ID:

mml-mir-29b-1

 Coordinate:

chr3:169845531-169845611 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.8 -38.8 -38.5
mature

  1. mml-mir-29b-2  chr1:163153344-163153366 +
  2. mml-mir-29b-1  chr3:169845539-169845561 -
star

Sense Strand Reads

GGGTTTATGGTAAGAGAGCATTATGAAGAAAAAAATAGATCCTAAAGCTTCTTCAGGAAGCTGGTTTCATATGGTGGTTTAGATTTAAATAGTGATTGTCTAGCACCATTTGAAATCAGTGTTCTTGGGGGAGACCAGCTGCGCCGCACTGCCAACAGCAAAAGAAATGAGTGGGACAGCT

********************************************...((((((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).)))))))))))).....******************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116843

cortex		 SRR116844

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116840

epididymis		 SRR116839

testes
....................................................................................................TAGCACCATTTGAAATCAGTGTT.......................................................... 23 0 2 4562.00 9124 1 6211 0 1218 965 682 47
....................................................................................................TAGCACCATTTGAAATCAGTGTTATC....................................................... 26 2 2 4334.50 8669 5518 0 3151 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGATC......................................................... 24 1 1 1811.00 1811 1346 0 465 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGT........................................................... 22 0 2 1389.50 2779 0 1692 1 448 318 307 13
....................................................................................................TAGCACCATTTGAAATCAGTGTA.......................................................... 23 1 2 237.00 474 0 189 1 164 57 60 3
....................................................................................................TAGCACCATTTGAAATCAGTG............................................................ 21 0 2 167.00 334 2 103 0 92 26 109 2
......................................................................................................GCACCATTTGAAATCAGTGTTATC....................................................... 24 2 2 158.00 316 183 0 133 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTATT....................................................... 26 1 1 148.00 148 75 0 73 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTA......................................................... 24 1 2 143.00 286 13 197 16 24 25 9 2
....................................................................................................TAGCACCATTTGAAATCAGTGTAATC....................................................... 26 3 2 131.50 263 204 0 59 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGATC......................................................... 25 1 1 117.00 117 78 0 39 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTATC.......................................................... 23 3 5 98.60 493 350 0 143 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTATC.......................................................... 23 2 2 75.00 150 102 0 48 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGA........................................................... 22 1 2 61.50 123 14 20 4 40 10 34 1
..................................................................................................AATAGCACCATTTGAAATCAGTGTT.......................................................... 25 2 2 47.50 95 0 61 0 16 10 7 1
....................................................................................................TAGCACCATTTGAAATCAGT............................................................. 20 0 2 44.50 89 0 41 0 17 10 21 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTAATC...................................................... 27 3 1 44.00 44 33 0 11 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATTGTT.......................................................... 23 1 2 42.00 84 0 57 0 0 13 11 3
....................................................................................................TAGCACCATTTGAAATCAGTTTT.......................................................... 23 1 2 35.00 70 0 56 0 0 6 7 1
....................................................................................................TAGCACCATTTTAAATCAGTGTT.......................................................... 23 1 2 29.50 59 0 52 0 0 5 2 0
....................................................................................................TAGCACCATTTGAAATCAGTGTAA......................................................... 24 2 2 26.00 52 2 25 1 13 6 5 0
....................................................................................................TAGCACCATTTGAAATCAG.............................................................. 19 0 2 24.50 49 0 27 0 8 9 5 0
....................................................................................................TAGCACCATTTGAAATCATTGTTATC....................................................... 26 3 2 24.00 48 37 0 11 0 0 0 0
....................................................................................................TAGCACCATTTGAACTCAGTGTTATC....................................................... 26 3 2 24.00 48 30 0 18 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTTT........................................................... 22 1 2 21.50 43 0 29 0 1 8 5 0
....................................................................................................TAGCACCCTTTGAAATCAGTGTTATC....................................................... 26 3 2 19.50 39 22 0 17 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTG............................................................ 22 0 2 18.00 36 0 11 0 14 5 6 0
....................................................................................................TAGCACCATTTGAAATCGGTAT........................................................... 22 2 4 18.00 72 0 8 1 30 19 14 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTAA........................................................ 25 2 2 17.50 35 0 27 0 1 6 1 0
