ID:

mml-mir-27b

 Coordinate:

chr15:108888097-108888193 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.6 -45.5 -45.4

Sense Strand Reads

CTGAGGAAGATGCCCACCGGTCACCGTCCCTGTATTTGTGCCCAGCGATGACCTCTCTAACAAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGGTTTCCGCTTTGTTCACAGTGGCTAAGTTCTGCACCTGAAGAGAAGGTGAGATGGGGACAGTTAAGTTGGAGCCGCTGGGGCAGAGGCTGTTGCTGACG

*****************************************************(((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))))....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116841

prostate		 SRR116843

cortex		 SRR116845

epididymis		 SRR116844

epididymis		 SRR116839

testes
..............................................................................................................TTCACAGTGGCTAAGTTCTGC.................................................................. 21 0 1 13754.00 13754 4842 3785 2506 2529 0 0 92
..............................................................................................................TTCACAGTGGCTAAGTTCTGCA................................................................. 22 0 1 9727.00 9727 4156 2406 1709 1371 7 8 70
..............................................................................................................TTCACAGTGGCTAAGTTCT.................................................................... 19 0 1 5823.00 5823 2719 1587 771 725 0 0 21
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAA................................................................ 23 1 1 4673.00 4673 1737 1336 885 664 1 0 50
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAT................................................................ 23 1 1 3345.00 3345 956 1212 674 428 2 7 66
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATC............................................................... 24 1 1 3040.00 3040 1 1 1 0 1596 1441 0
..............................................................................................................TTCACAGTGGCTAAGTTCTG................................................................... 20 0 1 2773.00 2773 1766 526 206 268 0 0 7
..............................................................................................................TTCACAGTGGCTAAGTTCTTC.................................................................. 21 1 1 2298.00 2298 46 979 638 618 0 0 17
..............................................................................................................TTCACAGTGGCTAAGTTCTGATC................................................................ 23 2 1 1241.00 1241 0 0 0 0 703 538 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCA................................................................. 22 1 1 1006.00 1006 16 385 336 263 0 0 6
..............................................................................................................TTCACAGTGGCTAAGTTCTGA.................................................................. 21 1 1 731.00 731 399 170 93 58 1 8 2
..............................................................................................................TTCACAGTGGCTAAGTTCTTCAA................................................................ 23 2 1 571.00 571 11 249 191 115 0 0 5
..............................................................................................................TTCACAGTGGCTAAGTTCTGT.................................................................. 21 1 1 367.00 367 189 95 41 39 0 0 3
..............................................................................................................TTCACAGTGGCTAAGTTCTGAATC............................................................... 24 2 1 352.00 352 0 0 0 0 221 131 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAATC.............................................................. 25 3 1 332.00 332 1 0 0 0 202 129 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAA................................................................. 22 1 1 319.00 319 181 60 36 38 1 1 2
....................................................................AGAGCTTAGCTGATTGGTGAACATC........................................................................................................ 25 2 1 292.00 292 0 0 0 0 143 149 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCA................................................................. 23 0 1 269.00 269 109 84 62 13 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTC..................................................................... 18 0 2 251.00 502 239 134 88 39 0 0 2
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATT............................................................... 24 2 1 228.00 228 40 95 53 18 7 7 8
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAA................................................................ 23 2 1 212.00 212 112 35 31 29 1 1 3
..............................................................................................................TTCACAGTGGCTAAGTTCTTCAT................................................................ 23 2 2 211.00 422 5 202 133 74 0 0 8
.............................................................................................................GTTCACAGTGGCTAAGTTCTGC.................................................................. 22 0 1 202.00 202 52 75 37 36 0 0 2
..............................................................................................................TTCACAGTGGCTAAGTTCTT................................................................... 20 1 2 195.50 391 45 154 93 96 0 0 3
..............................................................................................................TTCACAGTGGCTAAGTTCTGTT................................................................. 22 2 1 187.00 187 100 26 29 28 0 0 4
..............................................................................................................TTCACAGTGGCTAAGTTCTGCT................................................................. 22 1 1 181.00 181 92 37 30 21 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGTATC............................................................... 24 2 1 176.00 176 0 0 0 0 90 86 0
....................................................................AGAGCTTAGCTGATTGGTGAACA.......................................................................................................... 23 0 1 138.00 138 41 48 23 24 0 2 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCAT................................................................ 22 1 1 136.00 136 43 23 48 20 0 0 2
..............................................................................................................TTCACAGTGGCTAAGTTCTGTA................................................................. 22 1 1 132.00 132 78 26 15 9 0 1 3
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCATC............................................................... 25 1 1 130.00 130 0 0 0 0 81 49 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGCATC............................................................... 24 2 2 127.00 254 0 0 0 0 112 142 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAATC............................................................. 26 3 1 113.00 113 0 0 0 0 71 42 0
