................................................................GTTAGGACAAGAGAACGGTCTTT...................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
......................................................................GTTGGGACAAGAGAACGGTCTTAAA.................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0
........................................................................................................GTACCGTCGTTTTGTCC.......................................................................................... 17 2 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TTACTTCCAATAGGTTGAGTTTTACTTCCTCATATTGAAACCCAAAACCATTTTCAATGACTGGTCGAGACAACCCTGTTCTCTTGCCAGAACAAAACCTTCCTTCTGGCAGCAAAACAGGGTTCTCTCGACCATCGTACAAAGCCTTTAGACGTTCAAAGTGTCAATTAAATCACAAGGATCTTCATCGACTGATCTCTAGACTGTTACA

***********************************((((((((((((....(((....(((.((((((((.(((((((((((..((((((((.(((...))).))))))))..))))))))))).)))))))))))....)))..)))))))).))))..................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:04 PM