ID:

mml-mir-30c-1

Coordinate:

chr1:43866484-43866572 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.3 -34.3 -34.1
mature

  1. mml-mir-30c-1  chr1:43866500-43866523 +
  2. mml-mir-30c-2  chr4:68772383-68772406 -
star

Sense Strand Reads

TTCTGTGTCAGTGGTCAGGGGCTGACCAACCCTGGACCCTGTGGGCTATAACCATGCTGTAGTGTGTGTAAACATCCTACACTCTCAGCTGTGAGCTCAAGGTGGCTGGGAGAGGGTTGTTTACTCCTTCTGCCATGGAAAACATCAGCTGAAGAAGGAACAGTCTCCACTCCGCAGATCGGACAGAAT

***************************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))..*************************************************
Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis
SRR116844

epididymis
SRR116843

cortex
SRR116842

seminal vesicle
SRR116841

prostate
SRR116840

epididymis
SRR116839

testes
..................................................................TGTAAACATCCTACACTCTCAGCATC................................................................................................. 26 3 2 12917.00 25834 16978 8856 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATC................................................................................................ 27 2 2 1358.50 2717 1864 853 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCT................................................................................................... 24 0 2 631.50 1263 0 0 666 212 174 174 37
..................................................................TGTAAACATCCTACACTCTCAGATC.................................................................................................. 25 2 2 163.00 326 193 133 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAATC................................................................................................... 24 3 2 106.50 213 83 130 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCCTC................................................................................................. 26 3 2 102.00 204 97 107 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGC.................................................................................................... 23 0 2 81.00 162 4 2 61 32 30 31 2
..................................................................TGTAAACATCCTACACTCTCAGCA................................................................................................... 24 1 2 49.00 98 11 16 20 22 16 10 3
.........................................................................................................CTGGGAGAGGGTTGTTTACT................................................................ 20 0 1 48.00 48 0 0 18 14 9 7 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTC............................................................... 21 0 1 39.00 39 0 0 23 6 5 5 0
..................................................................TGTAAACATCCTACACTCTCAG..................................................................................................... 22 0 2 36.50 73 0 0 22 26 11 13 1
..................................................................TGTAAACATCCTACACTCTCA...................................................................................................... 21 0 2 34.50 69 0 0 22 16 14 17 0
..................................................................TGTAAACATCCTACACTCTCAGCAT.................................................................................................. 25 2 2 20.50 41 21 12 0 2 2 2 2
..................................................................TGTAAACATCCTACACTCTCAGCAATC................................................................................................ 27 3 2 19.50 39 25 14 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTA.................................................................................................. 25 1 2 18.00 36 6 6 8 6 2 7 1
..................................................................TGTAAACATCCTACACTCTCATC.................................................................................................... 23 1 2 16.50 33 9 20 1 0 3 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCC.............................................................. 22 0 1 16.00 16 0 0 6 2 4 4 0
..................................................................TGTAAACATCCTACACTCTCAGA.................................................................................................... 23 1 2 14.50 29 0 0 3 13 6 7 0
..................................................................TGTAAACATCCTACACTCTCAGCACC................................................................................................. 26 3 2 14.00 28 19 9 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTC................................................................................................. 26 2 2 13.50 27 19 8 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTT.................................................................................................. 25 1 2 12.00 24 0 0 10 3 8 1 2
...................................................................GTAAACATCCTACACTCTCAGCATC................................................................................................. 25 3 4 11.00 44 33 11 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATCT................................................................................................... 24 1 2 10.50 21 0 0 11 0 2 7 1
..................................................................TGTAAACATCCTACACTCTCAGCATT................................................................................................. 26 2 2 10.50 21 12 9 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCCGCTATC................................................................................................ 27 3 2 10.00 20 12 8 0 0 0 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTATC................................................................................................ 27 3 2 9.50 19 11 8 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTCTC................................................................................................ 27 2 2 8.50 17 13 4 0 0 0 0 0
....................................................................TAAACATCCTACACTCTCAGCATC................................................................................................. 24 3 7 8.29 58 38 20 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCA.............................................................. 22 1 1 8.00 8 0 0 5 0 2 1 0
....................................................................TAAACATCCTACACTCTCAGCTATC................................................................................................ 25 2 2 8.00 16 15 1 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACT................................................................ 19 0 1 8.00 8 0 0 4 3 1 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATT................................................................................................ 27 2 2 7.50 15 12 3 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAA.................................................................................................. 25 2 2 7.00 14 0 0 1 7 2 4 0
..................................................................TGTAAACATCCTACACTCTCAGCTAT................................................................................................. 26 1 2 7.00 14 5 4 3 0 1 0 1
..................................................................TGTAAACATCCTACACTCTCAGAA................................................................................................... 24 2 2 6.00 12 0 1 3 3 2 2 1
..................................................................TGTAAACATCCTACACTCTCAGCGTC................................................................................................. 26 3 2 6.00 12 11 1 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTC............................................................... 20 0 1 6.00 6 0 0 5 0 0 1 0
