ID:

mml-mir-27a

Coordinate:

chr19:13738608-13738685 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.1 -47.1 -47.1

Sense Strand Reads

GGATGCCGCCCGGGGACGGGGTGGCAGAGGCCCCGAAGCCTGTGCCTGGCCTGAGGAGCAGGGCTTAGCTGCTTGTGAGCAGGGTCCACACCAAGTCGTGTTCACAGTGGCTAAGTTCCGCCCCCCAGGCCCTCACCTCCTCCGGCCTTGCCGCCTGTCCCCTGCTGCCGCCTGTCTG

********************************************...((((((.((.((.(((((((((((((.(((((((.((...........)).)))))))))))))))))))).)).)).))))))....*******************************************
Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle
SRR116841

prostate
SRR116840

epididymis
SRR116843

cortex
SRR116844

epididymis
SRR116845

epididymis
SRR116839

testes
....................................................................................................TTCACAGTGGCTAAGTTCCG.......................................................... 20 0 1 3236.00 3236 1635 654 570 355 0 0 22
....................................................................................................TTCACAGTGGCTAAGTTCC........................................................... 19 0 1 283.00 283 100 91 64 28 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGT......................................................... 21 1 1 262.00 262 95 80 52 33 0 0 2
....................................................................................................TTCACAGTGGCTAAGTTCCGA......................................................... 21 1 1 258.00 258 108 58 62 29 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTC............................................................ 18 0 2 251.00 502 239 88 134 39 0 0 2
....................................................................................................TTCACAGTGGCTAAGTTCCGC......................................................... 21 0 1 197.00 197 67 65 41 23 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCCGCATC...................................................... 24 2 2 127.00 254 0 0 0 0 142 112 0
....................................................................................................TTCACAGTGGCTAAGTTCA........................................................... 19 1 3 63.67 191 72 48 54 17 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCTC...................................................... 24 2 2 57.00 114 0 0 0 0 68 46 0
....................................................................................................TTCACAGTGGCTAAGTTCCT.......................................................... 20 1 2 44.50 89 5 39 27 17 0 0 1
....................................................................................................TTCACAGTGGCTAAGTT............................................................. 17 0 2 43.00 86 44 12 27 3 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTT........................................................ 22 2 1 43.00 43 19 10 4 10 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCAA....................................................... 23 2 2 35.00 70 22 29 15 3 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCCGCAT....................................................... 23 2 2 34.00 68 20 22 17 5 0 0 4
....................................................................................................TTCACAGTGGCTAAGTTCTGCC........................................................ 22 1 2 26.50 53 32 3 11 6 0 0 1
....................................................................................................TTCACAGTGGCTAAGT.............................................................. 16 0 2 24.50 49 27 9 12 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGATC....................................................... 23 2 1 21.00 21 0 0 0 0 16 5 0
....................................................................................................TTCACAGTGGCTAATTTCCG.......................................................... 20 1 1 21.00 21 1 8 8 3 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCCGAA........................................................ 22 2 2 18.50 37 16 8 6 6 0 0 1
....................................................................................................TTCGCAGTGGCTAAGTTCCG.......................................................... 20 1 1 18.00 18 4 3 6 5 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAT........................................................ 22 2 1 18.00 18 9 4 3 1 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTA............................................................ 18 1 8 17.25 138 74 17 33 14 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCA........................................................ 22 1 2 15.50 31 6 14 6 5 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCCTC...................................................... 24 1 1 14.00 14 0 0 0 0 5 9 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCA....................................................... 23 2 2 13.50 27 12 6 5 4 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCATC........................................................ 22 2 1 13.00 13 0 0 0 0 12 1 0
...........................................................AGGGCTTAGCTGCTTGTGAGCAATC.............................................................................................. 25 3 1 11.00 11 0 0 0 0 11 0 0
...........................................................AGGGCTTAGCTGCTTGTGAGCATC............................................................................................... 24 2 1 10.00 10 0 0 0 0 10 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCT....................................................... 23 2 2 10.00 20 8 2 7 3 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTA........................................................ 22 2 2 9.50 19 4 11 3 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCTC......................................................... 21 1 1 9.00 9 0 4 4 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTAA....................................................... 23 3 2 9.00 18 4 6 6 1 0 0 1
....................................................................................................TTCACAGTGGCTCAGTTCCG.......................................................... 20 1 1 9.00 9 5 2 1 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCA.......................................................... 20 1 1 9.00 9 2 4 3 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAAA....................................................... 23 3 3 8.00 24 14 4 5 0 0 0 1
....................................................................................................TTCACAGTGGCTAAGGTCCG.......................................................... 20 1 1 8.00 8 6 0 2 0 0 0 0