.............................................................................................................GTTCACAGTGGCTAAGTTCT.................................................................... 20 0 1 110.00 110 39 34 22 14 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTA................................................................... 20 1 2 97.50 195 79 43 49 24 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAG................................................................ 23 1 1 81.00 81 33 20 16 12 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACAGATC...................................................................................................... 27 3 1 68.00 68 0 0 0 0 45 23 0
..............................................................................................................TTCACAGTGGCTAAGTTCA.................................................................... 19 1 3 63.67 191 72 54 48 17 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGTAA................................................................ 23 2 1 61.00 61 32 17 9 3 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCAA................................................................ 24 1 1 60.00 60 25 18 14 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCCTC............................................................... 24 2 2 57.00 114 0 0 0 0 46 68 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATATC............................................................. 26 3 1 56.00 56 0 0 0 0 32 24 0
....................................................................AGAGCTTAGCTGATTGGTGAAC........................................................................................................... 22 0 1 49.00 49 5 24 13 6 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATA............................................................... 24 2 1 45.00 45 14 16 10 3 0 0 2
..............................................................................................................TTCACAGTGGCTAAGTT...................................................................... 17 0 2 43.00 86 44 27 12 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAT............................................................... 24 2 1 43.00 43 13 12 10 6 1 0 1
....................................................................AGAGCTTAGCTGATTGGTGAATC.......................................................................................................... 23 2 1 40.00 40 0 0 0 0 13 27 0
..............................................................................................................TTCACAGTGGCTAATTTCTGC.................................................................. 21 1 1 40.00 40 6 14 13 7 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTT.................................................................. 21 2 4 39.00 156 36 54 29 37 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAA............................................................... 24 2 1 37.00 37 12 14 6 1 2 1 1
....................................................................AGAGCTTAGCTGATTGGTGAAATC......................................................................................................... 24 3 1 37.00 37 0 0 0 0 14 23 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCG................................................................. 22 1 1 36.00 36 19 7 7 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGCAA................................................................ 23 2 2 35.00 70 22 15 29 3 0 0 1
....................................................................AGAGCTTAGCTGATTGGTGAACAGTATC..................................................................................................... 28 3 1 35.00 35 0 0 0 0 23 12 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAGATC............................................................. 26 3 2 34.50 69 0 0 0 0 48 21 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGCAT................................................................ 23 2 2 34.00 68 20 17 22 5 0 0 4
..............................................................................................................TTCACAGTGGCTAAGTTCTGTAT................................................................ 23 2 1 34.00 34 14 9 7 2 1 0 1
...............................................................................................................TCACAGTGGCTAAGTTCTGCAA................................................................ 22 1 1 32.00 32 14 8 9 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTAA.................................................................. 21 2 3 32.00 96 42 20 19 15 0 0 0
..............................................................................................................TTCACAGTGGCTACGTTCTGC.................................................................. 21 1 1 29.00 29 8 14 3 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATTT.............................................................. 25 2 1 27.00 27 4 4 18 1 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAA............................................................................................................ 21 0 1 27.00 27 6 16 1 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCC................................................................. 22 1 2 26.50 53 32 11 3 6 0 0 1
..............................................................................................................TTCACAGTGGCTAATTTCTGCA................................................................. 22 1 1 26.00 26 4 11 7 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTA.................................................................. 21 2 4 25.50 102 18 35 29 20 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTG................................................................... 21 0 1 25.00 25 7 8 5 4 0 0 1
...............................................................................................................TCACAGTGGCTAAGTTCTGCATT............................................................... 23 2 1 25.00 25 9 5 10 1 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACAG......................................................................................................... 24 0 1 25.00 25 2 10 7 4 0 0 2
..............................................................................................................TTCACAGTGGCTAAGT....................................................................... 16 0 2 24.50 49 27 12 9 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTT................................................................ 23 2 1 24.00 24 9 8 3 1 2 0 1
....................................................................AGAGCTTAGCTGATTGGTGAACAATC....................................................................................................... 26 2 1 23.00 23 0 0 0 0 12 11 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCA................................................................. 21 0 1 23.00 23 8 7 5 3 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTGAACA.......................................................................................................... 24 0 1 23.00 23 8 7 2 6 0 0 0