....................................................................................................TAGCACCATTTGAAATCAGTTTTATC....................................................... 26 3 3 15.00 45 30 0 15 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTCTC....................................................... 26 1 1 15.00 15 6 0 9 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGT........................................................... 23 0 2 14.50 29 0 13 0 3 9 4 0
....................................................................................................TAGCACCATTTGAACTCAGTGATC......................................................... 24 2 1 14.00 14 8 0 6 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGAT.......................................................... 23 1 2 14.00 28 13 10 2 0 1 2 0
....................................................................................................TAGCACCATTTGAAATCTGTTT........................................................... 22 2 5 13.40 67 0 6 0 0 49 12 0
....................................................................................................TAGCACCATTTGAAATCATTGT........................................................... 22 1 2 13.00 26 0 22 0 1 1 2 0
....................................................................................................TAGCACCATTTTAAATCAGTGTTATC....................................................... 26 3 2 12.50 25 10 0 15 0 0 0 0
....................................................................................................TAGCACCATTTGACATCAGTGTTATC....................................................... 26 3 3 11.67 35 24 0 11 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGGGTTATC....................................................... 26 3 2 11.50 23 8 0 15 0 0 0 0
....................................................................................................TATCACCATTTGAAATCAGTGATC......................................................... 24 2 1 11.00 11 9 0 2 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGT............................................................. 21 0 2 11.00 22 0 7 0 4 5 6 0
....................................................................................................TAGCACCCTTTGAAATCAGTGATC......................................................... 24 2 1 11.00 11 9 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCCGTGTTATC....................................................... 26 3 2 10.50 21 12 0 9 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTAT........................................................ 25 1 2 10.00 20 16 0 3 0 1 0 0
....................................................................................................TAGCACCATTTGACATCAGTGATC......................................................... 24 2 1 10.00 10 9 0 1 0 0 0 0
....................................................................................................TAGCACCATTTCAAATCAGTGTT.......................................................... 23 1 2 10.00 20 0 17 0 2 0 1 0
.....................................................................................................AGCACCATTTGAAATCAGTGTTATC....................................................... 25 2 2 9.50 19 9 0 10 0 0 0 0
...................................................................................................ATAGCACCATTTGAAATCAGTGTT.......................................................... 24 1 2 9.50 19 0 15 0 1 2 1 0
....................................................................................................TAGCACCATTTTAAATCAGTGT........................................................... 22 1 2 9.50 19 0 10 0 0 4 4 1
....................................................................................................TAGCACCATTTGAAAT................................................................. 16 0 6 9.33 56 0 3 0 28 13 12 0
....................................................................................................TAGCACCATTTGAAATCAGTGTCATC....................................................... 26 3 2 9.00 18 12 0 6 0 0 0 0
....................................................................................................TAGCCCCATTTGAAATCAGTGTTATC....................................................... 26 3 3 8.00 24 14 0 10 0 0 0 0
....................................................................................................TAGCACCCTTTGAAATCAGTGTT.......................................................... 23 1 2 7.50 15 0 11 0 3 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGCTC......................................................... 24 1 1 7.00 7 1 0 6 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCA............................................................... 18 0 2 7.00 14 0 2 0 5 4 3 0
....................................................................................................TAGCCCCATTTGAAATCAGTGATC......................................................... 24 2 1 7.00 7 5 0 2 0 0 0 0
....................................................................................................TAGCACCATTTCAAATCAGTGTTATC....................................................... 26 3 2 7.00 14 13 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGCAATCAGTGTTATC....................................................... 26 3 2 7.00 14 9 0 5 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGGGATC......................................................... 24 2 1 6.00 6 3 0 3 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTGATC...................................................... 27 3 1 6.00 6 5 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGCA.......................................................... 23 2 2 6.00 12 0 1 0 8 2 1 0
....................................................................................................TAGCACCATTTGAAATCGGTTTTTTT....................................................... 26 3 3 5.67 17 0 0 0 0 17 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGA........................................................... 23 1 2 5.50 11 0 3 0 6 1 1 0
....................................................................................................TAGCACCATTTGAAATAAGTGTT.......................................................... 23 1 2 5.50 11 0 8 0 1 2 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTATC.......................................................... 24 2 2 5.50 11 8 0 3 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTG......................................................... 24 1 2 5.50 11 0 7 0 1 0 3 0