...........................................................AGGGCTTAGCTGCTTGTGAGCA................................................................................................. 22 0 1 8.00 8 2 2 1 2 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCCGTTT....................................................... 23 3 3 7.67 23 15 4 4 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTAT....................................................... 23 3 4 6.75 27 11 10 3 3 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTT............................................................ 18 1 6 6.33 38 19 6 11 2 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGATA....................................................... 23 3 1 6.00 6 4 1 0 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCAATC..................................................... 25 3 1 6.00 6 0 0 0 0 2 4 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTATC..................................................... 25 3 2 5.50 11 0 0 0 0 3 8 0
...................................................................................................GTTCACAGTGGCTAAGTTC............................................................ 19 0 2 5.50 11 5 2 4 0 0 0 0
....................................................................................................TTCACAGTTGCTAAGTTCCGCATC...................................................... 24 3 2 5.50 11 0 0 0 0 6 5 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCATC..................................................... 25 3 1 5.00 5 0 0 0 0 4 1 0
....................................................................................................CTCACAGTGGCTAAGTTCCG.......................................................... 20 1 1 5.00 5 0 1 1 3 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTTA....................................................... 23 3 3 4.67 14 6 2 6 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCATT...................................................... 24 3 2 4.50 9 2 1 6 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTTCG.......................................................... 20 1 1 4.00 4 2 0 0 2 0 0 0
...........................................................AGGGCTTAGCTGCTTGTGAGCAA................................................................................................ 23 1 1 4.00 4 1 2 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCT........................................................ 22 1 1 4.00 4 2 1 1 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCG.......................................................... 20 1 1 4.00 4 1 0 2 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCTT......................................................... 21 2 7 3.14 22 8 8 3 3 0 0 0
....................................................................................................TTCACAGTGGCTAATTTCCGA......................................................... 21 2 1 3.00 3 0 2 1 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCTGCCTC...................................................... 25 2 2 3.00 6 0 0 0 0 0 6 0
....................................................................................................TTCACAGTGGCTAAGTTCCC.......................................................... 20 1 1 3.00 3 2 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGCTCCG.......................................................... 20 1 1 3.00 3 3 0 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGA......................................................... 21 2 1 3.00 3 2 0 0 0 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCG........................................................... 19 1 2 2.50 5 2 0 0 2 0 0 1
....................................................................................................TTCACAGTGGCTAAGTCCCG.......................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCCT....................................................... 23 1 1 2.00 2 0 0 2 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCCG.......................................................... 17 0 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................TTCACAGCGGCTAAGTTCCG.......................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................AATTCACAGTGGCTAAGTTCCG.......................................................... 22 2 1 2.00 2 1 0 0 1 0 0 0
....................................................................................................TTCACAGTGGCTACGTTCCG.......................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTGAGTTCCG.......................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
....................................................................................................TCCACAGTGGCTAAGTTCCG.......................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TTCACATTGGCTAAGTTCCG.......................................................... 20 1 1 2.00 2 0 0 2 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCCAATC.................................................... 26 3 1 2.00 2 0 0 0 0 2 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGT......................................................... 21 2 1 2.00 2 0 0 1 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAATC...................................................... 24 3 3 2.00 6 0 0 0 0 5 1 0
....................................................................................................TTCACAATGGCTAAGTTCCG.......................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TTCACAGTGACTAAGTTCCG.......................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0
...................................................................................................CTTCACAGTGGCTAAGTTCCG.......................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCGC......................................................... 21 1 1 2.00 2 0 0 1 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTTT...................................................... 24 3 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................TTCACAGTGGTTAAGTTCCG.......................................................... 20 1 1 2.00 2 1 0 0 1 0 0 0
....................................................................................................TTCACAGTCGCTAAGTTCCG.......................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTT....................................................... 23 2 1 2.00 2 0 1 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAAT....................................................... 23 3 4 1.75 7 5 1 0 1 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCCGCATC...................................................... 21 2 3 1.67 5 0 0 0 0 5 0 0