.................................................................................................................ACAGTGGCTAAGTTCTGCA................................................................. 19 0 1 22.00 22 16 3 3 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCTGC.................................................................. 21 1 1 21.00 21 14 5 1 1 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCAT................................................................ 24 1 1 21.00 21 9 8 4 0 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCTGCA................................................................. 22 1 1 21.00 21 3 5 1 11 0 0 1
.............................................................................................................GTTCACAGTGGCTAAGTTCTGA.................................................................. 22 1 1 20.00 20 12 5 2 1 0 0 0
..............................................................................................................TTCACAGTGGCTCAGTTCTGC.................................................................. 21 1 1 20.00 20 8 6 4 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGAA................................................................. 22 2 2 18.50 37 16 6 8 6 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTC................................................................ 23 1 1 18.00 18 0 0 0 0 5 13 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGATC................................................................ 24 2 1 18.00 18 0 0 0 0 8 10 0
..............................................................................................................TTCACAGTGGCTAATTTCTGCAT................................................................ 23 2 1 18.00 18 0 13 3 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTA................................................................ 23 2 1 18.00 18 4 10 3 0 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTA..................................................................... 18 1 8 17.25 138 74 33 17 14 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCT.................................................................... 19 1 1 17.00 17 1 6 2 8 0 0 0
..............................................................................................................TTCACATTGGCTAAGTTCTGCATC............................................................... 24 2 1 17.00 17 0 0 0 0 12 5 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAT................................................................. 22 2 2 16.50 33 14 7 2 3 3 4 0
..............................................................................................................CTCACAGTGGCTAAGTTCTGC.................................................................. 21 1 1 16.00 16 2 6 6 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTTTGC.................................................................. 21 1 1 16.00 16 4 2 4 6 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCTGC.................................................................. 21 1 1 16.00 16 5 1 0 9 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCCGCA................................................................. 22 1 2 15.50 31 6 6 14 5 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCATC............................................................... 24 2 1 15.00 15 0 0 0 0 10 5 0
.................................................................................................................ACAGTGGCTAAGTTCTGCATC............................................................... 21 1 1 15.00 15 0 0 0 0 5 10 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAC................................................................ 23 0 1 15.00 15 2 3 5 0 2 3 0
....................................................................AGAGCTTAGCTGATTGGTGAAAATC........................................................................................................ 25 3 2 15.00 30 0 0 0 0 14 16 0
...............................................................................................................TCACAGTGGCTAAGTTCTGC.................................................................. 20 0 1 14.00 14 3 5 2 4 0 0 0
.................................................................................................................ACAGTGGCTAAGTTCTGC.................................................................. 18 0 1 14.00 14 11 2 0 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTTTT.............................................................. 25 3 1 14.00 14 1 2 10 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCGA................................................................ 23 2 1 14.00 14 7 5 2 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCCA................................................................ 23 2 2 13.50 27 12 5 6 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTCCTGC.................................................................. 21 1 1 13.00 13 6 2 3 2 0 0 0
..............................................................................................................TTCACAGTGGCTAATTTCTGCAA................................................................ 23 2 1 13.00 13 2 6 3 1 0 0 1
.............................................................................................................GTTCACAGTGGCTAAGTTCTTCA................................................................. 23 1 1 13.00 13 0 9 4 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTAA................................................................. 22 2 3 13.00 39 6 20 8 5 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTGA............................................................................................................. 21 0 1 13.00 13 3 5 3 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAAA.............................................................. 25 3 1 12.00 12 7 2 1 1 1 0 0
..............................................................................................................TTCACAGTGGCCAAGTTCTGC.................................................................. 21 1 1 12.00 12 3 3 0 6 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTTTGCA................................................................. 22 1 1 12.00 12 3 0 3 6 0 0 0
..............................................................................................................TCCACAGTGGCTAAGTTCTGC.................................................................. 21 1 1 12.00 12 5 1 4 2 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGA............................................................................................................. 20 0 1 12.00 12 5 4 2 0 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTAAA................................................................. 22 2 1 12.00 12 3 1 6 2 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTTC.................................................................. 22 1 1 12.00 12 0 7 2 3 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTGAACATC........................................................................................................ 26 2 1 12.00 12 0 0 0 0 7 5 0
..............................................................................................................TTCACAGTGGCTACGTTCT.................................................................... 19 1 1 11.00 11 3 2 3 3 0 0 0
