ID:

mml-mir-29b-2

 Coordinate:

chr1:163153293-163153373 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.3 -35.3 -35.0
mature

  1. mml-mir-29b-2  chr1:163153344-163153366 +
  2. mml-mir-29b-1  chr3:169845539-169845561 -
star

Sense Strand Reads

GGCTGGGTCTTCCGATTGAATCTCCCTTCTTTCTTCATTGAGATCCTCTTCTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTTTTCCATCTTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAGTAAGAATTGCAGCACAGCCAAGGGTGGACTGCAGAGGAACTGCTGCTCAT

*********************************************.(((((((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))))))).))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116840

epididymis		 SRR116839

testes
.....................................................................................................TAGCACCATTTGAAATCAGTGTT......................................................... 23 0 2 4562.00 9124 6211 1 0 1218 965 682 47
.....................................................................................................TAGCACCATTTGAAATCAGTGTTATC...................................................... 26 2 2 4334.50 8669 0 5518 3151 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGT.......................................................... 22 0 2 1389.50 2779 1692 0 1 448 318 307 13
.....................................................................................................TAGCACCATTTGAAATCAGTGTTT........................................................ 24 0 1 570.00 570 343 0 0 69 123 32 3
.....................................................................................................TAGCACCATTTGAAATCAGTGTATC....................................................... 25 2 1 285.00 285 0 167 118 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTA......................................................... 23 1 2 237.00 474 189 0 1 164 57 60 3
.....................................................................................................TAGCACCATTTGAAATCAGTG........................................................... 21 0 2 167.00 334 103 2 0 92 26 109 2
.......................................................................................................GCACCATTTGAAATCAGTGTTATC...................................................... 24 2 2 158.00 316 0 183 133 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTA........................................................ 24 1 2 143.00 286 197 13 16 24 25 9 2
.....................................................................................................TAGCACCATTTGAAATCAGTGTAATC...................................................... 26 3 2 131.50 263 0 204 59 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTATC......................................................... 23 3 5 98.60 493 0 350 143 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTATC......................................................... 23 2 2 75.00 150 0 102 48 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAATC....................................................... 25 3 1 72.00 72 0 56 16 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAATC............................................................................................... 26 2 1 63.00 63 0 56 7 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGA.......................................................... 22 1 2 61.50 123 20 14 4 40 10 34 1
............................................................CTGGTTTCACATGGTGGCTTAGA.................................................................................................. 23 0 1 51.00 51 27 0 0 14 4 6 0
............................................................CTGGTTTCACATGGTGGCTTAG................................................................................................... 22 0 1 51.00 51 25 0 0 11 5 10 0
...................................................................................................AATAGCACCATTTGAAATCAGTGTT......................................................... 25 2 2 47.50 95 61 0 0 16 10 7 1
.....................................................................................................TAGCACCATTTGAAATCAGT............................................................ 20 0 2 44.50 89 41 0 0 17 10 21 0
.....................................................................................................TAGCACCATTTGAAATCATTGTT......................................................... 23 1 2 42.00 84 57 0 0 0 13 11 3
.....................................................................................................TAGCACCATTTGAAATCAGTTTT......................................................... 23 1 2 35.00 70 56 0 0 0 6 7 1
.....................................................................................................TAGCACCATTTGAAATCGGTTTTTT....................................................... 25 2 1 34.00 34 1 0 0 1 31 1 0
.....................................................................................................TAGCACCATTTTAAATCAGTGTT......................................................... 23 1 2 29.50 59 52 0 0 0 5 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAA........................................................ 24 2 2 26.00 52 25 2 1 13 6 5 0
.....................................................................................................TAGCACCATTTGAAATCAG............................................................. 19 0 2 24.50 49 27 0 0 8 9 5 0
.....................................................................................................TAGCACCATTTGAAATCATTGTTATC...................................................... 26 3 2 24.00 48 0 37 11 0 0 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTTATC...................................................... 26 3 2 24.00 48 0 30 18 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTTT.......................................................... 22 1 2 21.50 43 29 0 0 1 8 5 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGTTATC...................................................... 26 3 2 19.50 39 0 22 17 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTG........................................................... 22 0 2 18.00 36 11 0 0 14 5 6 0
.....................................................................................................TAGCACCATTTGAAATCGGTAT.......................................................... 22 2 4 18.00 72 8 0 1 30 19 14 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAA....................................................... 25 2 2 17.50 35 27 0 0 1 6 1 0
