ID:

mml-mir-30c-2

 Coordinate:

chr4:68772341-68772412 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature

star

  1. mml-mir-30c-1  chr1:43866500-43866523 +
  2. mml-mir-30c-2  chr4:68772383-68772406 -

Sense Strand Reads

GAGGCTTGTGCTGCTGACTGCCAACCCCGCCCTAGAGCGCACTGAGCGACAGATACTGTAAACATCCTACACTCTCAGCTGTGGAAAGTAAGAAAGCTGGGAGAAGGCTGTTTACTCTCTCTGCCTTGGAAGTCAACTAAAGAGAAATGGATTTTGAATATTTCTGCATGTC

*****************************************(((((...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....)))).)))))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis		 SRR116843

cortex		 SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116839

testes
........................................................TGTAAACATCCTACACTCTCAGCATC.......................................................................................... 26 3 2 12917.00 25834 16978 8856 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTATC......................................................................................... 27 2 2 1358.50 2717 1864 853 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACT........................................................ 20 0 1 812.00 812 0 0 329 117 182 179 5
........................................................TGTAAACATCCTACACTCTCAGCT............................................................................................ 24 0 2 631.50 1263 0 0 666 174 174 212 37
................................................................................................CTGGGAGAAGGCTGTTTACTCT...................................................... 22 0 1 554.00 554 0 0 292 129 74 52 7
................................................................................................CTGGGAGAAGGCTGTTTACTC....................................................... 21 0 1 184.00 184 0 0 93 37 36 16 2
........................................................TGTAAACATCCTACACTCTCAGATC........................................................................................... 25 2 2 163.00 326 193 133 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAATC............................................................................................ 24 3 2 106.50 213 83 130 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCCTC.......................................................................................... 26 3 2 102.00 204 97 107 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGC............................................................................................. 23 0 2 81.00 162 4 2 61 30 31 32 2
................................................................................................CTGGGAGAAGGCTGTTTACTCTATC................................................... 25 1 1 71.00 71 58 13 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCA...................................................... 22 1 1 55.00 55 0 0 23 15 10 7 0
........................................................TGTAAACATCCTACACTCTCAGCA............................................................................................ 24 1 2 49.00 98 11 16 20 16 10 22 3
................................................................................................CTGGGAGAAGGCTGTTTACTCTT..................................................... 23 1 1 40.00 40 0 0 14 17 4 4 1
................................................................................................CTGGGAGAAGGCTGTTTACTA....................................................... 21 1 1 40.00 40 0 0 11 8 10 9 2
........................................................TGTAAACATCCTACACTCTCAG.............................................................................................. 22 0 2 36.50 73 0 0 22 11 13 26 1
.................................................................................................TGGGAGAAGGCTGTTTACTCT...................................................... 21 0 1 36.00 36 0 0 22 7 4 3 0
........................................................TGTAAACATCCTACACTCTCA............................................................................................... 21 0 2 34.50 69 0 0 22 14 17 16 0
................................................................................................CTGGGAGAAGGCTGTTTACTAA...................................................... 22 2 1 27.00 27 0 0 13 2 3 9 0
................................................................................................CTGGGAGAAGGCTGTTTAC......................................................... 19 0 1 27.00 27 0 0 8 5 7 7 0
................................................................................................CTGGGAGAAGGCTGTTTA.......................................................... 18 0 1 27.00 27 0 0 6 2 10 9 0
........................................................TGTAAACATCCTACACTCTCAGCAT........................................................................................... 25 2 2 20.50 41 21 12 0 2 2 2 2
........................................................TGTAAACATCCTACACTCTCAGCAATC......................................................................................... 27 3 2 19.50 39 25 14 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTA........................................................................................... 25 1 2 18.00 36 6 6 8 2 7 6 1
.................................................................................................TGGGAGAAGGCTGTTTACTCTATC................................................... 24 1 1 17.00 17 14 3 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACA........................................................ 20 1 1 17.00 17 0 0 2 9 1 4 1
........................................................TGTAAACATCCTACACTCTCATC............................................................................................. 23 1 2 16.50 33 9 20 1 3 0 0 0
........................................................TGTAAACATCCTACACTCTCAGA............................................................................................. 23 1 2 14.50 29 0 0 3 6 7 13 0
.................................................................................................TGGGAGAAGGCTGTTTACT........................................................ 19 0 1 14.00 14 0 0 6 3 3 2 0
........................................................TGTAAACATCCTACACTCTCAGCACC.......................................................................................... 26 3 2 14.00 28 19 9 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTTC.......................................................................................... 26 2 2 13.50 27 19 8 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTT........................................................................................... 25 1 2 12.00 24 0 0 10 8 1 3 2