..............................................................................................................TTCACAGTTGCTAAGTTCTGCATC............................................................... 24 2 1 11.00 11 0 0 0 0 5 6 0
..............................................................................................................TCCACAGTGGCTAAGTTCTGCA................................................................. 22 1 1 11.00 11 4 0 3 4 0 0 0
..............................................................................................................TTCACATTGGCTAAGTTCTGC.................................................................. 21 1 1 10.00 10 3 4 1 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCCT................................................................ 23 2 2 10.00 20 8 7 2 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTTTGCATC............................................................... 24 2 1 10.00 10 0 0 0 0 4 6 0
..............................................................................................................TTCACAGTGGCTACGTTCTGCAA................................................................ 23 2 1 10.00 10 2 3 4 1 0 0 0
..............................................................................................................TTCACAGTGGCTACGTTCTGCA................................................................. 22 1 1 10.00 10 4 1 4 1 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCATC............................................................... 23 1 1 10.00 10 0 0 0 0 2 8 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCGT................................................................ 23 2 1 10.00 10 3 1 2 4 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCATA............................................................... 23 2 1 10.00 10 6 0 3 1 0 0 0
..............................................................................................................TTCACAGCGGCTAAGTTCTGC.................................................................. 21 1 1 10.00 10 1 5 0 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGTA................................................................. 22 2 2 9.50 19 4 3 11 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCTGCATC............................................................... 24 2 1 9.00 9 0 0 0 0 4 5 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAT................................................................ 23 2 1 9.00 9 7 1 0 0 1 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGAATC............................................................... 25 2 1 9.00 9 0 0 0 0 6 3 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGTAA................................................................ 23 3 2 9.00 18 4 6 6 1 0 0 1
.................................................................................................................ACAGTGGCTAAGTTCTG................................................................... 17 0 1 9.00 9 6 3 0 0 0 0 0
..............................................................................................................CTCACAGTGGCTAAGTTCTGCAA................................................................ 23 2 1 9.00 9 3 1 4 1 0 0 0
..............................................................................................................ATCACAGTGGCTAAGTTCTGC.................................................................. 21 1 1 9.00 9 5 3 0 1 0 0 0
..............................................................................................................TTCACAGTGGCTGAGTTCTGC.................................................................. 21 1 1 9.00 9 6 1 0 2 0 0 0
..............................................................................................................TTCACAGTGTCTAAGTTCTGC.................................................................. 21 1 1 9.00 9 1 5 2 1 0 0 0
..............................................................................................................TACACAGTGGCTAAGTTCTGC.................................................................. 21 1 1 9.00 9 4 2 2 1 0 0 0
..............................................................................................................TTCACAGAGGCTAAGTTCTGC.................................................................. 21 1 1 8.00 8 4 3 0 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTC................................................................... 20 1 1 8.00 8 3 0 0 3 1 1 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAGA............................................................... 24 2 1 8.00 8 3 2 2 0 1 0 0
..............................................................................................................TTCACCGTGGCTAAGTTCTGC.................................................................. 21 1 1 8.00 8 4 1 1 0 0 0 2
..............................................................................................................TTCACAGTGGCTAAGTTCCGAAA................................................................ 23 3 3 8.00 24 14 5 4 0 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGCACTC.............................................................. 25 2 1 8.00 8 0 0 0 0 5 3 0
..............................................................................................................TTCACAGTGGTTAAGTTCTGCAT................................................................ 23 2 1 8.00 8 2 1 2 2 0 0 1
..............................................................................................................TTCACAGTGGCGAAGTTCTGC.................................................................. 21 1 1 8.00 8 0 0 0 8 0 0 0
..............................................................................................................TTCACAGTGGCTAATTTCTGCATC............................................................... 24 2 1 8.00 8 0 0 0 0 5 3 0
....................................................................AGAGCTTAGCTGATTGGTGAACTATC....................................................................................................... 26 3 1 8.00 8 0 0 0 0 6 2 0
..............................................................................................................TTCACAGTGGTTAAGTTCTGCA................................................................. 22 1 1 8.00 8 3 4 1 0 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGAA................................................................. 23 1 1 8.00 8 4 0 4 0 0 0 0
..............................................................................................................TTCACAGTGGCCAAGTTCTGCA................................................................. 22 1 1 8.00 8 1 3 0 4 0 0 0
..............................................................................................................TTTACAGTGGCTAAGTTCTGC.................................................................. 21 1 1 7.00 7 2 0 3 2 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACAGT........................................................................................................ 25 0 1 7.00 7 1 4 1 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCT.................................................................... 19 1 1 7.00 7 6 1 0 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCTG................................................................... 20 1 1 7.00 7 6 1 0 0 0 0 0