.....................................................................................................TAGCACCATTTGAAATCGGTTTTT........................................................ 24 2 2 15.00 30 1 0 0 5 24 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTTATC...................................................... 26 3 3 15.00 45 0 30 15 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTATA...................................................... 26 1 1 15.00 15 0 9 6 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGAATC............................................................................................... 27 2 1 15.00 15 0 12 3 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGT.......................................................... 23 0 2 14.50 29 13 0 0 3 9 4 0
.............................................................TGGTTTCACATGGTGGCTTAGAATC............................................................................................... 25 2 1 14.00 14 0 10 4 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAT......................................................... 23 1 2 14.00 28 10 13 2 0 1 2 0
............................................................CTGGTTTCACATGGTGGCTTAGATC................................................................................................ 25 1 1 14.00 14 0 5 9 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCTGTTT.......................................................... 22 2 5 13.40 67 6 0 0 0 49 12 0
.....................................................................................................TAGCACCATTTGAAATCATTGT.......................................................... 22 1 2 13.00 26 22 0 0 1 1 2 0
.....................................................................................................TAGCACCATTTTAAATCAGTGTTATC...................................................... 26 3 2 12.50 25 0 10 15 0 0 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTATC...................................................... 26 3 3 11.67 35 0 24 11 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTATC...................................................... 26 3 2 11.50 23 0 8 15 0 0 0 0
.............................................................TGGTTTCACATGGTGGCTTAGA.................................................................................................. 22 0 1 11.00 11 5 0 0 1 0 3 2
...........................................................GCTGGTTTCACATGGTGGCTTAG................................................................................................... 23 0 1 11.00 11 5 0 0 3 2 1 0
....................................................................................................CTAGCACCATTTGAAATCAGT............................................................ 21 0 2 11.00 22 7 0 0 4 5 6 0
.....................................................................................................TAGCACCATTTGAAATCCGTGTTATC...................................................... 26 3 2 10.50 21 0 12 9 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGA.................................................................................................. 24 0 1 10.00 10 8 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAT........................................................ 24 1 1 10.00 10 2 1 2 1 4 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTT......................................................... 23 1 2 10.00 20 17 0 0 2 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAT....................................................... 25 1 2 10.00 20 0 16 3 0 1 0 0
.....................................................................................................TAGCACCATTTTAAATCAGTGT.......................................................... 22 1 2 9.50 19 10 0 0 0 4 4 1
....................................................................................................ATAGCACCATTTGAAATCAGTGTT......................................................... 24 1 2 9.50 19 15 0 0 1 2 1 0
......................................................................................................AGCACCATTTGAAATCAGTGTTATC...................................................... 25 2 2 9.50 19 0 9 10 0 0 0 0
.....................................................................................................TAGCACCATTTGAAAT................................................................ 16 0 6 9.33 56 3 0 0 28 13 12 0
....................................................................................................CTAGCACCATTTGAAATCAGTGAATC....................................................... 26 3 1 9.00 9 0 7 2 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGTATC....................................................... 26 2 1 9.00 9 0 7 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTC...................................................... 26 1 1 9.00 9 0 4 5 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTCATC...................................................... 26 3 2 9.00 18 0 12 6 0 0 0 0
.....................................................................................................TAGCACCATCTGAAATCGGTTTTTT....................................................... 25 3 2 8.50 17 0 0 0 2 15 0 0
.....................................................................................................TAGCCCCATTTGAAATCAGTGTTATC...................................................... 26 3 3 8.00 24 0 14 10 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAT................................................................................................. 24 0 1 8.00 8 6 0 0 1 0 1 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGTT......................................................... 23 1 2 7.50 15 11 0 0 3 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTT....................................................... 25 0 1 7.00 7 1 0 0 0 6 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTTATC...................................................... 26 3 2 7.00 14 0 13 1 0 0 0 0
.....................................................................................................TAGCACCATTTGCAATCAGTGTTATC...................................................... 26 3 2 7.00 14 0 9 5 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCA.............................................................. 18 0 2 7.00 14 2 0 0 5 4 3 0
............................................................CTGGTTTCACATGGTGTCTTAGAATC............................................................................................... 26 3 1 6.00 6 0 6 0 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTA.................................................................................................... 21 0 1 6.00 6 4 0 0 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCA......................................................... 23 2 2 6.00 12 1 0 0 8 2 1 0