..................................................................TGTAAACATCCTCCACTCTCAGCTATC................................................................................................ 27 3 2 5.50 11 4 7 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCCGCT................................................................................................... 24 1 2 5.50 11 0 0 4 0 3 1 3
..................................................................TGTAAACATCCTACACTCTCAGCATA................................................................................................. 26 3 2 5.50 11 3 8 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTC.................................................................................................. 25 1 2 5.00 10 7 3 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCT............................................................. 23 0 1 5.00 5 0 0 2 2 0 0 1
..................................................................TGTAAACATCCTACACTC......................................................................................................... 18 0 3 4.33 13 2 4 2 1 2 2 0
..................................................................TGTAAACATCTTACACTCTCAGCTATC................................................................................................ 27 3 2 4.00 8 2 6 0 0 0 0 0
..................................................................TGTAAACATCCTATACTCTCAGCTATC................................................................................................ 27 3 2 4.00 8 6 2 0 0 0 0 0
...................................................................GTAAACATCCTACACTCTCAGCTATC................................................................................................ 26 2 2 4.00 8 5 3 0 0 0 0 0
..................................................................TGTACACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 4.00 8 6 2 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCA............................................................. 23 1 1 4.00 4 0 0 3 0 1 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTAC................................................................. 19 0 1 4.00 4 0 0 3 1 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAA................................................................................................. 26 2 2 4.00 8 0 0 2 1 3 2 0
..................................................................TTTAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 3.50 7 7 0 0 0 0 0 0
...................................................................TTAAACATCCTACACTCTCAGCTATC................................................................................................ 26 3 2 3.00 6 5 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTC....................................................................................................... 20 0 2 3.00 6 1 0 2 2 0 1 0
..................................................................TGTAAACATCCTACACTCTCATCTATC................................................................................................ 27 3 2 3.00 6 5 1 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTCC.............................................................. 21 0 1 3.00 3 0 0 2 1 0 0 0
....................................................................TAAACATCCTACACTCTCAGATC.................................................................................................. 23 2 2 3.00 6 3 3 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCCATC................................................................................................ 27 3 2 2.50 5 4 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCT........................................................................................................ 19 0 2 2.50 5 0 0 0 1 2 2 0
..................................................................TGTAAACATCCTACACTCTCAA..................................................................................................... 22 1 2 2.50 5 0 0 0 2 1 2 0
..................................................................TGTAACCATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 2.50 5 4 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTGTC................................................................................................ 27 1 2 2.50 5 4 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGAAA.................................................................................................. 25 3 2 2.50 5 0 0 1 0 2 2 0
..................................................................TGTAAACATCCTACACTCTCAGT.................................................................................................... 23 1 2 2.50 5 0 0 1 3 0 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTATA................................................................................................ 27 2 2 2.50 5 4 1 0 0 0 0 0
..................................................................TGCAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 2.00 4 2 2 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCCCAGCTATC................................................................................................ 27 3 2 2.00 4 3 1 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTA.................................................................. 18 0 1 2.00 2 0 0 1 0 1 0 0
................................................................GGTGTAAACATCCTACACTCTCAGCT................................................................................................... 26 1 1 2.00 2 0 0 0 1 1 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCTATC........................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTA............................................................... 21 1 1 2.00 2 0 0 0 1 1 0 0
..................................................................TGTAAACATCCTACACTCTTAGCTATC................................................................................................ 27 3 2 2.00 4 2 2 0 0 0 0 0
..................................................................TGTAAACATCCTATACTCTCAGATC.................................................................................................. 25 3 3 1.67 5 3 2 0 0 0 0 0
...................................................................TTAAACATCCTACACTCTCAGATC.................................................................................................. 24 3 3 1.67 5 2 3 0 0 0 0 0
..................................................................TGTCAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 1.50 3 2 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGTTATC................................................................................................ 27 3 2 1.50 3 2 1 0 0 0 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCT................................................................................................... 24 1 2 1.50 3 0 0 2 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAG.................................................................................................. 25 1 2 1.50 3 0 0 1 1 0 1 0
..................................................................TGTAAGCATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 0 0 0 0 0 1 2
..................................................................TGTAAACATCCGACACTCTCAGCT................................................................................................... 24 1 2 1.50 3 0 0 3 0 0 0 0
..................................................................TATAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 1.50 3 3 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATCA................................................................................................... 24 2 2 1.50 3 0 0 1 0 2 0 0
