ID:

mml-mir-200a

Coordinate:

chr1:4385806-4385895 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.7 -42.6

Sense Strand Reads

CTGGACTTCCACAGCAGCCCCTGCCTGCCTTGAGGGATCCCATGTCCCTCCCGGGCCCCTGTGAGCATCTTACCGGACAGTGCTGGATTTCCCAGCTTGACTCTAACACTGTCTGGTAACGATGTTCAAAGGTGACCCACCGCTCGCCGGAGACCCCACCGAGGCACGTCCGGAGCTCCTACTCCAGAGA

**************************************************..(((..(((.(((((((((((((((((((((((((.....)))))...........)))))))))))).)))))))).)))...)))...*************************************************
Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle
SRR116845

epididymis
SRR116840

epididymis
SRR116841

prostate
SRR116844

epididymis
SRR116839

testes
SRR116843

cortex
.......................................................................................................TAACACTGTCTGGTAACGATGTT................................................................ 23 0 1 17371.00 17371 10122 0 4863 2301 0 77 8
.......................................................................................................TAACACTGTCTGGTAACGATGTTT............................................................... 24 1 1 10080.00 10080 4178 1 2010 3809 0 80 2
.......................................................................................................TAACACTGTCTGGTAACGATGTTATC............................................................. 26 3 1 7355.00 7355 0 7118 0 0 237 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGT................................................................. 22 0 1 3763.00 3763 2289 0 1007 454 0 11 2
.......................................................................................................TAACACTGTCTGGTAACGATGATC............................................................... 24 1 1 3531.00 3531 0 3139 0 0 392 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGATC............................................................... 24 2 2 2147.50 4295 0 3747 0 0 548 0 0
.......................................................................................................TAACACTGTCTGGTAACGATG.................................................................. 21 0 1 1307.00 1307 654 1 584 67 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTATC.............................................................. 25 3 1 1141.00 1141 0 1061 0 0 80 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTA................................................................ 23 1 1 849.00 849 560 5 182 101 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTA............................................................... 24 1 1 830.00 830 446 14 219 128 0 23 0
........................................................................................................AACACTGTCTGGTAACGATGTTT............................................................... 23 1 1 783.00 783 428 0 185 167 0 2 1
........................................................................................................AACACTGTCTGGTAACGATGTTA............................................................... 23 1 1 505.00 505 266 0 159 77 0 3 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAATC............................................................ 27 3 1 452.00 452 0 437 0 0 15 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGA................................................................. 22 1 1 394.00 394 231 7 139 17 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAA.............................................................. 25 1 1 352.00 352 168 3 113 43 2 23 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTATC............................................................ 27 3 1 330.00 330 0 320 0 0 10 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTT.............................................................. 25 2 1 257.00 257 44 0 19 192 0 2 0
.......................................................................................................TAACACTGTCTGGTAACGAT................................................................... 20 0 1 240.00 240 118 0 111 11 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTT................................................................ 22 0 1 217.00 217 114 0 87 16 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAA............................................................... 24 2 1 215.00 215 129 0 41 42 0 3 0
.......................................................................................................TAACACTGTCTGGTAACGATTTT................................................................ 23 1 1 139.00 139 14 0 78 46 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGGT................................................................ 23 1 1 105.00 105 89 0 8 8 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAA................................................................ 23 2 1 103.00 103 57 0 39 7 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTTC............................................................. 26 3 1 100.00 100 0 96 0 0 4 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTTTT............................................................... 24 2 1 95.00 95 9 0 31 54 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTC............................................................... 24 0 1 90.00 90 27 22 6 33 2 0 0
.......................................................................................................TAACACTGTCTGGTAACGA.................................................................... 19 0 1 83.00 83 45 6 26 6 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAT............................................................... 24 2 1 78.00 78 33 6 13 24 1 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAT.............................................................. 25 2 1 77.00 77 8 43 8 11 4 2 1
.......................................................................................................TAACACTGTCTGGTAACGATGGTT............................................................... 24 2 1 70.00 70 53 0 5 12 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATAATC............................................................... 24 2 1 68.00 68 0 61 0 0 7 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGTT................................................................ 23 1 1 67.00 67 45 0 12 10 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTATC............................................................. 25 3 1 66.00 66 0 64 0 0 2 0 0
.......................................................................................................TAACACTGTCTTGTAACGATGTTT............................................................... 24 2 1 64.00 64 0 0 17 47 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTAA.............................................................. 24 1 1 56.00 56 26 0 13 16 0 1 0
.......................................................................................................TAACACTGTCTTGTAACGATGTT................................................................ 23 1 1 56.00 56 5 0 33 17 0 0 1
.......................................................................................................TAACACTGTCTGGTAACGATATC................................................................ 23 2 1 56.00 56 0 46 0 0 10 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGTTT............................................................... 24 2 1 48.00 48 27 0 8 13 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTA.............................................................. 25 1 1 48.00 48 18 0 10 18 0 2 0
.......................................................................................................TAACACTGTCTGGTAACGATA.................................................................. 21 1 1 47.00 47 23 1 22 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTT................................................................. 22 1 1 44.00 44 5 0 27 12 0 0 0
.................................................................CATCTTACCGGACAGTGCTGGAATC.................................................................................................... 25 2 1 43.00 43 0 40 0 0 3 0 0
.......................................................................................................TAACACTGTCTTGTAACGATGATC............................................................... 24 2 1 36.00 36 0 33 0 0 3 0 0