....................................................................................................TAGCACCATTTGAAATCAGTGACC......................................................... 24 2 1 5.00 5 4 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGC........................................................... 22 1 2 5.00 10 0 2 4 3 1 0 0
....................................................................................................TAGCACCATTTGAAA.................................................................. 15 0 13 4.54 59 0 17 1 22 11 7 1
....................................................................................................TATCACCATTTGAAATCAGTGTTATC....................................................... 26 3 2 4.50 9 6 0 3 0 0 0 0
....................................................................................................TCGCACCATTTGAAATCAGTGTTATC....................................................... 26 3 2 4.50 9 5 0 4 0 0 0 0
....................................................................................................TAGCACCTTTTGAAATCAGTGTTATC....................................................... 26 3 2 4.50 9 8 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTTATC...................................................... 27 3 2 4.50 9 7 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGAGTT.......................................................... 23 1 2 4.50 9 0 4 0 4 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTT............................................................ 21 1 3 4.33 13 0 8 0 2 2 1 0
....................................................................................................TAGCACCATTTGGAATCAGTGTTATC....................................................... 26 3 3 4.33 13 8 0 5 0 0 0 0
....................................................................................................TAGCACCATTTGAAATC................................................................ 17 0 3 4.33 13 0 1 0 6 4 2 0
....................................................................................................TAGCACCATTTGAAATCAGATC........................................................... 22 3 20 4.10 82 48 0 34 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTC.......................................................... 23 1 2 4.00 8 1 4 0 2 0 1 0
....................................................................................................TAGCACCATTTGAAATCCGTGATC......................................................... 24 2 1 4.00 4 3 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTC......................................................... 24 0 1 4.00 4 2 0 2 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCATTGTT.......................................................... 23 2 2 4.00 8 0 3 0 0 3 2 0
....................................................................................................TAGCACCATTTGAAATCATTGATC......................................................... 24 2 1 4.00 4 4 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGCGTT.......................................................... 23 1 2 4.00 8 0 4 0 1 2 1 0
....................................................................................................TAGCACCATTCGAAATCAGTGTTATC....................................................... 26 3 2 4.00 8 7 0 1 0 0 0 0
.....................................................................................................AGCACCATTTGAAATCAGTGTT.......................................................... 22 0 2 3.50 7 0 2 0 3 0 2 0
....................................................................................................TAGCACCATTTGCAATCAGTGTT.......................................................... 23 1 2 3.50 7 0 4 0 1 1 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGCT.......................................................... 23 1 2 3.50 7 0 6 0 0 0 1 0
....................................................................................................TAGCACCATTTCAAATCAGTGT........................................................... 22 1 2 3.50 7 0 7 0 0 0 0 0
....................................................................................................TAGCACCATTTGACATCAGTGTT.......................................................... 23 1 2 3.50 7 0 5 0 1 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGGGTT.......................................................... 23 1 2 3.00 6 0 5 0 1 0 0 0
....................................................................................................TAGCACTATTTGAAATCAGTGTTATC....................................................... 26 3 2 3.00 6 5 0 1 0 0 0 0
....................................................................................................TAGCACCATTTAAAATCAGTGTTATC....................................................... 26 3 3 3.00 9 7 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTAC......................................................... 24 1 1 3.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGCAATCAGTGATC......................................................... 24 2 1 3.00 3 1 0 2 0 0 0 0
....................................................................................................TAGCACCATCTGAAATCAGTGTT.......................................................... 23 1 2 3.00 6 0 3 0 2 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGAA.......................................................... 23 2 2 3.00 6 1 1 0 0 0 4 0
....................................................................................................TAGCACCATTTGAAATCAGTGGT.......................................................... 23 1 2 3.00 6 0 3 0 3 0 0 0
....................................................................................................TACCACCATTTGAAATCAGTGTT.......................................................... 23 1 2 3.00 6 0 4 0 0 0 2 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTACC....................................................... 26 3 2 3.00 6 4 0 2 0 0 0 0