................................................................................................CTGGGAGAAGGCTGTTTACTTT...................................................... 22 1 1 11.00 11 0 0 6 1 2 2 0
.........................................................GTAAACATCCTACACTCTCAGCATC.......................................................................................... 25 3 4 11.00 44 33 11 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTA..................................................... 23 1 1 11.00 11 0 0 5 3 1 1 1
........................................................TGTAAACATCCTACACTCTCATCT............................................................................................ 24 1 2 10.50 21 0 0 11 2 7 0 1
........................................................TGTAAACATCCTACACTCTCAGCATT.......................................................................................... 26 2 2 10.50 21 12 9 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCCGCTATC......................................................................................... 27 3 2 10.00 20 12 8 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTTT.................................................... 24 1 1 10.00 10 0 0 2 5 2 1 0
........................................................TGTAAACATCCTACCCTCTCAGCTATC......................................................................................... 27 3 2 9.50 19 11 8 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTT....................................................... 21 1 1 9.00 9 0 0 3 2 3 1 0
................................................................................................CTGGGAGAAGGCTGTTTACTAT...................................................... 22 1 1 9.00 9 0 0 4 5 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTCTC......................................................................................... 27 2 2 8.50 17 13 4 0 0 0 0 0
..........................................................TAAACATCCTACACTCTCAGCATC.......................................................................................... 24 3 7 8.29 58 38 20 0 0 0 0 0
..........................................................TAAACATCCTACACTCTCAGCTATC......................................................................................... 25 2 2 8.00 16 15 1 0 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCTT..................................................... 22 1 1 8.00 8 0 0 6 0 0 1 1
........................................................TGTAAACATCCTACACTCTCAGCTATT......................................................................................... 27 2 2 7.50 15 12 3 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCAA..................................................... 23 2 1 7.00 7 0 0 1 2 2 2 0
........................................................TGTAAACATCCTACACTCTCAGCAA........................................................................................... 25 2 2 7.00 14 0 0 1 2 4 7 0
........................................................TGTAAACATCCTACACTCTCAGCTAT.......................................................................................... 26 1 2 7.00 14 5 4 3 1 0 0 1
........................................................TGTAAACATCCTACACTCTCAGAA............................................................................................ 24 2 2 6.00 12 0 1 3 2 2 3 1
................................................................................................CTGGGAGAAGGCTGTTTAA......................................................... 19 1 3 6.00 18 0 0 7 1 5 5 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTAA.................................................... 24 2 1 6.00 6 0 0 3 1 1 1 0
........................................................TGTAAACATCCTACACTCTCAGCGTC.......................................................................................... 26 3 2 6.00 12 11 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCCGCT............................................................................................ 24 1 2 5.50 11 0 0 4 3 1 0 3
........................................................TGTAAACATCCTCCACTCTCAGCTATC......................................................................................... 27 3 2 5.50 11 4 7 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCATA.......................................................................................... 26 3 2 5.50 11 3 8 0 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTC....................................................... 20 0 1 5.00 5 0 0 1 2 1 1 0
.......................................................CTGTAAACATCCTACACTCTCAGCATC.......................................................................................... 27 3 1 5.00 5 4 1 0 0 0 0 0
.............................................................................................AAGCTGGGAGAAGGCTGTTTACTCT...................................................... 25 0 1 5.00 5 0 0 3 1 0 0 1
........................................................TGTAAACATCCTACACTCTCAGCTC........................................................................................... 25 1 2 5.00 10 7 3 0 0 0 0 0
........................................................TGTAAACATCCTACACTC.................................................................................................. 18 0 3 4.33 13 2 4 2 2 2 1 0
........................................................TGTAAACATCTTACACTCTCAGCTATC......................................................................................... 27 3 2 4.00 8 2 6 0 0 0 0 0
.........................................................GTAAACATCCTACACTCTCAGCTATC......................................................................................... 26 2 2 4.00 8 5 3 0 0 0 0 0
........................................................TGTAAACATCCTATACTCTCAGCTATC......................................................................................... 27 3 2 4.00 8 6 2 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTT........................................................... 17 0 1 4.00 4 0 0 1 0 3 0 0
................................................................................................CTGGGAGAAGGCTGTTTAAT........................................................ 20 1 1 4.00 4 0 0 1 1 1 1 0
........................................................TGTACACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 4.00 8 6 2 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTAA.......................................................................................... 26 2 2 4.00 8 0 0 2 3 2 1 0
................................................................................................CTGGGAGAAGGCTGTTTACAA....................................................... 21 2 3 3.67 11 0 0 5 3 2 1 0
