ID:

mml-mir-25

Coordinate:

chr3:47799251-47799334 -

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.3 -36.3 -36.3

Sense Strand Reads

GAGTTCAAAAGGGTCTGGTCTCCCTCACAGGACAGCTGAACTCCGGGACTGGCCAGTGTTGAGAGGCGGAGACTTGGGCAATTGCTGGACGCTGCCCTGGGCATTGCACTTGTCTCGGTCTGACAGTGCCGGCCCAACACTGCGGATGCTGGGGGGGGTGGGGGGCTCCTCTCCTGTTTTGTGA

************************************************..((((.((((((..((((.(((((..(((((((..((((........))))..))))).)).))))).))))..)))))).))))....**********************************************
Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle
SRR116840

epididymis
SRR116843

cortex
SRR116841

prostate
SRR116839

testes
SRR116845

epididymis
SRR116844

epididymis
.....................................................................................................CATTGCACTTGTCTCGGTCTGA............................................................. 22 0 1 8318.00 8318 3380 1792 1512 1236 398 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTG.............................................................. 21 0 1 1166.00 1166 493 343 174 127 29 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGT............................................................. 22 1 1 697.00 697 251 174 106 138 28 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTA............................................................. 22 1 1 596.00 596 9 227 180 134 46 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCT.................................................................................................. 23 0 1 425.00 425 85 102 107 47 84 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAA............................................................ 23 1 1 220.00 220 103 59 26 24 8 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCT............................................................... 20 0 1 201.00 201 60 89 24 25 3 0 0
...............................................................AGGCGGAGACTTGGGCAATTG.................................................................................................... 21 0 1 192.00 192 7 81 29 12 63 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAATC.......................................................... 25 3 1 164.00 164 0 0 0 0 0 110 54
.....................................................................................................CATTGCACTTGTCTCGGTCTGAT............................................................ 23 1 1 158.00 158 45 36 14 49 14 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTGA............................................................. 22 1 1 131.00 131 2 52 38 30 9 0 0
...............................................................AGGCGGAGACTTGGGCAATTGC................................................................................................... 22 0 1 106.00 106 12 12 22 16 44 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTT.............................................................. 21 1 1 95.00 95 1 51 18 21 4 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTT............................................................. 22 2 1 76.00 76 2 33 17 22 2 0 0
...............................................................AGGCGGAGACTTGGGCAATT..................................................................................................... 20 0 1 71.00 71 8 15 8 3 37 0 0
.....................................................................................................CATTGCACTTGTCTCGG.................................................................. 17 0 1 71.00 71 32 14 6 17 2 0 0
......................................................................................................ATTGCACTTGTCTCGGTCTGA............................................................. 21 0 1 50.00 50 32 10 2 4 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAA........................................................... 24 1 1 41.00 41 14 9 10 2 6 0 0
.....................................................................................................CATTGCACTTGTCTCTGTCTGA............................................................. 22 1 1 41.00 41 1 17 7 9 7 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTTA............................................................. 22 2 1 38.00 38 0 12 12 12 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCTGA............................................................. 22 1 1 38.00 38 26 5 4 3 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTC................................................................ 19 0 1 36.00 36 12 10 5 7 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGCCTGA............................................................. 22 1 1 33.00 33 15 6 5 6 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTATC............................................................ 23 2 1 32.00 32 0 0 0 0 0 19 13
.....................................................................................................CATTGCACTTGTCTCGGTCTGATATC......................................................... 26 3 1 32.00 32 0 0 0 0 0 26 6
.....................................................................................................CATTGCACTTGTCTCGGTCTGATC........................................................... 24 2 1 31.00 31 0 0 0 0 0 16 15
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAATC......................................................... 26 3 1 23.00 23 0 0 0 0 0 21 2
.....................................................................................................CATTGCACTTGTCTCGGTCTGTA............................................................ 23 2 1 21.00 21 4 7 7 3 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAT........................................................... 24 2 1 19.00 19 6 8 0 3 2 0 0
...............................................................AGGCGGAGACTTGGGCAATTGT................................................................................................... 22 1 1 17.00 17 6 3 2 1 5 0 0
...............................................................AGGCGGAGACTTGGGCAATTGA................................................................................................... 22 1 1 15.00 15 5 9 0 0 1 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTGA............................................................. 22 1 1 13.00 13 0 7 1 3 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGT................................................................. 18 0 1 13.00 13 6 5 2 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTG.............................................................. 21 1 1 13.00 13 0 7 4 1 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGATC......................................................... 26 3 1 12.00 12 0 0 0 0 0 11 1
.....................................................................................................CATTGCACTTGTCTCGTTCTGT............................................................. 22 2 1 11.00 11 0 4 2 3 2 0 0
.....................................................................................................CATTGCCCTTGTCTCGGTCTGA............................................................. 22 1 1 10.00 10 3 2 5 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTT................................................................................................. 24 1 1 10.00 10 2 1 2 2 3 0 0
.....................................................................................................CATTGCACTTGTCTCTGTCTG.............................................................. 21 1 1 10.00 10 1 4 1 1 3 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGC............................................................. 22 1 1 10.00 10 1 4 2 2 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGTT............................................................ 23 2 1 10.00 10 2 2 0 5 1 0 0