....................................................................................................TAGCACCATTTCAAATCAGTGATC......................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGGAATCAGTGATC......................................................... 24 2 1 3.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTACTC....................................................... 26 2 1 3.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTG.......................................................... 23 1 2 3.00 6 0 4 0 2 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTAATC......................................................... 24 2 1 3.00 3 1 0 2 0 0 0 0
..................................................................................................AATAGCACCATTTGAAATCAGTGT........................................................... 24 2 3 2.67 8 0 5 0 2 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTATCT...................................................... 27 3 2 2.50 5 3 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTGTTATC....................................................... 26 3 2 2.50 5 3 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCTGTGTTATC....................................................... 26 3 2 2.50 5 4 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGAGTTATC....................................................... 26 3 2 2.50 5 5 0 0 0 0 0 0
..................................................................................................AATAGCACCATTTGAAATCAGTGTTA......................................................... 26 3 2 2.50 5 0 3 0 1 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTA............................................................ 21 1 2 2.50 5 0 0 2 3 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTAAT........................................................ 25 2 2 2.50 5 5 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATTAGTGTTATC....................................................... 26 3 2 2.50 5 5 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAGATCAGTGTTATC....................................................... 26 3 2 2.50 5 4 0 1 0 0 0 0
......................................................................................................GCACCATTTGAAATCAGTGTT.......................................................... 21 0 2 2.50 5 0 3 0 1 1 0 0
....................................................................................................TAGCACCATTTAAAATCAGTGTT.......................................................... 23 1 2 2.50 5 0 5 0 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTTATC......................................................... 25 2 2 2.50 5 4 0 1 0 0 0 0
....................................................................................................TAGCACCCTTTGAAATCAGTGT........................................................... 22 1 2 2.50 5 0 1 0 2 2 0 0
....................................................................................................TAGCACCATTTGAAATAAGTGT........................................................... 22 1 2 2.50 5 0 2 0 1 1 1 0
....................................................................................................TAGCACCATTTGAAATCCGTGTT.......................................................... 23 1 2 2.50 5 0 4 0 1 0 0 0
....................................................................................................CAGCACCATTTGAAATCAGTGTT.......................................................... 23 1 2 2.50 5 0 4 0 1 0 0 0
....................................................................................................TAGCACCATTTGATATCAGTGTTATC....................................................... 26 3 2 2.50 5 3 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGAATC.......................................................... 23 3 11 2.36 26 21 0 5 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGAC.......................................................... 23 2 3 2.33 7 3 0 2 0 0 2 0
....................................................................................................TAGCACCATTTGAAATCTGT............................................................. 20 1 3 2.33 7 0 5 0 0 0 2 0
....................................................................................................TACCACCATTTGAAATCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAACACCATTTGAAATCAGTGATC......................................................... 24 2 1 2.00 2 0 0 2 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTTTT.......................................................... 23 2 3 2.00 6 0 5 0 0 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGCTATC....................................................... 26 3 3 2.00 6 4 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGGAATCAGTGTT.......................................................... 23 1 2 2.00 4 0 4 0 0 0 0 0
....................................................................................................TAGCACCATTTGAGATCAGTGTT.......................................................... 23 1 2 2.00 4 0 4 0 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAG.............................................................. 20 0 2 2.00 4 0 1 0 2 0 1 0
...........................................................GCTGGTTTCATATGGTGGTTTAGA.................................................................................................. 24 0 1 2.00 2 0 1 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAACCAGTGTT.......................................................... 23 1 2 2.00 4 0 4 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTAT........................................................... 22 1 2 2.00 4 0 0 2 0 1 1 0
....................................................................................................TAGCGCCATTTGAAATCAGTGTTATC....................................................... 26 3 2 2.00 4 4 0 0 0 0 0 0
...........................................................GCTGGTTTCATATGGTGTTTTAGAATC............................................................................................... 27 3 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATTGTTA......................................................... 24 2 2 2.00 4 0 0 0 0 3 0 1