.....................................................................................................TAGCACCATTTGAAATCGGTTTTTTT...................................................... 26 3 3 5.67 17 0 0 0 0 17 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGA.......................................................... 23 1 2 5.50 11 3 0 0 6 1 1 0
.....................................................................................................TAGCACCATTTGAAATAAGTGTT......................................................... 23 1 2 5.50 11 8 0 0 1 2 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTATC......................................................... 24 2 2 5.50 11 0 8 3 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTG........................................................ 24 1 2 5.50 11 7 0 0 1 0 3 0
.....................................................................................................TAGCACCATTTGAAATCAGTGATT........................................................ 24 1 1 5.00 5 2 1 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGC.......................................................... 22 1 2 5.00 10 2 0 4 3 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTC....................................................... 25 1 1 5.00 5 0 4 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAA................................................................. 15 0 13 4.54 59 17 0 1 22 11 7 1
.....................................................................................................TAGCACCTTTTGAAATCAGTGTTATC...................................................... 26 3 2 4.50 9 0 8 1 0 0 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTTATC...................................................... 26 3 2 4.50 9 0 6 3 0 0 0 0
.....................................................................................................TCGCACCATTTGAAATCAGTGTTATC...................................................... 26 3 2 4.50 9 0 5 4 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTATC..................................................... 27 3 2 4.50 9 0 7 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGAGTT......................................................... 23 1 2 4.50 9 4 0 0 4 0 1 0
.....................................................................................................TAGCACCATTTGGAATCAGTGTTATC...................................................... 26 3 3 4.33 13 0 8 5 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATC............................................................... 17 0 3 4.33 13 1 0 0 6 4 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTT........................................................... 21 1 3 4.33 13 8 0 0 2 2 1 0
.....................................................................................................TAGCACCATTTTAAATCATTGTT......................................................... 23 2 2 4.00 8 3 0 0 0 3 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTC......................................................... 23 1 2 4.00 8 4 1 0 2 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTT......................................................... 23 1 2 4.00 8 4 0 0 1 2 1 0
.....................................................................................................TAGCACCATTCGAAATCAGTGTTATC...................................................... 26 3 2 4.00 8 0 7 1 0 0 0 0
.....................................................................................................TAGCACCATTTGCAATCAGTGTT......................................................... 23 1 2 3.50 7 4 0 0 1 1 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCT......................................................... 23 1 2 3.50 7 6 0 0 0 0 1 0
.....................................................................................................TAGCACCATTTGACATCAGTGTT......................................................... 23 1 2 3.50 7 5 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGT.......................................................... 22 1 2 3.50 7 7 0 0 0 0 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTT......................................................... 22 0 2 3.50 7 2 0 0 3 0 2 0
............................................................CTGGTTTCACATGGTGGCTTAGATATC.............................................................................................. 27 2 1 3.00 3 0 3 0 0 0 0 0
...................................................................................................AATAGCACCATTTGAAATCAGTGTTT........................................................ 26 2 1 3.00 3 2 0 0 1 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGATC................................................................................................ 26 1 1 3.00 3 0 3 0 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAA................................................................................................... 22 1 1 3.00 3 1 0 0 1 0 0 1
.....................................................................................................TAGCACCATTTGAAATCAGGGTT......................................................... 23 1 2 3.00 6 5 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTGAAA..................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGT......................................................... 23 1 2 3.00 6 3 0 0 3 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTACC...................................................... 26 3 2 3.00 6 0 4 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAA......................................................... 23 2 2 3.00 6 1 1 0 0 0 4 0
.............................................................TGGTTTCACATGGTGGCTTAGAT................................................................................................. 23 0 1 3.00 3 2 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTATC....................................................... 25 3 1 3.00 3 0 1 2 0 0 0 0
.....................................................................................................TAGCACCATCTGAAATCAGTGTT......................................................... 23 1 2 3.00 6 3 0 0 2 0 1 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTTATC...................................................... 26 3 3 3.00 9 0 7 2 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAA................................................................................................. 24 1 1 3.00 3 0 0 0 2 0 0 1
.....................................................................................................TACCACCATTTGAAATCAGTGTT......................................................... 23 1 2 3.00 6 4 0 0 0 0 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTATA....................................................... 25 2 1 3.00 3 0 2 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTATC....................................................... 25 3 2 3.00 6 0 6 0 0 0 0 0