.....................................................................................................CATTGTACTTGTCTCGGTCTGA............................................................. 22 1 1 9.00 9 3 1 0 0 5 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATT........................................................... 24 2 1 9.00 9 1 2 1 4 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTA.............................................................. 21 1 1 9.00 9 1 2 5 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTAT............................................................ 23 2 1 9.00 9 0 3 1 4 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTAA............................................................. 22 1 1 8.00 8 1 3 2 2 0 0 0
.....................................................................................................CATTGCACTTGCCTCGGTCTGA............................................................. 22 1 1 8.00 8 1 2 4 0 1 0 0
.....................................................................................................CATTGCACTCGTCTCGGTCTGA............................................................. 22 1 1 7.00 7 4 0 2 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTATGA............................................................. 22 1 1 7.00 7 2 1 0 3 1 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCA.................................................................................................. 23 1 1 7.00 7 3 1 2 0 1 0 0
......................................................................................................ATTGCACTTGTCTCGGTCTG.............................................................. 20 0 1 7.00 7 6 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTAAA........................................................... 24 2 1 7.00 7 0 3 2 1 1 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTT.............................................................. 21 2 2 6.50 13 0 6 5 2 0 0 0
.....................................................................................................CATTGCACTTGACTCGGTCTGA............................................................. 22 1 1 6.00 6 2 0 4 0 0 0 0
.....................................................................................................CCTTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 6.00 6 4 0 1 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTAT............................................................. 22 2 1 6.00 6 0 3 2 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGTTTGA............................................................. 22 1 1 6.00 6 2 2 0 1 1 0 0
...................................................................................................AACATTGCACTTGTCTCGGTCTGA............................................................. 24 2 1 6.00 6 5 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTTGGTCTGA............................................................. 22 1 1 6.00 6 2 2 1 1 0 0 0
...............................................................AGGCGGAGACTTGGGCAAT...................................................................................................... 19 0 1 6.00 6 2 2 0 1 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTAA............................................................ 23 2 3 5.67 17 0 3 4 6 4 0 0
.....................................................................................................CATAGCACTTGTCTCGGTCTGA............................................................. 22 1 1 5.00 5 2 0 0 1 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAA.......................................................... 25 2 1 5.00 5 0 0 1 0 4 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTG.............................................................. 21 1 1 5.00 5 0 3 1 1 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTT.................................................................................................... 21 1 1 5.00 5 0 2 1 0 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATTT.......................................................... 25 3 1 5.00 5 0 0 0 5 0 0 0
......................................................................................................ATTGCACTTGTCTCGGTCTGT............................................................. 21 1 1 5.00 5 1 1 1 2 0 0 0
.....................................................................................................CACTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 1 1 0 1 1 0 0
.....................................................................................................CATTTCACTTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 0 2 0 2 0 0 0
.....................................................................................................CATTGCACTTGTCTCAGTCTGA............................................................. 22 1 1 4.00 4 1 1 0 2 0 0 0
.....................................................................................................CATTGCACTTGTTTCGGTCTGA............................................................. 22 1 1 4.00 4 1 2 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTA................................................................ 19 1 2 4.00 8 1 2 2 2 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGG............................................................. 22 1 1 4.00 4 1 2 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATA........................................................... 24 1 1 4.00 4 2 0 1 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAAC......................................................... 26 3 1 4.00 4 2 1 0 1 0 0 0
.....................................................................................................CATCGCACTTGTCTCGGTCTGA............................................................. 22 1 1 4.00 4 2 0 0 1 1 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTAA................................................................................................ 25 2 1 4.00 4 1 0 0 1 2 0 0
.....................................................................................................CATTGCACTTGTCTCGGTGTGA............................................................. 22 1 1 4.00 4 1 0 1 2 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCA............................................................... 20 1 1 4.00 4 1 1 1 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTAA............................................................... 20 2 4 3.25 13 2 7 3 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGTAA........................................................... 24 2 1 3.00 3 2 0 1 0 0 0 0
...............................................................AGGCGGAGACTTTGGCAATTGCT.................................................................................................. 23 1 1 3.00 3 0 0 0 0 3 0 0
.....................................................................................................CATTGCACTTGTCACGGTCTGA............................................................. 22 1 1 3.00 3 2 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTGAA............................................................ 23 2 1 3.00 3 0 2 0 1 0 0 0
.....................................................................................................CGTTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 3.00 3 2 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCCCGGTCTGA............................................................. 22 1 1 3.00 3 0 2 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTAT............................................................... 20 1 1 3.00 3 0 0 2 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGCCTG.............................................................. 21 1 1 3.00 3 0 1 1 1 0 0 0
...............TGGTCTCCCTCACAGGACAGCT................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................CATTGCACTTCTCTCGGTCTGA............................................................. 22 1 1 3.00 3 0 0 2 0 1 0 0
.....................................................................................................TATTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 3.00 3 1 0 1 1 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTAT................................................................................................ 25 2 1 3.00 3 0 1 1 0 1 0 0
.....................................................................................................CATTGCACTTGTCTAGGTCTGA............................................................. 22 1 1 3.00 3 0 1 1 0 1 0 0