....................................................................................................TTCACAGTGGCTAAGTTCATC......................................................... 21 2 6 1.67 10 0 0 0 1 8 1 0
....................................................................................................TTCACAGTGGCTAAGTTCCTA......................................................... 21 2 5 1.60 8 1 3 1 3 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTAT...................................................... 24 3 2 1.50 3 1 2 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGAC........................................................ 22 2 2 1.50 3 1 0 2 0 0 0 0
....................................................................................................TTCACAGTGGCTAAG............................................................... 15 0 6 1.33 8 6 0 1 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCTT...................................................... 24 3 3 1.33 4 2 1 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGATC............................................................ 18 1 4 1.25 5 0 0 0 0 4 1 0
....................................................................................................TTCACAGTGGCTAAGTTCAG.......................................................... 20 1 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGTT....................................................... 23 3 2 1.00 2 0 0 2 0 0 0 0
.....................................................................................................TCACAGTGGCTAAGTTCCGC......................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................GGGGCTTAGCTGCTTGTGAGCA................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TCACAGTGGCTAAGTTCCGT......................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGT........................................................ 22 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGA........................................................ 22 2 2 1.00 2 1 0 0 1 0 0 0
....................................................................................................TTCACATTGGCTAAGTTCCGATC....................................................... 23 3 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCCA....................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTACGTTCCGCCACTC.................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGACTC...................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................ATTCACAGTGGCTAAGTTCCG.......................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTATC...................................................... 24 3 2 1.00 2 0 0 0 0 1 1 0
....................................................................................................TTCACAGTCGCTAAGTTCCGATC....................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCTC......................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGATCCG.......................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTA....................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGAGGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................CTTCACAGTGGCTAAGTTCCGT......................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTTACAGTGGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACTGTGGCTAAGTTCCGC......................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACCGTGGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCAG....................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAGA....................................................... 23 3 2 1.00 2 0 0 2 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCGT......................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGCTCCGC......................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCGCC..................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
...........................................................AGGGCTTAGCTGCTTGTGAGCAGGATC............................................................................................ 27 1 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTAGCTAAGTTCCGC......................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCCCCTC...................................................... 24 2 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCTGCCATC..................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCGCACCA................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ATCACAGTGGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTTGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................AGTGGCTAAGTTCCG.......................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGTC........................................................ 22 2 2 1.00 2 0 0 0 0 1 1 0
......................................................................................................CACAGTGGCTAAGTTCCGT......................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................CGTTCACAGTGGCTAAGTTC............................................................ 20 1 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TTCCCAGTGGCTAAGTTCTGCC........................................................ 22 2 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAATTTCCGCT........................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTGCG.......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCAGCCAC...................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAGGTTCCG.......................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCTCA........................................................ 22 2 4 1.00 4 0 0 1 2 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCCGG......................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGACTC...................................................... 24 3 2 1.00 2 0 0 0 0 1 1 0
....................................................................................................TTCACCGTGGCTAAGTTCCGA......................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................TCCTGTTCACAGTGGCTAAGTTCTGC......................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGC......................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTC............................................................ 18 1 2 1.00 2 1 0 1 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCATC......................................................... 22 2 2 1.00 2 0 0 0 0 1 1 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCGCTCCA................................................... 27 3 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCG....................................................... 23 2 2 1.00 2 1 0 0 1 0 0 0