........................................................TTTAAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 3.50 7 7 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTC................................................................................................ 20 0 2 3.00 6 1 0 2 0 1 2 0
..........................................................TAAACATCCTACACTCTCAGATC........................................................................................... 23 2 2 3.00 6 3 3 0 0 0 0 0
................................................................................................CTTGGAGAAGGCTGTTTACTCTATC................................................... 25 2 1 3.00 3 3 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCATCTATC......................................................................................... 27 3 2 3.00 6 5 1 0 0 0 0 0
.........................................................TTAAACATCCTACACTCTCAGCTATC......................................................................................... 26 3 2 3.00 6 5 1 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTAT.................................................... 24 1 1 3.00 3 2 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCCATC......................................................................................... 27 3 2 2.50 5 4 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAA.............................................................................................. 22 1 2 2.50 5 0 0 0 1 2 2 0
........................................................TGTAAACATCCTACACTCTCAGCTATA......................................................................................... 27 2 2 2.50 5 4 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTGTC......................................................................................... 27 1 2 2.50 5 4 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCT................................................................................................. 19 0 2 2.50 5 0 0 0 2 2 1 0
........................................................TGTAACCATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 2.50 5 4 1 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTTA...................................................... 22 2 2 2.50 5 0 0 3 0 1 1 0
........................................................TGTAAACATCCTACACTCTCAGT............................................................................................. 23 1 2 2.50 5 0 0 1 0 1 3 0
........................................................TGTAAACATCCTACACTCTCAGAAA........................................................................................... 25 3 2 2.50 5 0 0 1 2 2 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTATC..................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCA...................................................... 21 1 1 2.00 2 0 0 0 1 1 0 0
................................................................................................CTGGGAGAAGTCTGTTTACTCT...................................................... 22 1 1 2.00 2 0 0 1 0 0 0 1
........................................................TGCAAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 2.00 4 2 2 0 0 0 0 0
................................................................................................CTGGGTGAAGGCTGTTTACT........................................................ 20 1 1 2.00 2 0 0 1 0 0 1 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTTTC................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
..................................GAGCGCACTGAGCGACAGATACATC................................................................................................................. 25 3 1 2.00 2 0 2 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTATTCT...................................................... 22 1 1 2.00 2 0 0 0 1 1 0 0
......................................................AATGTAAACATCCTACACTCTCAGCT............................................................................................ 26 1 1 2.00 2 0 0 1 0 1 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCAT..................................................... 23 2 1 2.00 2 0 0 1 1 0 0 0
........................................................TGTAAACATCCTACACTCTTAGCTATC......................................................................................... 27 3 2 2.00 4 2 2 0 0 0 0 0
................................................................................................CTGGGAGGAGGCTGTTTACT........................................................ 20 1 1 2.00 2 0 0 1 0 1 0 0
................................................................................................CTGGGAGAAGGCTTTTTACT........................................................ 20 1 1 2.00 2 0 0 1 1 0 0 0
................................................................................................CTGGGCGAAGGCTGTTTACT........................................................ 20 1 1 2.00 2 0 0 1 0 0 0 1
.................................................................................................TGGGAGAAGGCTGTTTACTCTTA.................................................... 23 2 1 2.00 2 0 0 2 0 0 0 0
................................................................................................CCGGGAGAAGGCTGTTTACT........................................................ 20 1 1 2.00 2 0 0 2 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCTA..................................................... 22 1 1 2.00 2 0 0 0 1 1 0 0
..................................................................................................GGGAGAAGGCTGTTTACTCT...................................................... 20 0 1 2.00 2 0 0 1 0 0 0 1
................................................................................................CTGGGAGAAGGCTGTTTACTTTT..................................................... 23 2 1 2.00 2 0 0 1 0 0 1 0
................................................................................................CTGGGAGAAGGCTGTTTACTCAATC................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCCCAGCTATC......................................................................................... 27 3 2 2.00 4 3 1 0 0 0 0 0
................................................................................................CTGGGAGACGGCTGTTTACT........................................................ 20 1 1 2.00 2 0 0 1 0 1 0 0
........................................................TGTAAACATCCTATACTCTCAGATC........................................................................................... 25 3 3 1.67 5 3 2 0 0 0 0 0