..................................................................TGTAAACATCATACACTCTCAGCTATC................................................................................................ 27 3 2 1.50 3 2 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAAT.................................................................................................... 23 2 2 1.50 3 2 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCCGATC.................................................................................................. 25 3 2 1.50 3 1 2 0 0 0 0 0
..................................................................TGTAAACCTCCTACACTCTCAGCTATC................................................................................................ 27 3 2 1.50 3 2 1 0 0 0 0 0
..................................................................TTTAAACATCCTACACTCTCAGATC.................................................................................................. 25 3 2 1.50 3 3 0 0 0 0 0 0
..................................................................TCTAAACATCCTACACTCTCAGATC.................................................................................................. 25 3 3 1.33 4 4 0 0 0 0 0 0
..................................................................TGTTAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 3 1.33 4 2 2 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTCTTT............................................................ 23 1 1 1.00 1 0 0 0 0 0 1 0
.............................................................CGGAGTGTAAACATCCTACACTCTCAGCT................................................................................................... 29 3 1 1.00 1 0 0 0 0 1 0 0
..................................................................TATAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.00 2 0 0 1 0 1 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTA............................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTCCAT............................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................TTGGGAGAGGGTTGTTTACT................................................................ 20 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................TGTAAACATCCTACATTCTCATC.................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
..................................................................TGTAAACATTCTACACTCTCAGCTATC................................................................................................ 27 3 3 1.00 3 0 3 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCACTC................................................................................................... 24 3 2 1.00 2 1 1 0 0 0 0 0
..................................................................GGTAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 1.00 2 2 0 0 0 0 0 0
...................................................................................................AGGTGGCTGGGAGAGGGTT....................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCAA............................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAC................................................................................................. 26 2 2 1.00 2 1 1 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCT.............................................................. 22 1 1 1.00 1 0 0 0 0 0 1 0
..........................................................................................................TGGGAGAGGGTTGTTTACTCA.............................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0
.............................................CTATAACCATGCTGTAGTGTGATC........................................................................................................................ 24 3 2 1.00 2 2 0 0 0 0 0 0
..................................................................TGTAAATATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 1.00 2 2 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATCTA.................................................................................................. 25 2 2 1.00 2 0 0 2 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCGATC................................................................................................ 27 3 2 1.00 2 2 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTAGAGGT............................................................................................ 31 3 1 1.00 1 0 0 0 0 1 0 0
.............................................CTATAACCATGCTGTAGTGTG........................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................................CTGGGTGAGGGTTGTTTACT................................................................ 20 1 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCCAT............................................................ 24 1 1 1.00 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATATC.................................................................................................. 25 3 2 1.00 2 0 2 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCG.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTCTACTCCT............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAT..................................................................................................... 22 1 2 1.00 2 0 1 0 0 0 1 0
..................................................................TTTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.00 2 0 0 1 0 1 0 0
..........................................................................................................TGGGAGAGGGTAGTTTACTCCT............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................TGGCTGGGAGAGGGTTGTTTACTC............................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................TGTAATCATCCTACACTCTCAGCT................................................................................................... 24 1 2 1.00 2 0 0 1 0 0 0 1
..................................................................TGTAAACATCCTGCACTCTCAGCTATC................................................................................................ 27 3 2 1.00 2 2 0 0 0 0 0 0
...................................................................GTAAACATCCTACACTCTCAGATC.................................................................................................. 24 2 2 1.00 2 0 2 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCATC............................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCCCAGC.................................................................................................... 23 1 2 1.00 2 0 0 0 0 1 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTTT................................................................................................. 26 1 2 1.00 2 0 0 1 0 1 0 0
..................................................................TGTAAACATCCTACATTCTCAGCTATC................................................................................................ 27 3 2 1.00 2 0 2 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTACC................................................................................................ 27 3 2 1.00 2 2 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAAATC.................................................................................................. 25 3 9 0.78 7 0 7 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGTTC.................................................................................................. 25 2 3 0.67 2 0 2 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGAAC.................................................................................................. 25 3 3 0.67 2 0 2 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAAA.................................................................................................... 23 2 6 0.67 4 0 3 0 0 1 0 0
..................................................................TGCAAACATCCTACACTCTCAGATC.................................................................................................. 25 3 3 0.67 2 2 0 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTAA................................................................. 19 1 3 0.67 2 0 0 0 1 0 0 1