.............................................................TGGTTTCACATGGTGGCTTAGAAATC.............................................................................................. 26 3 1 3.00 3 0 1 2 0 0 0 0
............................................................CTGGTTTCACATGGTTGCTTAGAATC............................................................................................... 26 3 1 3.00 3 0 3 0 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTA.................................................................................................... 22 0 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................TAGCACTATTTGAAATCAGTGTTATC...................................................... 26 3 2 3.00 6 0 5 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTTT........................................................ 24 1 1 3.00 3 1 0 0 0 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTG......................................................... 23 1 2 3.00 6 4 0 0 2 0 0 0
...................................................................................................AATAGCACCATTTGAAATCAGTGT.......................................................... 24 2 3 2.67 8 5 0 0 2 0 1 0
.......................................................................................................GCACCATTTGAAATCGGTTTTT........................................................ 22 2 3 2.67 8 2 0 0 4 2 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGT.......................................................... 22 1 2 2.50 5 2 0 0 1 1 1 0
...................................................................................................AATAGCACCATTTGAAATCAGTGTTA........................................................ 26 3 2 2.50 5 3 0 0 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGAGTTATC...................................................... 26 3 2 2.50 5 0 5 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCTGTGTTATC...................................................... 26 3 2 2.50 5 0 4 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTGTTATC...................................................... 26 3 2 2.50 5 0 3 2 0 0 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTATC...................................................... 26 3 2 2.50 5 0 3 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTTATC...................................................... 26 3 2 2.50 5 0 4 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTATCT..................................................... 27 3 2 2.50 5 0 3 2 0 0 0 0
.......................................................................................................GCACCATTTGAAATCAGTGTT......................................................... 21 0 2 2.50 5 3 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTA........................................................... 21 1 2 2.50 5 0 0 2 3 0 0 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGT.......................................................... 22 1 2 2.50 5 1 0 0 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAAT....................................................... 25 2 2 2.50 5 0 5 0 0 0 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTT......................................................... 23 1 2 2.50 5 5 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCCGTGTT......................................................... 23 1 2 2.50 5 4 0 0 1 0 0 0
.....................................................................................................CAGCACCATTTGAAATCAGTGTT......................................................... 23 1 2 2.50 5 4 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATTAGTGTTATC...................................................... 26 3 2 2.50 5 0 5 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGAATC......................................................... 23 3 11 2.36 26 0 21 5 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAC......................................................... 23 2 3 2.33 7 0 3 2 0 0 2 0
.....................................................................................................TAGCACCATTTGAAATCTGT............................................................ 20 1 3 2.33 7 5 0 0 0 0 2 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTTT........................................................ 25 1 1 2.00 2 1 0 0 0 1 0 0
.....................................................................................................TAGCACCATCTGAAATCGGTATTT........................................................ 24 3 2 2.00 4 0 0 0 1 3 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTT......................................................... 23 1 2 2.00 4 3 0 0 0 0 0 1
.....................................................................................................TAGCACCATTTTAAATCAGTTTT......................................................... 23 2 3 2.00 6 5 0 0 0 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAAT........................................................ 24 2 1 2.00 2 0 1 0 0 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAAA..................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTTA........................................................ 24 2 2 2.00 4 0 0 0 0 3 0 1
............................................................CTGGTTTCACATGGTGGCTTAGT.................................................................................................. 23 1 1 2.00 2 1 0 0 0 0 1 0
.............................................................TGGTTTCACATGGTGGCTTA.................................................................................................... 20 0 1 2.00 2 1 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTT........................................................ 24 1 1 2.00 2 1 0 0 1 0 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTT........................................................ 23 0 1 2.00 2 0 0 0 0 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAA...................................................... 26 1 1 2.00 2 1 0 0 0 1 0 0
.....................................................................................................TAGCACCATCTGAAATCAGTGTTATC...................................................... 26 3 2 2.00 4 0 3 1 0 0 0 0