..............................................................................................................TTCACGGTGGCTAAGTTCTGC.................................................................. 21 1 1 7.00 7 2 1 0 4 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCTGCAA................................................................ 23 2 1 7.00 7 3 1 1 2 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAAA........................................................................................................... 22 1 1 7.00 7 1 4 0 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATAA.............................................................. 25 3 1 7.00 7 2 4 1 0 0 0 0
..............................................................................................................TTCACAGTGACTAAGTTCTGC.................................................................. 21 1 1 7.00 7 4 1 2 0 0 0 0
..............................................................................................................CTCACAGTGGCTAAGTTCT.................................................................... 19 1 1 7.00 7 2 2 2 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTCCA................................................................. 22 1 1 7.00 7 2 3 2 0 0 0 0
..............................................................................................................TCCACAGTGGCTAAGTTCT.................................................................... 19 1 1 7.00 7 1 3 2 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGTAT................................................................ 23 3 4 6.75 27 11 3 10 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTTA................................................................. 22 2 2 6.50 13 3 6 1 2 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTT..................................................................... 18 1 6 6.33 38 19 11 6 2 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTGAAA........................................................................................................... 23 1 1 6.00 6 3 1 1 0 0 1 0
...............................................................................................................TCACAGTGGCTAAGTTCTG................................................................... 19 0 1 6.00 6 2 2 2 0 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACCTC........................................................................................................ 25 3 1 6.00 6 0 0 0 0 3 3 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCG................................................................. 22 2 1 6.00 6 1 2 1 2 0 0 0
..............................................................................................................TTCACAGTGGCTACGTTCTGCATC............................................................... 24 2 1 6.00 6 0 0 0 0 3 3 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAG................................................................ 23 2 1 6.00 6 3 1 2 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGGA................................................................. 22 1 1 6.00 6 3 1 1 1 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCTT................................................................ 22 2 1 6.00 6 3 1 1 1 0 0 0
..............................................................................................................TTCTCAGTGGCTAAGTTCTGC.................................................................. 21 1 1 6.00 6 3 0 0 2 0 0 1
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCAATC.............................................................. 26 3 1 6.00 6 0 0 0 0 3 3 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCT................................................................. 22 2 4 6.00 24 0 5 10 9 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAAAAATC....................................................................................................... 26 3 1 6.00 6 0 0 0 0 6 0 0
..............................................................................................................CTCACAGTGGCTAAGTTCTGCAT................................................................ 23 2 1 6.00 6 3 0 1 2 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCAAT............................................................... 23 2 1 6.00 6 2 3 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAATTTCTG................................................................... 20 1 1 6.00 6 2 3 0 1 0 0 0
..............................................................................................................TTCACAGTGGCTGAGTTCTGCA................................................................. 22 1 1 6.00 6 6 0 0 0 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTC..................................................................... 19 0 2 5.50 11 5 4 2 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCATT............................................................... 24 3 4 5.50 22 0 12 7 1 0 0 2
..............................................................................................................TTCACAGTTGCTAAGTTCCGCATC............................................................... 24 3 2 5.50 11 0 0 0 0 5 6 0
.............................................CGATGACCTCTCTAACAAGGTGCATC.............................................................................................................................. 26 2 1 5.00 5 0 0 0 0 3 2 0
..............................................................................................................TTCACTGTGGCTAAGTTCTGC.................................................................. 21 1 1 5.00 5 2 2 0 1 0 0 0
..............................................................................................................TCCACAGTGGCTAAGTTCTGCAA................................................................ 23 2 1 5.00 5 3 2 0 0 0 0 0
..............................................................................................................TTCACAGTTGCTAAGTTCTGCA................................................................. 22 1 1 5.00 5 2 2 0 1 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACAA......................................................................................................... 24 1 1 5.00 5 2 2 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTAC.................................................................. 21 1 1 5.00 5 2 1 0 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCTGCA................................................................. 22 1 1 5.00 5 4 1 0 0 0 0 0
..............................................................................................................TTCACAGTGTCTAAGTTCTGCATC............................................................... 24 2 1 5.00 5 0 0 0 0 2 3 0
..............................................................................................................TTCACAGTGGCTAAGCTCTGC.................................................................. 21 1 1 5.00 5 2 2 1 0 0 0 0