......................................................................................................ATTGCACTTGTCTCGGTCTTA............................................................. 21 1 1 3.00 3 0 1 1 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATAATC........................................................ 27 3 1 3.00 3 0 0 0 0 0 3 0
.....................................................................................................CATTGCACTTGTCTCGGTCCG.............................................................. 21 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCT............................................................... 20 1 1 3.00 3 0 1 2 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGA................................................................. 18 1 3 2.33 7 1 0 0 6 0 0 0
...............................................................AGGCGGCGACTTGGGCAATTGC................................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0
.....................................................................................................CATTGCTCTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0
.....................................................................................................CATTGCGCTTGTCTCGGTCTG.............................................................. 21 1 1 2.00 2 0 1 1 0 0 0 0
.....................................................................................................CATTGCACTAGTCTCGGTCTG.............................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0
.....................................................................................................CATTTCACTTGTCTCGGTCTG.............................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0
...............................................................AGGCGGAGACGTGGGCAATT..................................................................................................... 20 1 1 2.00 2 0 0 0 0 2 0 0
.....................................................................................................CTTTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGTGCAATTGCT.................................................................................................. 23 1 1 2.00 2 0 1 1 0 0 0 0
.....................................................................................................CAATGCACTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 1 0 0 0 1 0 0
...............................................................AGGCGGAGACTTGGGCAATTGTT.................................................................................................. 23 1 1 2.00 2 1 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACTC.......................................................... 25 2 1 2.00 2 0 0 0 0 0 2 0
...............................................................AGGCGGAGACTTGGGCAATTGCTATC............................................................................................... 26 3 1 2.00 2 0 0 0 0 0 1 1
...............................................................AGGCGGAGACTTGGGCAATTTCT.................................................................................................. 23 1 1 2.00 2 0 0 1 0 1 0 0
....................................................................................................GCATTGCACTTGTCTCGGTCTGA............................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTCA............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGGCTCGGTCTG.............................................................. 21 1 1 2.00 2 1 0 0 1 0 0 0
...............................................................AGGCGGAGACCTGGGCAATTG.................................................................................................... 21 1 1 2.00 2 1 0 0 0 1 0 0
...............................................................AGGCGGGGACTTGGGCAATTG.................................................................................................... 21 1 1 2.00 2 0 0 1 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTT................................................................ 19 1 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCTGAT............................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCTG.............................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTA.................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCT............................................................... 20 1 1 2.00 2 1 0 1 0 0 0 0
.....................................................................................................CATTGCGCTTGTCTCGGTCTGA............................................................. 22 1 1 2.00 2 0 1 1 0 0 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCT............................................................... 20 1 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCAATC............................................................ 23 3 6 1.50 9 0 0 0 0 0 7 2
.....................................................................................................CATTGCACTTGTATCGGTCTGA............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTCT............................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTA................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGAA.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................ATTGCACTTGTCTTGGTCTG.............................................................. 20 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTCGTCTCGGTCTG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTATTA............................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTTT................................................................................................ 25 2 1 1.00 1 0 0 0 1 0 0 0
...............................................................AGGCGGAGCCTTGGGCGATTG.................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACTGGA........................................................ 27 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGACTGA............................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGTCCTGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATATT......................................................... 26 2 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGCCTTA............................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTGTCGGTCTGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCAGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................ATTGCACTTGTCTCGGT................................................................. 17 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGATTTGGGCAATTGCT.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTTCACTTGTCTCGGACTG.............................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGCGG......................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTCTCTCGGTCTG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACTTAGGCAATT..................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................AGGCGGAGACTTGAGCAATTGCT.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCACTTG.................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATGGAGC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACGATC........................................................ 27 3 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACTTTGCTCGGTCTGA............................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................ATTGCACTTGTCTCGG.................................................................. 16 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGCCTCGGTCTGAA............................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCCATTGCTA................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACCGAAC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCGCTTGTCTCGGTCTT.............................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGGAATTG.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCGCTTGTCTCGGTCTTA............................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAATA.......................................................... 25 3 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACATGTCTCGGTCTG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCATTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0