.........................................................TTAAACATCCTACACTCTCAGATC........................................................................................... 24 3 3 1.67 5 2 3 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGTTATC......................................................................................... 27 3 2 1.50 3 2 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCAG........................................................................................... 25 1 2 1.50 3 0 0 1 0 1 1 0
........................................................TGTAAACATCCTACACTCTCATCA............................................................................................ 24 2 2 1.50 3 0 0 1 2 0 0 0
........................................................TGTAAACATCCGACACTCTCAGCT............................................................................................ 24 1 2 1.50 3 0 0 3 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAAT............................................................................................. 23 2 2 1.50 3 2 1 0 0 0 0 0
........................................................TATAAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 1.50 3 3 0 0 0 0 0 0
........................................................TGTAAACCTCCTACACTCTCAGCTATC......................................................................................... 27 3 2 1.50 3 2 1 0 0 0 0 0
........................................................TGTAAACATCCTACCCTCTCAGCT............................................................................................ 24 1 2 1.50 3 0 0 2 1 0 0 0
........................................................TGTAAACATCATACACTCTCAGCTATC......................................................................................... 27 3 2 1.50 3 2 1 0 0 0 0 0
........................................................TTTAAACATCCTACACTCTCAGATC........................................................................................... 25 3 2 1.50 3 3 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCCGATC........................................................................................... 25 3 2 1.50 3 1 2 0 0 0 0 0
........................................................TGTAAGCATCCTACACTCTCAGCT............................................................................................ 24 1 2 1.50 3 0 0 0 0 1 0 2
........................................................TGTCAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 1.50 3 2 1 0 0 0 0 0
........................................................TCTAAACATCCTACACTCTCAGATC........................................................................................... 25 3 3 1.33 4 4 0 0 0 0 0 0
........................................................TGTTAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 3 1.33 4 2 2 0 0 0 0 0
...................................................AAGGCTGTAAACATCCTACACTCTCA............................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
........................................................TTTAAACATCCTACACTCTCAGCT............................................................................................ 24 1 2 1.00 2 0 0 1 1 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTTT.......................................................................................... 26 1 2 1.00 2 0 0 1 1 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTTAA................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0
................................................................................................ATGGGAGAAGGCTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTAGTCT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGTAGAAGGCTGTTTACT........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................ATAGGCTGGGAGAAGGCTGTTTACTCT...................................................... 27 3 1 1.00 1 0 0 0 0 1 0 0
........................................................TATAAACATCCTACACTCTCAGCT............................................................................................ 24 1 2 1.00 2 0 0 1 1 0 0 0
................................................................................................GTGGGAGAAGGCTGTTTACT........................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0
................................................................................................CTGGGAGAAGGCTGTT............................................................ 16 0 3 1.00 3 0 0 0 0 3 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTAA...................................................... 21 2 2 1.00 2 0 0 1 0 0 1 0
................................................................................................CTGGGAGAAGGCTGTTTACTGA...................................................... 22 2 2 1.00 2 0 0 1 0 0 1 0
................................................................................................CTGGGAGAAGGCTTTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGAAGAAGGCTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
................................................................................................CTGGGAGAAGGCTGTTTAATC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCTTTT................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGGAGAATGCTGTTTACTCTATC................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................CTGGTAGAAGGCTGTTTACTCA...................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................GGGAGAAGGCTGTTTACTCTATC................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
................................................................................................CTGGGAGCAGGCTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
................................................................................................CTGGGAGAAGGCTGGTTACTCT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGATGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACG........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTCTACTCTT..................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGGAGAAGGATGTTTACTC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTGCACTCTCAGCTATC......................................................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTG....................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0
............................................................................................CAGACTGGGAGAAGGCTGTTTACTCT...................................................... 26 3 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGGAGAAGGGTGTTTACTC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................GGGAGAAGGCTGTTTACTC....................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0
........................................................TGTAATCATCCTACACTCTCAGCT............................................................................................ 24 1 2 1.00 2 0 0 1 0 0 0 1