....................................................................................................TTCACAGTGGGTAAGTTCCGT......................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCC........................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCGGAC..................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCTCAGTGGCTAAGTTCCG.......................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCC........................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTTC........................................................... 19 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................TCCACAGTGGCTAAGTTCCGC......................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAATTCCG.......................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCC....................................................... 23 1 2 1.00 2 1 0 0 0 0 1 0
...........................................................AGGGCTTAGCTGCTTGTGAGCAGG............................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGATAAGTTCCGA......................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCCGA......................................................... 18 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................GGGTCCACACCAAGTCGTGATC........................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCCATC..................................................... 25 2 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTCGCTAAGTTCCGC......................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGTCA....................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTG............................................................ 18 1 6 0.83 5 3 1 1 0 0 0 0
....................................................................................................TTCACAGTGTCTAAGTTCCGCATC...................................................... 24 3 6 0.83 5 0 0 0 0 5 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGATT....................................................... 23 3 5 0.80 4 2 1 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCAA......................................................... 21 2 7 0.71 5 3 1 1 0 0 0 0
....................................................................................................TTCACATTGGCTAAGTTCCGCATC...................................................... 24 3 3 0.67 2 0 0 0 0 1 1 0
....................................................................................................TTCACAGTTGCTAAGTTCCGATC....................................................... 23 3 3 0.67 2 0 0 0 0 2 0 0
...................................................................................................GTTCACAGTGGCTAAGTTA............................................................ 19 1 3 0.67 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCGGC......................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................TCACAGTGGCTAAGTTCTGCCA....................................................... 22 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCCTC........................................................ 22 2 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGCTCTGCC........................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCTATC........................................................ 23 3 8 0.50 4 0 0 0 0 3 1 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGCGT...................................................... 24 3 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGTA....................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TTCATAGTGGCTAAGTTCCGCA........................................................ 22 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGCCTAAGTTCC........................................................... 19 1 2 0.50 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTCGCTAAGTTCCGCATC...................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGCATC...................................................... 24 3 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCCGG...................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TCCACAGTGGCTAAGTTCC........................................................... 19 1 2 0.50 1 0 0 0 1 0 0 0
.......................................................................................................GCAGTGGCTAAGTTCCGC......................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCCCA........................................................ 22 2 4 0.50 2 0 1 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCAACCC.................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCGCATC...................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTAAGTTCTTCC........................................................ 22 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCGTT........................................................ 22 3 2 0.50 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGACC....................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGCA........................................................ 22 2 2 0.50 1 0 0 1 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTCA........................................................... 20 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................TCACAGTGGCTAAGTTCCGCATC...................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAAC....................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGTCTAAGTTCCGA......................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGAACG...................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGGTCCGG......................................................... 21 2 2 0.50 1 0 0 1 0 0 0 0
....................................................................................................TTCACATTGGCTAAGTTCCGT......................................................... 21 2 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGCTCTC..................................................... 25 3 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCTAA...................................................... 24 3 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGCACC...................................................... 24 1 2 0.50 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGACTAAGTTCCGCATC...................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTAAGTA............................................................. 17 1 20 0.45 9 0 5 4 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCCCATC...................................................... 24 3 5 0.40 2 0 0 0 0 1 1 0