....................................................................................................TATCACCATTTGAAATCAGTGTT.......................................................... 23 1 2 2.00 4 0 3 0 0 0 0 1
....................................................................................................TAGCCCCATTTGAAATCAGTGTTCTC....................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGCGATC......................................................... 24 2 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTGT........................................................... 22 1 2 2.00 4 0 1 0 2 0 1 0
....................................................................................................TAGCATCATTTGAAATCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATCTGAAATCAGTGTTATC....................................................... 26 3 2 2.00 4 3 0 1 0 0 0 0
....................................................................................................TAGCACTATTTGAAATCAGTGATC......................................................... 24 2 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTGTTATT....................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAGATCAGTGATC......................................................... 24 2 1 2.00 2 1 0 1 0 0 0 0
...........................................................GCTGGTTTCATATTGTGGTTTAGAATC............................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATAAGTGATC......................................................... 24 2 1 2.00 2 0 0 2 0 0 0 0
....................................................................................................TAGCAGCATTTGAAATCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAATTCAGTGTTATC....................................................... 26 3 2 2.00 4 4 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAATGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
...........................................................GCTGGTTTCATATGGTCGTTTAGAATC............................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGTACCATTTGAAATCAGTGTT.......................................................... 23 1 2 2.00 4 0 3 0 0 1 0 0
....................................................................................................TAGCACCCTTTGAAATCAGTGTTCTC....................................................... 26 2 1 2.00 2 0 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAGTCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTCGAAATCAGTGATC......................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATTG............................................................ 21 1 2 2.00 4 0 0 0 0 2 2 0
....................................................................................................TAGCACCATTTGAAATCAGTTTTATT....................................................... 26 2 1 2.00 2 0 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGCGTTATC....................................................... 26 3 2 2.00 4 3 0 1 0 0 0 0
....................................................................................................TAGCACTATTTGAAATCAGTGT........................................................... 22 1 2 2.00 4 0 3 0 0 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTAAA........................................................ 25 3 4 1.75 7 0 0 0 2 3 2 0
....................................................................................................TAGCACCATTTGAAATCAGTCTT.......................................................... 23 1 2 1.50 3 0 3 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCACTGTTATC....................................................... 26 3 2 1.50 3 3 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAGATCAGTGT........................................................... 22 1 2 1.50 3 0 1 0 2 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGG........................................................... 22 1 2 1.50 3 0 1 0 1 0 1 0
....................................................................................................CAGCACCATTTGAAATCAGTGT........................................................... 22 1 2 1.50 3 0 3 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATAAGTGTTATC....................................................... 26 3 2 1.50 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTGTT.......................................................... 23 1 2 1.50 3 0 2 0 0 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGGGTTA......................................................... 24 2 2 1.50 3 0 0 1 0 2 0 0
....................................................................................................TAGCACCATTCGAAATCAGTGT........................................................... 22 1 2 1.50 3 0 2 0 1 0 0 0
....................................................................................................TAGCATCATTTGAAATCAGTGT........................................................... 22 1 2 1.50 3 0 1 0 1 1 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGTT.......................................................... 24 0 2 1.50 3 0 3 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATTTTT.......................................................... 23 2 4 1.50 6 0 4 0 0 1 1 0
....................................................................................................TAGCACCATTTCAAATCAGTG............................................................ 21 1 2 1.50 3 0 1 0 0 1 1 0
....................................................................................................TCGCACCATTTGAAATCAGTGTT.......................................................... 23 1 2 1.50 3 0 1 0 1 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGTTATC......................................................... 24 2 2 1.50 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTAAC....................................................... 26 3 2 1.50 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTGTTA......................................................... 24 2 2 1.50 3 0 3 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAACCAGTGTTATC....................................................... 26 3 2 1.50 3 2 0 1 0 0 0 0