................................................................................................CTGGGAGAAGGCTGTTTATTCTATC................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACC........................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0
........................................................TGTAAACATCCTACACTCTCAGCTACC......................................................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGGTTACT........................................................ 20 1 2 1.00 2 0 0 0 0 1 1 0
................................................................................................CTGGGAGAAGACTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGGAGAAGTCTGTTTACTC....................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTAGT........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTAC.......................................................................................... 26 2 2 1.00 2 1 1 0 0 0 0 0
........................................................TGTAAACATCCTACATTCTCAGCTATC......................................................................................... 27 3 2 1.00 2 0 2 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTAG......................................................... 19 1 2 1.00 2 0 0 1 0 0 1 0
........................................................TGTAAACATCCTACACTCTCATATC........................................................................................... 25 3 2 1.00 2 0 2 0 0 0 0 0
.......................................................CTGTAAACATCCTACACTCTCAGCTATC......................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0
................................................................................................CTGGGAGACGGCTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTACACTCTCACTC............................................................................................ 24 3 2 1.00 2 1 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCGATC......................................................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCC...................................................... 22 1 1 1.00 1 0 0 0 0 0 0 1
.................................................................................................TGGGAGAAGGCTGTTTACTTTT..................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCTTTATC................................................. 26 3 2 1.00 2 2 0 0 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTTT...................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTA....................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTACACTCCCAGC............................................................................................. 23 1 2 1.00 2 0 0 0 1 1 0 0
................................................................................................CTAGGAGAAGGCTGTTTACT........................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0
........................................................GGTAAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCATCTA........................................................................................... 25 2 2 1.00 2 0 0 2 0 0 0 0
..............................................................................................AACTGGGAGAAGGCTGTTTACTC....................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
........................................................TGTAAACATTCTACACTCTCAGCTATC......................................................................................... 27 3 3 1.00 3 0 3 0 0 0 0 0
.........................................................GTAAACATCCTACACTCTCAGATC........................................................................................... 24 2 2 1.00 2 0 2 0 0 0 0 0
................................................................................................TTGGGAGAAGGCTGTTTACT........................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCTACACTCTCAT.............................................................................................. 22 1 2 1.00 2 0 1 0 0 1 0 0
.................................................................................................TGGGAGAAGGCTTTTTACTCT...................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGTTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGGTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTAC......................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGATGGCTGTTTACTCT...................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................................................CTGGGAGAAGGCAGTTTACT........................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................GCTGGGAGAAGGCTGTTTAC......................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCTACATTCTCATC............................................................................................. 23 2 2 1.00 2 2 0 0 0 0 0 0
.................................................................................................TGGGAGAAGGCTGTTTACTCC...................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0
....................................................AAGCTGTAAACATCCTACACTCTCA............................................................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0
........................................................TGTAAATATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTTCT........................................................ 20 1 5 0.80 4 0 0 1 1 1 1 0
........................................................TGTAAACATCCTACACTCTCAAATC........................................................................................... 25 3 9 0.78 7 0 7 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTATT........................................................ 20 1 4 0.75 3 0 0 2 0 0 0 1
........................................................TGTAAACATCCTACACTCTCAGTTC........................................................................................... 25 2 3 0.67 2 0 2 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGAAC........................................................................................... 25 3 3 0.67 2 0 2 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAAA............................................................................................. 23 2 6 0.67 4 0 3 0 1 0 0 0
........................................................TGCAAACATCCTACACTCTCAGATC........................................................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0