.....................................................................................................TCACAGTGGCTAAGTTCTGCCT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCTTC........................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................TTCACTGTGGCTAAGTTCCGCATC...................................................... 24 3 3 0.33 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTACGCA........................................................ 22 2 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................TTTACAGTGGCTAAGTTCCGCAT....................................................... 23 3 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTGAGTTCTGCC........................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCTGCC........................................................ 19 1 3 0.33 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTCGCC....................................................... 23 3 3 0.33 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTGGCTCAGTTCTGCC........................................................ 22 2 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGCAA....................................................... 23 3 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTACGTTCTGCCA....................................................... 23 3 3 0.33 1 0 0 0 0 0 0 1
....................................................................................................TTCACAGTGGCTAAGTTCAGA......................................................... 21 2 6 0.33 2 1 0 1 0 0 0 0
................................................................................................CACGTTCACAGTGGCTAAGTTCTGC......................................................... 25 3 3 0.33 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGGTCTGCC........................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................TTCACTGTGGCTAAGTTCC........................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGACA....................................................... 23 3 6 0.33 2 2 0 0 0 0 0 0
.................................................................................................CCGTTCACAGTGGCTAAGTT............................................................. 20 2 3 0.33 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGGTCCGCATC...................................................... 24 3 3 0.33 1 0 0 0 0 1 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCGTT........................................................ 22 3 3 0.33 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTAGCTAAGTTCCGA......................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................CACAGTGGCTAAGTTCTGCCTC...................................................... 22 2 3 0.33 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCGGAA....................................................... 23 3 10 0.30 3 3 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAGGTTCC........................................................... 19 1 4 0.25 1 0 0 0 1 0 0 0
.......................................................................................................ACAGTGGCTAAGTTC............................................................ 15 0 4 0.25 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTTTGCCTC...................................................... 24 3 4 0.25 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTACGTTCTGCCTC...................................................... 24 3 4 0.25 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTGAGTTCC........................................................... 19 1 4 0.25 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCGAAGTTCCT.......................................................... 20 2 4 0.25 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTTGCTAAGTTCCGA......................................................... 21 2 4 0.25 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCGA.......................................................... 20 2 4 0.25 1 0 1 0 0 0 0 0
...................................................................................................ATTCACAGTGGCTAAGTTC............................................................ 19 1 4 0.25 1 0 0 0 1 0 0 0
....................................................................................................TTCATAGTGGCTAAGTTCCGTT........................................................ 22 3 4 0.25 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGAGGCTAAGTTCCTC......................................................... 21 2 4 0.25 1 0 0 1 0 0 0 0
.....................................................................................................TCACAGTGCCTAAGTTCCGCATC...................................................... 23 3 5 0.20 1 0 0 0 0 1 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCCT.......................................................... 20 2 5 0.20 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGGTC............................................................ 18 1 5 0.20 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTGAGTTCCGCATC...................................................... 24 3 5 0.20 1 0 0 0 0 0 1 0
....................................................................................................TTCACAGTGGCTGAGTTCCGCAT....................................................... 23 3 5 0.20 1 0 1 0 0 0 0 0
....................................................................................................TTCGCAGTTGCTAAGTTCCGCA........................................................ 22 3 5 0.20 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGCCTAAGTTCCGCATC...................................................... 24 3 5 0.20 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCAT......................................................... 21 2 5 0.20 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAATTTCTGCCTC...................................................... 24 3 6 0.17 1 0 0 0 0 1 0 0
....................................................................................................CTCACAGTGGCTAAGTTC............................................................ 18 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCGT.......................................................... 20 2 6 0.17 1 0 1 0 0 0 0 0
....................................................................................................TTCACATTGGCTAAGTTCTGCCTC...................................................... 24 3 6 0.17 1 0 0 0 0 1 0 0