.........................................................................................................CTGGGAGAGGGCTGTTTACT................................................................ 20 1 5 0.60 3 0 0 2 1 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGTAT.................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTACACATCCTACACTCTCAGCTTC................................................................................................. 26 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACCCTCAGC.................................................................................................... 23 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACAGTCTCCGCTA.................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAACA................................................................................................... 24 2 2 0.50 1 0 0 0 1 0 0 0
......................................................................AACATCCTACACTCTCAGCTATC................................................................................................ 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................AAACATCCTACACTCTCAGCTATC................................................................................................ 24 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................AGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
............................................................AGGATCTGTAAACATCCTACACTCTCAGCT................................................................................................... 30 3 2 0.50 1 0 0 0 1 0 0 0
..................................................................TGTATACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
.................................................................ATGTAAACATCCTACACTCTCA...................................................................................................... 22 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCTTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCCGA.................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTTAGA.................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCAACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTATACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 0 0 1 0 0
..................................................................TATAAACATCCTACACTCTCAG..................................................................................................... 22 1 2 0.50 1 0 0 0 0 0 1 0
..................................................................TGTAAACATCCTAGACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................CGTAAACATCCTACACTCTCAGATC.................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTCC................................................................................................. 26 2 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAC.................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATTCTACACTCTCAGC.................................................................................................... 23 1 2 0.50 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCGGCTTC................................................................................................. 26 3 2 0.50 1 0 1 0 0 0 0 0
...................................................................GTAAACATCCTACACTCTCAGCA................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTAT.............................................................. 22 2 2 0.50 1 0 0 0 1 0 0 0
..................................................................TGTAAACATCCTACATTCTCAGATC.................................................................................................. 25 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGCAAACATCCTACACTCTCAGCTTC................................................................................................. 26 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAAGATCCTACACTCTCAGCTAT................................................................................................. 26 2 2 0.50 1 0 0 0 1 0 0 0
..................................................................TGTAACCATCCTACACTCTCAGATC.................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................AAACATCCTACACTCTCAGCT................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAGCATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCCACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 0 0 0 0 1
..................................................................TGTAAACATACTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACTTCCTACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTGA................................................................................................. 26 1 2 0.50 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCAGCACTC................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCACCTTC................................................................................................. 26 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCTTACACTCTCATCT................................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATTCTACACTCTCATC.................................................................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTCAACATCCTACACTCTCA...................................................................................................... 21 1 2 0.50 1 0 0 0 0 0 1 0
..................................................................TGTAAACATCCTACCCTCTCAGC.................................................................................................... 23 1 2 0.50 1 0 0 0 0 0 1 0
..................................................................TGTAAACACCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 0 1 0 0 0
....................................................................TAAACATCCTACACTCTCAGCA................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0
...................................................................GTAAACATCCTACACTCTCAGCATT................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCC................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGATT.................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGAATT................................................................................................. 26 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTACT................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACTCTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAATATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAAC.................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTATCA...................................................................................................... 21 1 2 0.50 1 0 0 0 1 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACC................................................................ 19 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACAGCCTACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................AGTAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCGACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 1 0 0 0 0 0 0
...................................................................GTAAACATCCTACACTCTCAGCATA................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATCTT.................................................................................................. 25 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCTTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 0 0 0 1 0