................................................................................................CTGGGAGAGGGCTGTTTACT........................................................ 20 1 5 0.60 3 0 0 2 0 0 1 0
........................................................TGTAACCATCCTACACTCTCAGATC........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCACCTTC.......................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTATCA............................................................................................... 21 1 2 0.50 1 0 0 0 0 0 1 0
........................................................TGCAAACATCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TATAAACATCCTACACTCTCAG.............................................................................................. 22 1 2 0.50 1 0 0 0 0 1 0 0
........................................................TGTAAACATCCTACACTCTCAGAATT.......................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
................................................................................................CTGGGAGCAGGCTGTTTACTA....................................................... 21 2 2 0.50 1 0 0 0 0 1 0 0
........................................................TGTAGACATCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGCAGGCTGTTTACTCTT..................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTATACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTACACTCTCAACTATC......................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCG............................................................................................ 24 1 2 0.50 1 0 0 0 0 0 0 1
.......................................................ATGTAAACATCCTACACTCTCA............................................................................................... 22 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAGCATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACATCCTACAGTCTCCGCTA........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTAGACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
.................................................................................................CTGGAGAAGGCTGTTTACTCTATC................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................TTAAACATCCTACACTCTCAGCT............................................................................................ 23 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTCAACATCCTACACTCTCA............................................................................................... 21 1 2 0.50 1 0 0 0 0 1 0 0
........................................................TGTAAACATCCTACACTCTCAACA............................................................................................ 24 2 2 0.50 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCGACACTCTCAGA............................................................................................. 23 2 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCCACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACACCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCTACACCCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTGA.......................................................................................... 26 1 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCTTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 0 0 1 0 0
................................................................................................CTGGGAGAAGGATGTTTACTCTT..................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
................................................................................................CTGTGAGAAGGCTGTTTACT........................................................ 20 1 2 0.50 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTCTAAA................................................... 25 3 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTACACCCTCAGC............................................................................................. 23 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCAC........................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCAACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
.........................................................GTAAACATCCTACACTCTCAGCA............................................................................................ 23 1 2 0.50 1 0 1 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACTGTA..................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCTACACTCTCAGTT............................................................................................ 24 1 2 0.50 1 0 0 0 1 0 0 0
..................................................AGGATCTGTAAACATCCTACACTCTCAGCT............................................................................................ 30 3 2 0.50 1 0 0 0 0 0 1 0
........................................................TGCAAACATCCTACACTCTCAGCTTC.......................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGATGTTTACT........................................................ 20 1 2 0.50 1 0 0 0 1 0 0 0
...........................................................AAACATCCTACACTCTCAGCTATC......................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCATCTT........................................................................................... 25 2 2 0.50 1 0 0 1 0 0 0 0
..........................................................TAAACATCCTACACTCTCAGCA............................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAACT............................................................................................ 24 1 2 0.50 1 0 0 0 0 0 1 0
........................................................TGTAAACATCTTACACTCTCAGC............................................................................................. 23 1 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCCGA............................................................................................. 23 2 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTCC.......................................................................................... 26 2 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCGGCTTC.......................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTAGTA....................................................... 21 2 4 0.50 2 0 0 1 1 0 0 0
........................................................TGTAAACATCCTACACTCTTAGA............................................................................................. 23 2 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCACTC......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAATATCCTACACTCTCAGATC........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACTCTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCGGCTATC......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTATTCTATT................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTACACATCCTACACTCTCAGCTTC.......................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