.....................................................................................................TAGCACCATTTGGAATCAGTGTT......................................................... 23 1 2 2.00 4 4 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTT......................................................... 23 1 2 2.00 4 4 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTTATC...................................................... 26 3 2 2.00 4 0 3 1 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTT.................................................................................................... 21 1 2 2.00 4 3 0 0 0 0 1 0
.....................................................................................................TAGCGCCATTTGAAATCAGTGTTATC...................................................... 26 3 2 2.00 4 0 4 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTGT.......................................................... 22 1 2 2.00 4 1 0 0 2 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTTT........................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAACCAGTGTT......................................................... 23 1 2 2.00 4 4 0 0 0 0 0 0
.............................................................TGGTTTCACATGGTGGCTTAG................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAT................................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGTATC............................................................................................... 26 3 1 2.00 2 0 1 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTAT.......................................................... 22 1 2 2.00 4 0 0 2 0 1 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAA...................................................... 26 2 1 2.00 2 0 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTATC....................................................... 25 3 1 2.00 2 0 1 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAATTCAGTGTTATC...................................................... 26 3 2 2.00 4 0 4 0 0 0 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTTT........................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGTACCATTTGAAATCAGTGTT......................................................... 23 1 2 2.00 4 3 0 0 0 1 0 0
.....................................................................................................TAGCACTATTTGAAATCAGTGT.......................................................... 22 1 2 2.00 4 3 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTGGA..................................................... 27 3 1 2.00 2 1 0 0 0 0 1 0
.............................................................TGGTTTCACATGGTGGCTTAGATATC.............................................................................................. 26 2 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCATTG........................................................... 21 1 2 2.00 4 0 0 0 0 2 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCTATC...................................................... 26 3 3 2.00 6 0 4 2 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAG............................................................. 20 0 2 2.00 4 1 0 0 2 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAAA....................................................... 25 3 4 1.75 7 0 0 0 2 3 2 0
.....................................................................................................TAGCACCATTTGAAATCAGATC.......................................................... 22 3 20 1.70 34 0 0 34 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTATC....................................................... 25 3 3 1.67 5 0 5 0 0 0 0 0
.....................................................................................................TAGCACCATTTTAAATCAGTGTTA........................................................ 24 2 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTCTT......................................................... 23 1 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAC...................................................... 26 3 2 1.50 3 0 2 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAACCAGTGTTATC...................................................... 26 3 2 1.50 3 0 2 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTGTT......................................................... 23 1 2 1.50 3 2 0 0 0 0 1 0
.....................................................................................................TAGCACCATTCGAAATCAGTGT.......................................................... 22 1 2 1.50 3 2 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTGTC...................................................... 26 2 2 1.50 3 0 2 1 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGTT......................................................... 24 0 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCACTGTTATC...................................................... 26 3 2 1.50 3 0 3 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTA........................................................ 24 2 2 1.50 3 0 0 1 0 2 0 0
.....................................................................................................TAGCACCATTTGAAATCATTTTT......................................................... 23 2 4 1.50 6 4 0 0 0 1 1 0
.....................................................................................................TAGCACCATTTGAAATAAGTGTTATC...................................................... 26 3 2 1.50 3 0 2 1 0 0 0 0
.....................................................................................................TCGCACCATTTGAAATCAGTGTT......................................................... 23 1 2 1.50 3 1 0 0 1 1 0 0
.....................................................................................................TAGCATCATTTGAAATCAGTGT.......................................................... 22 1 2 1.50 3 1 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGA............................................................ 20 1 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGT.......................................................... 22 1 2 1.50 3 1 0 0 2 0 0 0
.....................................................................................................TAGCATCATTTGAAATCAGTGTT......................................................... 23 1 2 1.50 3 2 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATTAGTGTA......................................................... 23 2 2 1.50 3 0 0 0 1 1 1 0
.....................................................................................................CAGCACCATTTGAAATCAGTGT.......................................................... 22 1 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGG.......................................................... 22 1 2 1.50 3 1 0 0 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTA......................................................... 23 2 2 1.50 3 1 0 0 0 1 1 0