.............................................................................................................CTTCACAGTGGCTAAGTTCTGC.................................................................. 22 1 1 5.00 5 2 1 2 0 0 0 0
....................................................................AGAGCTTAGCTGATTGTTGAACATC........................................................................................................ 25 3 1 5.00 5 0 0 0 0 2 3 0
..............................................................................................................TTCACAGTGGCTAAGGTCTGCAA................................................................ 23 2 1 5.00 5 4 0 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAATTCTGC.................................................................. 21 1 1 5.00 5 3 0 1 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTCCTGCA................................................................. 22 1 1 5.00 5 3 1 0 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAACATC............................................................. 26 3 1 5.00 5 0 0 0 0 3 2 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGGATC............................................................... 24 2 1 5.00 5 0 0 0 0 3 2 0
.................................................................................................................ACAGTGGCTAAGTTCTGCAA................................................................ 20 1 3 5.00 15 12 1 1 1 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTGAA............................................................................................................ 22 0 1 5.00 5 1 3 1 0 0 0 0
..............................................................................................................TTCACATTGGCTAAGTTCTGCA................................................................. 22 1 1 5.00 5 1 3 0 1 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGTATC............................................................... 25 2 1 5.00 5 0 0 0 0 3 2 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAC............................................................... 24 1 1 5.00 5 0 2 0 0 0 3 0
..............................................................................................................TTCACAGTGGCTAAGTTTT.................................................................... 19 1 4 4.75 19 7 7 1 4 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCCGCATT............................................................... 24 3 2 4.50 9 2 6 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAAA............................................................... 24 3 7 4.43 31 17 6 3 4 0 1 0
..............................................................................................................TCCACAGTGGCTAAGTTCTGCAT................................................................ 23 2 1 4.00 4 2 0 1 1 0 0 0
..............................................................................................................TTCACAGTTGCTAAGTTCTTCA................................................................. 22 2 1 4.00 4 0 3 0 0 0 0 1
..............................................................................................................TTCACAGTAGCTAAGTTCTGC.................................................................. 21 1 1 4.00 4 1 2 0 1 0 0 0
..............................................................................................................TTCACAGTGGCGAAGTTCTGCA................................................................. 22 1 1 4.00 4 0 0 0 4 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCTG................................................................... 20 1 1 4.00 4 3 0 0 1 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCT.................................................................... 18 0 1 4.00 4 2 1 1 0 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGTAT................................................................ 24 2 1 4.00 4 1 2 1 0 0 0 0
..............................................................................................................TTCACAGGGGCTAAGTTCTGCAA................................................................ 23 2 1 4.00 4 1 0 2 1 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGAACT.......................................................................................................... 23 1 1 4.00 4 0 2 2 0 0 0 0
..............................................................................................................TTCACAGTGTCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 0 3 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTTTGCAA................................................................ 23 2 1 4.00 4 1 2 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTCAGTTCTGCA................................................................. 22 1 1 4.00 4 1 1 0 1 1 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCAG................................................................ 23 2 1 4.00 4 0 2 2 0 0 0 0
..............................................................................................................TTCACAGTGCCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 1 1 0 2 0 0 0
..............................................................................................................TTCACAGCGGCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 3 0 1 0 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGAAA................................................................ 24 2 1 4.00 4 2 2 0 0 0 0 0
..............................................................................................................TTCACAGGGGCTAAGTTCTGC.................................................................. 21 1 1 4.00 4 2 1 1 0 0 0 0
............................................................................................................AATTCACAGTGGCTAAGTTCTGC.................................................................. 23 2 1 4.00 4 1 0 2 1 0 0 0
..............................................................................................................CTCACAGTGGCTAAGTTCTG................................................................... 20 1 1 4.00 4 2 1 0 1 0 0 0
..............................................................................................................TTCACAGTTGCTAAGTTCTGC.................................................................. 21 1 1 4.00 4 1 1 1 1 0 0 0
..............................................................................................................TTCGCAGTGGCTAAGTTCTGCAT................................................................ 23 2 1 4.00 4 1 1 1 0 0 0 1
..............................................................................................................TTCACTGTGGCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 1 0 1 0 0 0 2
.............................................................................................................GTTCACAGTGGCTAAGTTCTGT.................................................................. 22 1 1 4.00 4 2 1 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTCAGTTCT.................................................................... 19 1 1 4.00 4 2 0 0 2 0 0 0