....................................................................................................TACACAGTGGCTAAGTTCCGAA........................................................ 22 3 6 0.17 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTTGCTAAGTTCTGCCTC...................................................... 24 3 6 0.17 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTGTCT....................................................... 23 3 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTACGTTCTGCCT....................................................... 23 3 7 0.14 1 0 1 0 0 0 0 0
....................................................................................................TTCCCAGTGGCTAAGTTC............................................................ 18 1 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTACTTTCCG.......................................................... 20 2 7 0.14 1 0 1 0 0 0 0 0
..................................................................................................AATTCACAGTGGCTAAGTTCC........................................................... 21 2 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAATTTCC........................................................... 19 1 7 0.14 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAACTTCTGCCTC...................................................... 24 3 8 0.13 1 0 0 0 0 1 0 0
....................................................................................................TTCACAGTGGCTAAGTTCTTCCA....................................................... 23 3 8 0.13 1 0 0 1 0 0 0 0
....................................................................................................TTCACCGTGGCTACGTTCTGCC........................................................ 22 3 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................TTCCCAGTGGCTAAGTTCTGCCA....................................................... 23 3 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................TTCCCAGTGGCTCAGTTCCG.......................................................... 20 2 8 0.13 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGGTCTGCCA....................................................... 23 3 9 0.11 1 1 0 0 0 0 0 0
....................................................................................................TCCACAGTGGCTAAGTTCCGAA........................................................ 22 3 9 0.11 1 0 0 1 0 0 0 0
...................................................................................................GTTCACAGTGGCTAAGTTAA........................................................... 20 2 19 0.11 2 1 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTTAGTTC............................................................ 18 1 10 0.10 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCA........................................................... 16 1 20 0.10 2 2 0 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTATC........................................................... 19 2 20 0.10 2 0 0 0 0 2 0 0
....................................................................................................TTCACAGTGGCTAAGTTAG........................................................... 19 2 20 0.10 2 0 1 1 0 0 0 0
..................................................................................................TGTTCACAGTGGCTAAGTTAA........................................................... 21 2 12 0.08 1 1 0 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTAAGTTCA........................................................... 19 2 14 0.07 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTCAGTTCTGCCA....................................................... 23 3 14 0.07 1 0 0 0 1 0 0 0
....................................................................................................TTCACAGTGGCTAAGTCCTGAC........................................................ 22 3 14 0.07 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCCGAA........................................................ 19 2 15 0.07 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCCGTT........................................................ 19 2 15 0.07 1 0 0 1 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTAAG.......................................................... 20 2 16 0.06 1 1 0 0 0 0 0 0
....................................................................................................TTCACAGGGGCTGCGTTCCGC......................................................... 21 3 16 0.06 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGGCTAAGTTCCACAG....................................................... 23 3 18 0.06 1 0 1 0 0 0 0 0
....................................................................................................TTCACAGTGACTAAGTTCCT.......................................................... 20 2 19 0.05 1 0 1 0 0 0 0 0
....................................................................................................TTCGCAGTGGCTGAGTTCC........................................................... 19 2 20 0.05 1 0 0 0 0 0 0 1
.....................................................................................................TCACAGTGGCTAAGTTA............................................................ 17 1 20 0.05 1 1 0 0 0 0 0 0
.......................................................................................................ACAGTGGCTAAGTTCTGCCT....................................................... 20 2 20 0.05 1 0 0 1 0 0 0 0
....................................................................................................TACACAGTGGCTAAGTTCA........................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0
....................................................................................................TTCACGGTGGCTAAGTTCCTT......................................................... 21 3 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

CCTACGGCGGGCCCCTGCCCCACCGTCTCCGGGGCTTCGGACACGGACCGGACTCCTCGTCCCGAATCGACGAACACTCGTCCCAGGTGTGGTTCAGCACAAGTGTCACCGATTCAAGGCGGGGGGTCCGGGAGTGGAGGAGGCCGGAACGGCGGACAGGGGACGACGGCGGACAGAC

*******************************************...((((((.((.((.(((((((((((((.(((((((.((...........)).)))))))))))))))))))).)).)).))))))....********************************************
Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
.CTACGGCGGGCACCTG................................................................................................................................................................. 16 1 14 0.07 1 1
.CTAAGGCGGGCCTCTGC................................................................................................................................................................ 17 2 20 0.05 1 1
.CTACGGCGGGGCCCT.................................................................................................................................................................. 15 1 20 0.05 1 1

Generated: 09/01/2015 at 12:15 PM