.....................................................................................................TAGCACCATTTGAAATCACTGTT......................................................... 23 1 2 1.50 3 2 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTG........................................................... 21 1 2 1.50 3 1 0 0 0 1 1 0
.....................................................................................................TAGCCCCATTTGAAATCAGTGTT......................................................... 23 1 2 1.50 3 2 0 0 0 1 0 0
.....................................................................................................TAGCAGCATTTGAAATCAGTGTTATC...................................................... 26 3 3 1.33 4 0 3 1 0 0 0 0
.....................................................................................................TAGCATCATTTGAAATCAGTGTTATC...................................................... 26 3 3 1.33 4 0 2 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTCTC......................................................... 23 3 4 1.25 5 0 3 2 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTA......................................................... 23 2 4 1.25 5 3 0 0 0 1 0 1
......................................................................................................AGCACCATTTGAAATCAGTGTAATC...................................................... 25 3 4 1.25 5 0 2 3 0 0 0 0
.....................................................................................................TAGCACCATCTGAAATCAGTTT.......................................................... 22 2 6 1.17 7 1 0 0 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTGG...................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTAGTGT.................................................. 30 3 1 1.00 1 1 0 0 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGATA................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TACCACCATTTGAAATCAGTGT.......................................................... 22 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAGTCAGTGT.......................................................... 22 1 2 1.00 2 1 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTAC.......................................................... 22 2 2 1.00 2 0 1 1 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGAATT............................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................TAGCACCATTCGAAATCAGTGTT......................................................... 23 1 2 1.00 2 1 0 0 1 0 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAAA................................................................................................ 25 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAAACAGTGTT......................................................... 23 1 2 1.00 2 1 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTACG..................................................... 27 2 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................CTAGCACCATTTGAAATCATTGTATC....................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................AACTAGCACCATTTGAAATCAGTGTT......................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
............................................................CTGGCTTCACATGGTGGCTTAG................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CAGCACCATTTGAAATCAGTGTTATC...................................................... 26 3 2 1.00 2 0 1 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAAGA.................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTTAAATCAGTGTTT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................TGGTTTCACATGGTGGCTTAGAG................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGATATC.............................................................................................. 28 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTATTCGG.................................................... 28 2 1 1.00 1 0 0 0 1 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTT..................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGTT........................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTATA.................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................ACCATTTGAAATCAGTGTTT........................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................GAGCACCATTTGAAATCAGTGTT......................................................... 23 1 2 1.00 2 1 0 0 1 0 0 0
.....................................................................................................TAGCACCACTTGAAATCAGTGTT......................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATCTGAAATCGGTGT.......................................................... 22 2 3 1.00 3 3 0 0 0 0 0 0
...........................................................GCCGGTTTCACATGGTGGCTT..................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGACTC....................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTCAAA..................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAGG..................................................... 27 2 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................TAGCACCATTTGGAATCAGTGTATC....................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCGTTTGAAATCAGTGTTATC...................................................... 26 3 2 1.00 2 0 2 0 0 0 0 0
.............................................................TGGTTACACATGGTGGCTTAGA.................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 1
.............................................................TGGTTTCACATGCTGGCTTAGAATC............................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................GCACCATTTGCAATCAGTGTTATC...................................................... 24 3 2 1.00 2 0 1 1 0 0 0 0
.............................................................TGGTTTCACATGGTGGCTTAT................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TAGCACCGTTTGAAATCAGTGT.......................................................... 22 1 2 1.00 2 2 0 0 0 0 0 0
............................................................CTGGTTTCACATGTTTGCTTAG................................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................TAGCACCATTTGAAGTCAGTGTT......................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTT...................................................... 26 1 2 1.00 2 0 0 1 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTCGGG.................................................... 28 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TAGCACCATTTGAAGTCAGTGTTATC...................................................... 26 3 3 1.00 3 0 2 1 0 0 0 0