................................................................ATCGGAGACTTGGGCAATTGCT.................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCAA.............................................................. 21 2 3 1.00 3 1 1 1 0 0 0 0
.....................................................................................................CATTCCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCGCTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCTGGACGC............................................................................................ 29 0 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACGGAAC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCCCTTGTCTCGGTCTG.............................................................. 21 1 2 1.00 2 1 0 1 0 0 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTGAA............................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCCT................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTTTCGGTCTGAAA........................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
...............................................................AAGCGGAGACTTGGGCAATTGC................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAATC........................................................ 27 3 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACA........................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACGG.......................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAAC......................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTTTG.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAC.......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCAGTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCGGA............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGTCAATTGCT.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCAGTTGTCTCGGTATGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTATCGGTCTGAA............................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTTCACTTGTCTCGGCCTGA............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................CTTGTCTCGGTCTGA............................................................. 15 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TATTGCACTTGTCTCGGTCTTA............................................................. 22 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTATCTCGGTCTGA............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................ATTGTACTTGTCTCGGTCTGA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATAT.......................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGCCT............................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTAGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCTGT............................................................. 22 2 2 1.00 2 1 0 0 1 0 0 0
...............................................................AGGCGCAGACTTGGGCAATTG.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
.............................................................AAAGGCGGAGACTTGGGCAATTGCT.................................................................................................. 25 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGTAC........................................................... 24 3 1 1.00 1 0 0 0 0 0 1 0
...............................................................AGGCGGAGACTTGGGCAATA..................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................ATTGCACTTGTCTCGGTCTGAATC.......................................................... 24 3 1 1.00 1 0 0 0 0 0 1 0
...............................................................AGGCGGAGACTTGGGCAATTGCTGGA............................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCCGAA............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCACTTGCT.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
.............................................................AAAGGCGGAGACTTGGGCCATTG.................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACTTGTGCAATTGC................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CACTGCACTTTTCTCGGTCTGA............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGGAAC.......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................GATTGCACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTTGGTCTG.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGCAGACTTGGGCAATTGCT.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................AGGCGGAGACTCGGGCAATTG.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................GGGCGGAGACTTGTGCAATTGCT.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGACTCGATCTGA............................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGCCTGAA............................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGAATTGGGCAATTGCTAA................................................................................................ 25 3 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATCGCAT................................................................................................. 24 3 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTTTGAT............................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0
........................................................................................................TGCACTTGTCTCGGTCTGA............................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGAGCTC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATAA.......................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAC............................................................ 23 0 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGTACTGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTGTCGGACTGA............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAC........................................................... 24 2 1 1.00 1 0 0 0 0 0 0 1
...............................................................AGGCGTAGACTTGGGCAATTGCT.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCCCGGTCTGC............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCCCTTTTCTCGGTCTGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................AACATTGCACTCGTCTCGGTCTGA............................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTTTCGGTATGA............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTAGAGC......................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACCTGGGCAATT..................................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................TTGCACTTGTCTCGGTCTGA............................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTGT............................................................. 22 2 2 1.00 2 0 1 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGGCTGAA............................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCAA................................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGATAGAAC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATTTC................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAGGC.......................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAATT......................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGCGACTTGGGCAATTGCT.................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................TATCGCACTTGTCTCGGTCTGA............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................AGGCGCAGACTTGGGCAATTGC................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................AGGCGGAGAATTGGGCAATTG.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTTT............................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCAGTTGTCTCGGTCT............................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................AGGCGGAGACTTCGGCAATTG.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGCCTCGGTCTG.............................................................. 21 1 2 1.00 2 0 1 0 1 0 0 0