........................................................AGTAAACATCCTACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
.......................................................ATGTAAACATCCTACACTCTCAGCT............................................................................................ 25 1 2 0.50 1 0 0 0 1 0 0 0
........................................................TGTAAACATCCGACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACAGCCTACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACATTCTCAGATC........................................................................................... 25 3 2 0.50 1 0 1 0 0 0 0 0
................................................................................................CTGGTAGAAGTCTGTTTACTCT...................................................... 22 2 2 0.50 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCTACACTCTCAGCTACT......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCC............................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATTCTACACTCTCATC............................................................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0
........................................................AGTAAACATCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
.........................................................GTAAACATCCTACACTCTCAGCATA.......................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCC............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
................................................................................................CTGGAAGAAGGCTGTTTACT........................................................ 20 1 2 0.50 1 0 0 0 0 1 0 0
................................................................................................CTGGGAGAAGTCTGTTTACTCTT..................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGATT........................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCCT........................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
............................................................AACATCCTACACTCTCAGCTATC......................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGTAT........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
...........................................................AAACATCCTACACTCTCAGCT............................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAAC............................................................................................. 23 1 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACTTCCTACACTCTCAGCTATC......................................................................................... 27 3 2 0.50 1 0 1 0 0 0 0 0
........................................................TGTAAACATCCTACACTCTCAGCTG........................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAAGATCCTACACTCTCAGCTAT.......................................................................................... 26 2 2 0.50 1 0 0 0 0 0 1 0
........................................................TGTAAACATCCTACCCTCTCAGC............................................................................................. 23 1 2 0.50 1 0 0 0 0 1 0 0
........................................................TGTAAACATCTTACACTCTCATCT............................................................................................ 24 2 2 0.50 1 0 0 1 0 0 0 0
................................................................................................CTGGTAGAAGGCTGTTTACTCTTA.................................................... 24 3 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATTCTACACTCTCAGC............................................................................................. 23 1 2 0.50 1 0 0 0 1 0 0 0
........................................................CGTAAACATCCTACACTCTCAGATC........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
........................................................TGTAAACATACTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTACAAT...................................................... 22 2 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAACATCCCACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 0 0 0 0 1
................................................................................................CTGGGAGAAGGTTGTTTACTC....................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTAAATATCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
........................................................TGTATACATCCTACACTCTCAGCT............................................................................................ 24 1 2 0.50 1 0 0 1 0 0 0 0
.........................................................GTAAACATCCTACACTCTCAGCATT.......................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
................................................................................................CTGGGAGAAGGCTGTTTAT......................................................... 19 1 5 0.40 2 0 0 0 1 0 1 0
........................................................TGTAAACATCCTACAATC.................................................................................................. 18 1 11 0.36 4 0 4 0 0 0 0 0
................................................................................................CTGGGAGAGGGTTGTTTACTATC..................................................... 23 3 9 0.33 3 3 0 0 0 0 0 0
................................................................................................CTGGCAGAAGGCTGTTTACT........................................................ 20 1 3 0.33 1 0 0 0 0 1 0 0
........................................................TGTAAACATCCTACCCTCTCAGCTTC.......................................................................................... 26 3 3 0.33 1 1 0 0 0 0 0 0
........................................................TGTAAACATCCTAGACTCTCAGCTATC......................................................................................... 27 3 3 0.33 1 0 1 0 0 0 0 0
........................................................TGCAAACATCCTACACTCTCAGCAT........................................................................................... 25 3 3 0.33 1 0 1 0 0 0 0 0

Anti-sense strand reads

CTCCGAACACGACGACTGACGGTTGGGGCGGGATCTCGCGTGACTCGCTGTCTATGACATTTGTAGGATGTGAGAGTCGACACCTTTCATTCTTTCGACCCTCTTCCGACAAATGAGAGAGACGGAACCTTCAGTTGATTTCTCTTTACCTAAAACTTATAAAGACGTACAG

*****************************************(((((...((((....(((((((.(((...(((((((((..............))))))))).))).)))))))....)))).)))))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:23 PM