............................................................GTGGTTTCACATGGTGGCTTAGAATC............................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................TAACACCATTTGAAATCAGTGTTT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGAA................................................................................................. 25 1 1 1.00 1 0 0 0 0 0 1 0
............................................................CTGGCTTCACATGGTGGCTTAGAATC............................................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................CTAGCACCATTTGAAAT................................................................ 17 0 3 1.00 3 0 0 0 1 0 2 0
.....................................................................................................TAGCACCATTTTAAATCAGTGATT........................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTA......................................................... 22 1 2 1.00 2 0 0 0 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTCCGA.................................................... 28 3 1 1.00 1 0 0 0 0 1 0 0
...........................................................GCTGGTTTCACATGGTGGCTAA.................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
............................................................CTGGTTTCACATGGTGGCTTATT.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTT......................................................... 23 1 2 1.00 2 0 0 0 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCGGTGTATC....................................................... 25 3 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGT.......................................................... 22 1 2 1.00 2 1 0 0 0 1 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTATC....................................................... 25 3 2 1.00 2 0 0 2 0 0 0 0
.............................................................TGGTTTCACATGGTTGCTTAGAATC............................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTCTC......................................................... 23 2 3 1.00 3 0 2 1 0 0 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTTATC...................................................... 27 3 2 1.00 2 0 2 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTGATC.................................................... 28 3 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCTGTTTTT........................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0
.............................................................TGGTTTCACATGGTGGCTTAGATC................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAATGTTATC...................................................... 26 3 2 1.00 2 0 1 1 0 0 0 0
.......................................................................................................GCACCATTTGAAATCGGTTTTTT....................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TGGCACCATTTGAAATCAGTGTTT........................................................ 24 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................CTACCACCATTTGAAATCAGTGTATC....................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGTATC...................................................... 26 3 3 1.00 3 0 2 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTTATA...................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTTA........................................................ 24 2 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................................TAACACCATTTGAAATCAGTGTT......................................................... 23 1 2 1.00 2 1 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTAA.......................................................... 22 2 4 1.00 4 1 0 0 2 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAATGT.......................................................... 22 1 2 1.00 2 2 0 0 0 0 0 0
............................................................CTGGTTTCACATGGTGTCTTAGATC................................................................................................ 25 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGT.......................................................... 22 1 2 1.00 2 1 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTATTATC...................................................... 26 3 2 1.00 2 0 2 0 0 0 0 0
.....................................................................................................TAGCCCCATTTGAAATCAGTGT.......................................................... 22 1 2 1.00 2 1 0 0 1 0 0 0
.....................................................................................................TAGCACCATTCGAAATCAGTGTATC....................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................TAGCACCATTTTAAATCAGTGA.......................................................... 22 2 2 1.00 2 0 0 0 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTAGTA................................................... 29 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................TAGCACCATTTGCAATCAGTGTTATA...................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTTT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAT................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................TAGCATCATTTGAAATCAGTGTTT........................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TAGCACCATTTTAAATCAGT............................................................ 20 1 2 1.00 2 2 0 0 0 0 0 0
............................................................CTGGTTTCACATGGTGGCTTATA.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................GCTGGTTTCACATGGTTGCTTAA................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGTATC....................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................AACTAGCACCATTTGAAATC............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0

Anti-sense strand reads

CCGACCCAGAAGGCTAACTTAGAGGGAAGAAAGAAGTAACTCTAGGAGAAGAAGACCTTCGACCAAAGTGTACCACCGAATCTAAAAAGGTAGAAACATAGATCGTGGTAAACTTTAGTCACAAAATCCTCATTCTTAACGTCGTGTCGGTTCCCACCTGACGTCTCCTTGACGACGAGTA

******************************************.(((((((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))))))).))))...********************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
.....CGAGAAGGCTAGCTTAG............................................................................................................................................................... 17 2 20 0.05 1 1

Generated: 09/01/2015 at 12:05 PM