....................................................................................................TAGCATCATTTGAAATCAGTGTT.......................................................... 23 1 2 1.50 3 0 2 0 0 1 0 0
....................................................................................................TAGCACCATTTGAAATCACTGTT.......................................................... 23 1 2 1.50 3 0 2 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTTTA.......................................................... 23 2 2 1.50 3 0 1 0 0 1 1 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTGTC....................................................... 26 2 2 1.50 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATTAGTGTA.......................................................... 23 2 2 1.50 3 0 0 0 1 1 1 0
....................................................................................................TAGCCCCATTTGAAATCAGTGTT.......................................................... 23 1 2 1.50 3 0 2 0 0 1 0 0
....................................................................................................TAGTACCATTTGAAATCAGTGATC......................................................... 24 2 2 1.50 3 1 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGA............................................................. 20 1 2 1.50 3 0 3 0 0 0 0 0
....................................................................................................TAGCATCATTTGAAATCAGTGTTATC....................................................... 26 3 3 1.33 4 2 0 2 0 0 0 0
....................................................................................................TAGCAGCATTTGAAATCAGTGTTATC....................................................... 26 3 3 1.33 4 3 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTCTC.......................................................... 23 3 4 1.25 5 3 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATTGTA.......................................................... 23 2 4 1.25 5 0 3 0 0 1 0 1
.....................................................................................................AGCACCATTTGAAATCAGTGTAATC....................................................... 25 3 4 1.25 5 2 0 3 0 0 0 0
....................................................................................................TAGCACCATCTGAAATCAGTTT........................................................... 22 2 6 1.17 7 0 1 0 3 3 0 0
....................................................................................................TAGCACCATTTGAAAACAGTGTT.......................................................... 23 1 2 1.00 2 0 1 0 0 1 0 0
....................................................................................................TAGCACCATTTGATATCAGTGT........................................................... 22 1 2 1.00 2 0 1 0 0 1 0 0
...................................................................................................CTAGCACCATTTGACATCAGTGATC......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTAA........................................................... 22 2 4 1.00 4 0 1 0 2 0 1 0
...........................................................GCTGGTTTCATATGGTGGTTTATA.................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TAGTACCATTTGAAATCAGTGT........................................................... 22 1 2 1.00 2 0 1 0 0 0 0 1
...........................................................GCTGGTTTCATATGGTGGTTTA.................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TAGGACCATTTGAAATCAGTGATC......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................GTAGCACCATTTGAAATCAGTGATC......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................CTATCACCATTTGAAATCAGTGATC......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCCTTTGAAATCCGTGATC......................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAATGT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0 0
.................................................................................................GGTTAGCACCATTTGAAATCAGTGTT.......................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGATCC........................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATCTGAAATCGGTGT........................................................... 22 2 3 1.00 3 0 3 0 0 0 0 0
....................................................................................................TAGCACCACTTGAAATCAGTGTT.......................................................... 23 1 2 1.00 2 0 2 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATTAGTGTTATT....................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................GAGCACCATTTGAAATCAGTGTT.......................................................... 23 1 2 1.00 2 0 1 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTACTC......................................................... 24 3 2 1.00 2 0 0 2 0 0 0 0
.....................................................................................................AGCACCATTTGAAATCAGTGTA.......................................................... 22 1 2 1.00 2 0 0 0 1 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGTATTATC....................................................... 26 3 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTCAAATCAGTGTTA......................................................... 24 2 2 1.00 2 0 2 0 0 0 0 0
....................................................................................................CAGCACCATTTGAAATCAGTGATC......................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGGTC......................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAACTCAGTGTTATT....................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAGTCAGTGTT.......................................................... 23 1 2 1.00 2 0 2 0 0 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGCTC......................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTAAAATCAGTGATC......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................AGCACCATTTGAAATCAGTGTTAATC...................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATCTGAAATCGGTATTC......................................................... 24 3 3 1.00 3 3 0 0 0 0 0 0