..............................................................................................................TACACAGTGGCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 1 1 1 1 0 0 0
.................................................................................................................ACAGTGGCTAAGTTCTGCAT................................................................ 20 1 2 4.00 8 4 3 1 0 0 0 0
..............................................................................................................ATCACAGTGGCTAAGTTCTGCATC............................................................... 24 2 1 4.00 4 0 0 0 0 2 2 0
..............................................................................................................CTCACAGTGGCTAAGTTCTGCA................................................................. 22 1 1 4.00 4 2 0 1 1 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGCATTT.............................................................. 24 2 1 4.00 4 0 1 3 0 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTGT.................................................................. 20 1 1 4.00 4 0 0 3 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGTTT................................................................ 23 3 7 3.57 25 10 7 5 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGGT................................................................. 22 2 2 3.50 7 3 2 1 0 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATTTT............................................................. 26 3 2 3.50 7 0 2 5 0 0 0 0
................................................................................................................CACAGTGGCTAAGTTCTGCATT............................................................... 22 2 3 3.33 10 4 2 3 1 0 0 0
..............................................................................................................TTCACGGTGGCTAAGTTCTG................................................................... 20 1 1 3.00 3 1 0 0 2 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTTCAT................................................................ 24 2 1 3.00 3 1 1 1 0 0 0 0
.............................................................................................................CTTCACAGTGGCTAAGTTCTG................................................................... 21 1 1 3.00 3 1 2 0 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTAT.................................................................... 19 1 1 3.00 3 0 1 1 1 0 0 0
..............................................................................................................TTCACAGCGGCTAAGTTCTGCAT................................................................ 23 2 1 3.00 3 1 2 0 0 0 0 0
..............................................GATGACCTCTCTAACAAGGTGCATC.............................................................................................................................. 25 2 1 3.00 3 0 0 0 0 2 1 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCT................................................................. 23 1 1 3.00 3 1 0 0 2 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTTAACA.......................................................................................................... 24 1 1 3.00 3 0 2 0 1 0 0 0
....................................................................AGAGCTTAGCTGATTGGTGATC........................................................................................................... 22 1 1 3.00 3 0 0 0 0 1 2 0
...............................................................................................................TCACAGTGGCTAAGTTCTGA.................................................................. 20 1 1 3.00 3 1 0 2 0 0 0 0
..............................................................................................................TTCACAGTGTCTAAGTTCTGCAT................................................................ 23 2 1 3.00 3 0 3 0 0 0 0 0
..............................................................................................................TTCACATTGGCTAAGTTCTGCAA................................................................ 23 2 1 3.00 3 0 2 1 0 0 0 0
..............................................................................................................TTCACAGTGGTTAAGTTCTGC.................................................................. 21 1 1 3.00 3 1 1 0 1 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTTTGCATC............................................................... 25 2 1 3.00 3 0 0 0 0 2 1 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCATTA.............................................................. 25 3 1 3.00 3 0 0 2 1 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGTAA................................................................ 24 2 1 3.00 3 2 1 0 0 0 0 0
..............................................................................................................TTCACAATGGCTAAGTTCTGC.................................................................. 21 1 1 3.00 3 1 1 1 0 0 0 0
..............................................................................................................TCCACAGTGGCTAAGTTCTG................................................................... 20 1 1 3.00 3 2 1 0 0 0 0 0
..............................................................................................................TTCACAGTGGTTAAGTTCTGCAA................................................................ 23 2 2 3.00 6 1 3 1 1 0 0 0
...................................................................................................................AGTGGCTAAGTTCTGCA................................................................. 17 0 1 3.00 3 1 2 0 0 0 0 0
..............................................................................................................TTCACAGTGGCGAAGTTCT.................................................................... 19 1 1 3.00 3 0 0 0 3 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAATT.............................................................. 25 2 1 3.00 3 0 0 0 0 2 1 0
....................................................................AGAGCTTAGCTGATTGGTGAACAGA........................................................................................................ 25 1 1 3.00 3 1 0 0 0 2 0 0
................................................................................................................CACAGTGGCTAAGTTCTGCATC............................................................... 22 1 1 3.00 3 0 0 0 0 1 2 0
................................................................................................................CACAGTGGCTAAGTTCTGCAT................................................................ 21 1 1 3.00 3 0 0 1 2 0 0 0
.............................................................................................................GTTCACAGTGGCTAAGTTCTGCCTC............................................................... 25 2 2 3.00 6 0 0 0 0 6 0 0
..............................................................................................................TTCACAGTGGCTACGTTCTGCAT................................................................ 23 2 1 3.00 3 0 2 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAAG............................................................... 24 2 1 3.00 3 0 0 2 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTTCATTT.............................................................. 25 3 1 3.00 3 0 0 3 0 0 0 0