.....................................................................................................CATTGCACTCGTCTCGGTCTGAT............................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCATTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGACTGAAC....................................................... 28 3 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTGAT............................................................ 23 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATGT.................................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGAAAGAAC....................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
...........................................CGGGACTGGCCAGTGTTGAGCGGCA.................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................GGCGGAGACTTGGGCAATTGCT.................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCAGTCTGAC............................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGAACTTGTCTCGGTCTGA............................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................AGGCGGAGACTTGGGCAATTGCATT................................................................................................ 25 3 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................TATTGCACTTGTCTCGGTCTGAA............................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CATTTCACTTGTCTCGGTCTGAA............................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTTTGAA............................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACATTGCACTTGTCTCGGTCTG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGCCTGT............................................................. 22 2 4 0.75 3 0 0 0 3 0 0 0
.....................................................................................................CATTTCACTTTTCTCGGTCTGA............................................................. 22 2 3 0.67 2 1 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTATT........................................................... 24 3 3 0.67 2 0 1 0 1 0 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTTA............................................................. 22 2 3 0.67 2 0 1 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGCCTC.......................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1
.....................................................................................................CATTGCACTTGTATCGGTCTGT............................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTAAAA.......................................................... 25 3 2 0.50 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCGATC............................................................ 23 3 2 0.50 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGTCTAAA............................................................ 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTTTCGGTCTG.............................................................. 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTTTCTCGGTCTGC............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTTTCTCGTTCTGA............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
...............................................................AGGCGGAGACTTTGGCAATTTCT.................................................................................................. 23 2 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTAATC........................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0
.....................................................................................................CATTGCACTTGTCTCGGAAT............................................................... 20 2 4 0.50 2 0 2 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGG................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTTA............................................................... 20 2 4 0.50 2 0 2 0 0 0 0 0
...............................................................AGGCGTAGACTTGGGCAATTGT................................................................................................... 22 2 2 0.50 1 0 0 0 0 1 0 0
.....................................................................................................CATTGCCCTTGTCTCGGTCTGAAT........................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTGT............................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCTGTCTGT............................................................. 22 2 6 0.50 3 1 1 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCAGTCTGAA............................................................ 23 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCCCTTGTCTCGGTCT............................................................... 20 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTACACTTGTCTCGGTCT............................................................... 20 1 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTGAAT........................................................... 24 3 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTG............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCTGTCTGAT............................................................ 23 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCCCGGGCTGAA............................................................ 23 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................CATTGCCCTTGTCTCGTTCTGA............................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCCGTCTGT............................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0
...............................................................AGGCGGAGACTTGGGCAATAA.................................................................................................... 21 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGTTCTAA............................................................. 22 2 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................CATTTCACTTGTCTCGGTCTTA............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
............................................GGGACTGGCCAGTGTTGAG......................................................................................................................... 19 0 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCCCTTGTCTCTGTCTGA............................................................. 22 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................................CAATGCACTTGTCTCGGTCTTA............................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTATGT............................................................. 22 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTGTTT........................................................... 24 3 5 0.40 2 0 1 1 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCTGTCTGAAA........................................................... 24 2 3 0.33 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCTGTTTGA............................................................. 22 2 3 0.33 1 0 0 0 1 0 0 0
.....................................................................................................CATTGCACTTGTCTCTCTCTGA............................................................. 22 2 3 0.33 1 0 1 0 0 0 0 0
.....................................................................................................CATTGCACTTGTCTCGGTCTTTAA........................................................... 24 3 3 0.33 1 0 0 1 0 0 0 0

Anti-sense strand reads

CTCAAGTTTTCCCAGACCAGAGGGAGTGTCCTGTCGACTTGAGGCCCTGACCGGTCACAACTCTCCGCCTCTGAACCCGTTAACGACCTGCGACGGGACCCGTAACGTGAACAGAGCCAGACTGTCACGGCCGGGTTGTGACGCCTACGACCCCCCCCACCCCCCGAGGAGAGGACAAAACACT

**********************************************..((((.((((((..((((.(((((..(((((((..((((........))))..))))).)).))))).))))..)))))).))))....************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:21 PM