..................................................................TGTAAATATCCTACACTCTCAGATC.................................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAAACATCCCACACTCTCAGCTATC................................................................................................ 27 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAGACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTAAT................................................................ 20 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAACTATC................................................................................................ 27 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................CTGGGAGAAGGTTGTTTACTC............................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0
...................................................................TTAAACATCCTACACTCTCAGCT................................................................................................... 23 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCG................................................................................................... 24 1 2 0.50 1 0 0 0 0 0 0 1
..................................................................TGTAAACATCCTACACTCTCAGTT................................................................................................... 24 1 2 0.50 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCGGCTATC................................................................................................ 27 3 2 0.50 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAACT................................................................................................... 24 1 2 0.50 1 0 0 0 1 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCCT.................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCT................................................................................................... 25 1 2 0.50 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACACTCTCC...................................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTG.................................................................................................. 25 0 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCGACACTCTCAGA.................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACCCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
..................................................................TGCAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTAA.............................................................. 22 2 7 0.43 3 0 0 0 1 2 0 0
..................................................................TGTAAACATCCTACAATC......................................................................................................... 18 1 11 0.36 4 0 4 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCAGTAC.................................................................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0
.......................................................................ACATCCTACACTCTCAGCTATC................................................................................................ 22 2 3 0.33 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTAGACTCTCAGCTATC................................................................................................ 27 3 3 0.33 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTCTCATCAT.................................................................................................. 25 3 3 0.33 1 0 1 0 0 0 0 0
..................................................................TGCAAACATCCTACACTCTCAGCAT.................................................................................................. 25 3 3 0.33 1 0 1 0 0 0 0 0
..................................................................TGTAAACATCCTACACTAGCATC.................................................................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCAA............................................................. 23 2 3 0.33 1 0 0 0 0 0 1 0
..................................................................TGTAAACATCCTACACTCTCAGTAA.................................................................................................. 25 3 3 0.33 1 0 0 0 0 0 1 0
..................................................................TATAAACATCCTACACTCTCAGCAC.................................................................................................. 25 3 3 0.33 1 0 0 0 0 1 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTTC................................................................................................. 26 3 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................CCGGGAGAGGGTTGTTTACTATT............................................................. 23 3 3 0.33 1 0 0 0 1 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTTA.............................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACAA............................................................... 21 2 3 0.33 1 0 0 0 1 0 0 0
..................................................................TCTAAACATCCTACACTCTCAGCTATC................................................................................................ 27 3 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTATC............................................................. 23 3 9 0.33 3 3 0 0 0 0 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTC.................................................................................................. 25 2 3 0.33 1 0 1 0 0 0 0 0
..................................................................TGTAAACACCCTATACTCTCAGCTA.................................................................................................. 25 3 3 0.33 1 0 0 0 0 0 1 0
..................................................................TGTAAACATCCTACAC........................................................................................................... 16 0 4 0.25 1 1 0 0 0 0 0 0
..................................................................TGTGAACATCCTACACTCT........................................................................................................ 19 1 4 0.25 1 0 0 0 1 0 0 0
...................................................................TTAAACATCCTACACTCTCAGCAT.................................................................................................. 24 3 4 0.25 1 1 0 0 0 0 0 0
..................................................................TGTAAACCTCCTACACTCTCAGATC.................................................................................................. 25 3 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACTAA.............................................................. 21 2 10 0.20 2 0 0 0 2 0 0 0
..................................................................TGTAAACATCCTACACTCTCAAAT................................................................................................... 24 2 5 0.20 1 0 0 0 0 1 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTAGA................................................................ 20 2 7 0.14 1 0 0 1 0 0 0 0
..................................................................TGTAAACATCCTACACTCAAA...................................................................................................... 21 2 8 0.13 1 0 0 0 0 0 1 0
.......................................................................ACATCCTACACTCTCAGATC.................................................................................................. 20 2 16 0.13 2 2 0 0 0 0 0 0
..........................................................................................................TGGGAGAGGGTTGTTTACAA............................................................... 20 2 15 0.07 1 0 0 0 1 0 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTAGA............................................................. 23 3 16 0.06 1 0 0 0 1 0 0 0

Anti-sense strand reads

AAGACACAGTCACCAGTCCCCGACTGGTTGGGACCTGGGACACCCGATATTGGTACGACATCACACACATTTGTAGGATGTGAGAGTCGACACTCGAGTTCCACCGACCCTCTCCCAACAAATGAGGAAGACGGTACCTTTTGTAGTCGACTTCTTCCTTGTCAGAGGTGAGGCGTCTAGCCTGTCTTA

*************************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))..***************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:03 PM