ID:

mml-mir-302b

 Coordinate:

chr5:106771519-106771594 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TCTCCTCAGCTTTAACTACTCTCAAGTCCAAAGAAGTTGTATGTGGGTGGGCTCCCTTCAACTTTAACATGGAAGTGCTTTCTGTGACTTTAAAATAAGTAAGTGCTTCCATGTTTTAGTAGGAGTGAATCCAACTTACTTCTCCAAAATAGAACATGCTAACTTCACTCTCCTTA

***********************************.......(((((((((.((.((((.(((..(((((((((((((((.((..............)).)))))))))))))))..))).)))).)).))).))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
...................................................................................................TACGTGCTTCCATGTTTTAGTAA...................................................... 23 2 1 1.00 1 1
...................................................................................................TAAGTGCTTCCATGTTTTAGTAA...................................................... 23 1 1 1.00 1 1
...............................................................................................................TGTTTTCTTAGGAGTGAATC............................................. 20 2 20 0.05 1 1

Anti-sense strand reads

AGAGGAGTCGAAATTGATGAGAGTTCAGGTTTCTTCAACATACACCCACCCGAGGGAAGTTGAAATTGTACCTTCACGAAAGACACTGAAATTTTATTCATTCACGAAGGTACAAAATCATCCTCACTTAGGTTGAATGAAGAGGTTTTATCTTGTACGATTGAAGTGAGAGGAAT

***********************************.......(((((((((.((.((((.(((..(((((((((((((((.((..............)).)))))))))))))))..))).)))).)).))).))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116839

testes
.........................CAGGTTTCTTCAACA........................................................................................................................................ 15 0 8 0.25 2 2

Generated: 09/01/2015 at 12:24 PM