....................................................................................................TAGCACCGTTTGAAATCAGTGT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0 0
....................................................................................................TAGCACCATTCGAAATCAGTGTT.......................................................... 23 1 2 1.00 2 0 1 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAATTAGTGATC......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTAC........................................................... 22 2 2 1.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTAACTGG..................................................... 28 3 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................CTAGCCCCATTTGAAATCAGTGATC......................................................... 25 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGT............................................................. 20 1 2 1.00 2 0 2 0 0 0 0 0
......................................................................................................GCACCATTTGCAATCAGTGTTATC....................................................... 24 3 2 1.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAACTCAGTGT........................................................... 22 1 2 1.00 2 0 0 0 1 0 1 0
....................................................................................................TACCACCATTTGAAATCAGTGTTATC....................................................... 26 3 2 1.00 2 0 0 2 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTTTT....................................................... 26 1 2 1.00 2 0 0 1 0 1 0 0
......................................................................................................GCACCATTTGAAATCAGTGTTCTC....................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................ATAGCACCATTTGAAATCAGTGTTATC....................................................... 27 3 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TCGCACCATTTGAAATCAGTGATC......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTCAAA...................................................... 27 3 2 1.00 2 0 2 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCATT............................................................. 20 1 2 1.00 2 0 0 0 0 1 1 0
....................................................................................................TAGCACCATCTGAAATCAGTGATC......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................AGCACCATTTGAAATCAGTGTACTC....................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TCGCACCATTTGAAATCAGTGTTCTC....................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TGGCACCATTTGAAATCAGTGTTATC....................................................... 26 3 2 1.00 2 1 0 1 0 0 0 0
......................................................................................................GCACCATTTGAAATCAGTGT........................................................... 20 0 2 1.00 2 0 1 0 0 1 0 0
....................................................................................................TAACACCATTTGAAATCAGTGTT.......................................................... 23 1 2 1.00 2 0 1 0 0 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGTCTC.......................................................... 23 2 3 1.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCCCCATTTGAAATCAGTGT........................................................... 22 1 2 1.00 2 0 1 0 1 0 0 0
....................................................................................................TAGCACCATTTGAACTCAGTGTT.......................................................... 23 1 2 1.00 2 0 0 0 1 0 1 0
.....................................................................................................AGCACCATTTGAAATCAGTGTTCTC....................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTTCGGG...................................................... 27 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................TACCACCATTTGAAATCAGTGT........................................................... 22 1 2 1.00 2 0 2 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAACCAGTGTTATT....................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGCAATCAGTGTTATT....................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGTAATCAGTGATC......................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTGA........................................................... 22 2 2 1.00 2 0 0 0 1 0 1 0
....................................................................................................TAGCACCATTTGACATCAGTGT........................................................... 22 1 2 1.00 2 0 1 0 0 1 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGGTATC....................................................... 26 3 3 1.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTGTACC........................................................ 25 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................CAGCACCATTTGAAATCAGTGTTATC....................................................... 26 3 2 1.00 2 1 0 1 0 0 0 0
...................................................................................................CTAGCACCATATGAAATCAGTGATC......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAGTCAGTGTTATC....................................................... 26 3 3 1.00 3 2 0 1 0 0 0 0
....................................................................................................TAGCACCATTTAAAATCAGTGT........................................................... 22 1 3 1.00 3 0 2 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAGTCAGTGT........................................................... 22 1 2 1.00 2 0 1 0 1 0 0 0
....................................................................................................TAGCACCATTTGAAATCAGTTTTA......................................................... 24 2 2 1.00 2 1 0 0 0 0 1 0
....................................................................................................TAGCACCATTTGAAATCAATGTTATC....................................................... 26 3 2 1.00 2 1 0 1 0 0 0 0