..............................................................................................................TTCATAGTGGCTAAGTTCTGC.................................................................. 21 1 1 3.00 3 1 1 1 0 0 0 0
..............................................................................................................TTCACTGTGGCTAAGTTCTGCATC............................................................... 24 2 1 3.00 3 0 0 0 0 2 1 0
....................................................................AGAGCTTGGCTGATTGGTGAACATC........................................................................................................ 25 3 1 3.00 3 0 0 0 0 0 3 0
..............................................................................................................TTCACAGTGGCTGAGTTCTGCAA................................................................ 23 2 1 3.00 3 2 1 0 0 0 0 0
..............................................................................................................TTCACGGTGGCTAAGTTCTGCA................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTTC............................................................... 24 2 1 3.00 3 0 0 0 0 2 1 0
..............................................................................................................TTCACAGGGGCTAAGTTCTG................................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
..............................................................................................................TTCACAGAGGCTAAGTTCTGCAA................................................................ 23 2 1 3.00 3 2 1 0 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAC................................................................ 23 1 1 3.00 3 0 1 0 0 1 1 0
..............................................................................................................TTCACAGTGGCTAAGTTCTCC.................................................................. 21 1 1 3.00 3 1 2 0 0 0 0 0
...............................................................................................................TCACAGTGGCTAAGTTCTTCA................................................................. 21 1 1 3.00 3 0 1 1 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGATCT.................................................................... 19 1 1 3.00 3 3 0 0 0 0 0 0
...............................................................................................................TCGCAGTGGCTAAGTTCTGCAA................................................................ 22 2 1 3.00 3 1 0 0 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGAAAC............................................................... 24 2 1 3.00 3 0 0 0 0 3 0 0
..............................................................................................................TTCACCGTGGCTAAGTTCTGCA................................................................. 22 1 1 3.00 3 1 0 1 1 0 0 0
..............................................................................................................TTCACAGTGGCTAAGCTCTGCA................................................................. 22 1 1 3.00 3 2 1 0 0 0 0 0
...................................................................CAGAGCTTAGCTGATTGGTG.............................................................................................................. 20 0 1 3.00 3 0 1 0 2 0 0 0
..............................................................................................................TTCACAGTGGCTAATTTCT.................................................................... 19 1 6 3.00 18 1 9 4 4 0 0 0
..............................................................................................................TTCACAGTGGCTCAGTTCTGCATC............................................................... 24 2 1 3.00 3 0 0 0 0 2 1 0
..............................................................................................................TTCACAGTGGCTAACTTCTGC.................................................................. 21 1 1 3.00 3 0 0 1 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGGTCTGCAT................................................................ 23 2 1 3.00 3 2 1 0 0 0 0 0
..............................................................................................................TTCACAGTGGCTAATTTCTTCA................................................................. 22 2 7 2.57 18 0 9 4 5 0 0 0
..............................................................................................................TACACAGTGGCTAAGTTCTGCAA................................................................ 23 2 2 2.50 5 4 0 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCG.................................................................... 19 1 2 2.50 5 2 0 0 2 0 0 1
..............................................................................................................TTCACAGTGGCTAAGTTCTGCTTT............................................................... 24 3 4 2.50 10 1 1 6 2 0 0 0
..............................................................................................................TTCACAGTGGCTAAGTTCTGCAGT............................................................... 24 2 2 2.50 5 4 1 0 0 0 0 0
....................................................................AGAGCTTACCTGATTGGTGAACATC........................................................................................................ 25 3 2 2.50 5 0 0 0 0 0 5 0
..............................................................................................................TACACAGTGGCTAAGTTCT.................................................................... 19 1 2 2.50 5 4 0 1 0 0 0 0
..............................................................................................................TTCACAGTGGCTCAGTTCTGCAA................................................................ 23 2 2 2.50 5 3 2 0 0 0 0 0
.................................................................................................................ACAGTGGCTAAGTTCT.................................................................... 16 0 3 2.33 7 7 0 0 0 0 0 0

Anti-sense strand reads

GACTCCTTCTACGGGTGGCCAGTGGCAGGGACATAAACACGGGTCGCTACTGGAGAGATTGTTCCACGTCTCGAATCGACTAACCACTTGTCACTAACCAAAGGCGAAACAAGTGTCACCGATTCAAGACGTGGACTTCTCTTCCACTCTACCCCTGTCAATTCAACCTCGGCGACCCCGTCTCCGACAACGACTGC

***************************************************(((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))))....***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116839

testes		 SRR116843

cortex
..........................................................................................................AAACAAGTGTCACCGATTCAA...................................................................... 21 0 1 1.00 1 0 1
.................................................................................................CCAAAGGCGAAACAAGTGTCACCGAT.......................................................................... 26 0 1 1.00 1 1 0

Generated: 09/01/2015 at 12:11 PM