................................................................................................AGAGTAGCACCATTTGAAATCAGTG............................................................ 25 3 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TAGCACCAGTTGAAATCAGTGTT.......................................................... 23 1 2 1.00 2 0 1 0 1 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTAATC......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TAGCACCCTTTGAAATCAGTGTTATT....................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................GAGTAGCACCATTTGAAATCAGTGTT.......................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................CTAGCACCATTTGAAATCAGATC........................................................... 23 3 6 1.00 6 0 0 6 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCCGTGTTCTC....................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................AGCACCATTTGAAATCAGTGATC......................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................CTAGCACCATTTGAAAT................................................................. 17 0 3 1.00 3 0 0 0 1 0 2 0
....................................................................................................TAGCACCATTTGAAATCCGTGTTATT....................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................................CACCATTTGAAATCAGTGATC......................................................... 21 1 2 1.00 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCGTTTGAAATCAGTGTTATC....................................................... 26 3 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTATT.......................................................... 23 2 4 0.75 3 0 1 0 0 2 0 0
....................................................................................................TAGCACCATTTGAAATCTGTTTT.......................................................... 23 2 4 0.75 3 0 0 0 0 3 0 0
....................................................................................................TAGTACCATTTGAAATCAGTGTTATC....................................................... 26 3 3 0.67 2 1 0 1 0 0 0 0
....................................................................................................TAGCACCATTTGAAATAAGTGTA.......................................................... 23 2 3 0.67 2 0 2 0 0 0 0 0
....................................................................................................TAGCACCATTTGAAATCCGT............................................................. 20 1 3 0.67 2 0 0 0 2 0 0 0
....................................................................................................TAGCACCATTTGAAATCGGTCT........................................................... 22 2 3 0.67 2 0 0 0 1 1 0 0
....................................................................................................TAGCACCTTTTTAAATCAGTGTT.......................................................... 23 2 3 0.67 2 0 1 0 0 1 0 0
..................................................................................................AATAGCACCATTTGAAATCAGTGTA.......................................................... 25 3 5 0.60 3 0 1 0 1 0 1 0
....................................................................................................TAGCACCATTTGAAATCGGTGTA.......................................................... 23 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TAGCACCATTTTAAATCAGTGTA.......................................................... 23 2 4 0.50 2 0 1 0 0 0 1 0
....................................................................................................TAGCACCATTTGAAATCAGCG............................................................ 21 1 2 0.50 1 0 1 0 0 0 0 0
...................................................................................................ATAGCACCATTTGAAGTCAGTGTT.......................................................... 24 2 2 0.50 1 0 0 0 1 0 0 0
...................................................................................................CTAGCACCATTTGAAATCA............................................................... 19 0 2 0.50 1 0 0 0 1 0 0 0
...................................................................................................CTAGCACCATTTGAAATCATTGT........................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TCGCACCATTTTAAATCAGTGTT.......................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0
...................................................................................................ATAGCACCATGTGAAATCAGTGTT.......................................................... 24 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TAGCACCATTTGGAATCAGTGTA.......................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
..................................................................................................ACTAGCACCATTTGAAATCAGTGTT.......................................................... 25 1 2 0.50 1 0 0 0 0 1 0 0
...................................................................................................CTAGCACCATTTGAAATCAGTGTA.......................................................... 24 1 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TAGCACCGTTTGAAATCAGTGTT.......................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
................................................................................................AGTCTAGCACCATTTGAAATC................................................................ 21 1 2 0.50 1 0 0 0 0 1 0 0

Anti-sense strand reads

CCCAAATACCATTCTCTCGTAATACTTCTTTTTTTATCTAGGATTTCGAAGAAGTCCTTCGACCAAAGTATACCACCAAATCTAAATTTATCACTAACAGATCGTGGTAAACTTTAGTCACAAGAACCCCCTCTGGTCGACGCGGCGTGACGGTTGTCGTTTTCTTTACTCACCCTGTCGA

*******************************************...((((((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).)))))))))))).....******************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis
........................................................................................................................CGAGAACCCCCTCTGATCG.......................................... 19 2 20 0.05 1 1

Generated: 09/01/2015 at 12:23 PM