.......................................................................................................TAACACTGTCTGGTAACTATGTT................................................................ 23 1 1 34.00 34 2 0 22 10 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTATT............................................................. 26 3 1 33.00 33 0 32 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGTT................................................................ 23 1 1 32.00 32 16 0 12 4 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTGTT................................................................ 23 1 1 28.00 28 12 0 12 3 0 1 0
.......................................................................................................TAACACTGTCTGGTAAAGATGT................................................................. 22 1 2 28.00 56 35 3 8 10 0 0 0
.......................................................................................................TAACACTGTCTGGCAACGATGTT................................................................ 23 1 1 28.00 28 11 0 13 4 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTC................................................................ 23 1 1 27.00 27 10 10 3 3 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTG............................................................... 24 1 1 26.00 26 21 0 3 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGATT............................................................... 24 2 1 25.00 25 4 15 0 3 3 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAT................................................................ 23 1 1 24.00 24 8 8 5 1 2 0 0
.......................................................................................................TAACACTGTCTGGTAACGATT.................................................................. 21 1 1 24.00 24 3 0 18 3 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAAA............................................................... 24 3 2 24.00 48 22 0 21 5 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTC.............................................................. 25 2 1 24.00 24 2 19 0 2 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAAA............................................................. 26 1 1 23.00 23 8 0 10 1 0 4 0
.......................................................................................................TAACACTGTCTGGTAACTATGTTT............................................................... 24 2 1 23.00 23 1 0 6 16 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATAATC............................................................... 24 3 5 20.00 100 0 91 0 0 9 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGTTT............................................................... 24 2 1 20.00 20 5 0 6 9 0 0 0
.......................................................................................................TAACACTGTTTGGTAACGATGTT................................................................ 23 1 1 19.00 19 12 0 3 4 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATTATC............................................................... 24 3 2 18.50 37 0 31 0 0 6 0 0
.......................................................................................................TAACACTGTCTGGTAACG..................................................................... 18 0 1 18.00 18 6 0 9 2 1 0 0
.................................................................CATCTTACCGGACAGTGCTGGATC..................................................................................................... 24 1 1 18.00 18 0 15 0 0 3 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGT................................................................. 22 1 1 18.00 18 12 0 6 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGATC............................................................... 23 1 1 18.00 18 0 15 0 0 3 0 0
.......................................................................................................TAACACTGTCTGGTAACGATCATC............................................................... 24 2 1 18.00 18 0 17 0 0 1 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTTT.............................................................. 24 2 1 17.00 17 6 0 3 8 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTAT.............................................................. 24 2 1 17.00 17 6 0 1 10 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAC.............................................................. 25 2 1 17.00 17 0 16 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGAAA.................................................................. 21 2 2 16.50 33 16 0 15 2 0 0 0
.......................................................................................................TAACACTGTCTGGGAACGATG.................................................................. 21 1 1 16.00 16 9 0 7 0 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGATGT................................................................. 22 1 1 16.00 16 2 0 10 4 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAAAA.............................................................. 25 3 1 16.00 16 14 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTAA............................................................. 26 1 1 15.00 15 11 0 1 3 0 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGGT................................................................ 23 2 1 15.00 15 12 0 3 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGT................................................................. 21 0 1 15.00 15 5 0 9 1 0 0 0
.......................................................................................................TAACACTTTCTGGTAACGATGTT................................................................ 23 1 1 15.00 15 5 0 4 6 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGGTGTT................................................................ 23 1 1 15.00 15 9 0 6 0 0 0 0
.......................................................................................................TAACACTGTCTGGCAACGATGTTT............................................................... 24 2 1 15.00 15 1 0 3 11 0 0 0
.......................................................................................................TAGCACTGTCTGGTAACGATGTT................................................................ 23 1 1 15.00 15 9 0 3 3 0 0 0
.......................................................................................................TAACACTGTCTGGTACCGATGATC............................................................... 24 2 1 15.00 15 0 11 0 0 4 0 0
.......................................................................................................TAACACTGTCTGGTACAGATGATC............................................................... 24 3 2 13.50 27 0 24 0 0 3 0 0
.......................................................................................................TAACACTGTCTGTTAACGATGTT................................................................ 23 1 1 13.00 13 1 0 7 5 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATCTT................................................................ 23 1 1 13.00 13 7 0 6 0 0 0 0
.......................................................................................................TAACACTGTTTGGTAAAGATGATC............................................................... 24 3 2 13.00 26 0 24 0 0 2 0 0
.......................................................................................................TAACACTGTCTGGTAATGATGTT................................................................ 23 1 1 13.00 13 7 0 6 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAATATGATC............................................................... 24 3 4 13.00 52 0 50 0 0 2 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGATC............................................................... 24 2 1 13.00 13 0 12 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTCTC............................................................. 26 2 1 12.00 12 0 12 0 0 0 0 0
.......................................................................................................TACCACTGTCTGGTAACGATGATC............................................................... 24 2 1 12.00 12 0 11 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACTATGT................................................................. 22 1 1 12.00 12 2 0 3 7 0 0 0
.................................................................CATCTTACCGGACAGTGCTG......................................................................................................... 20 0 1 12.00 12 4 0 7 0 0 1 0
.......................................................................................................TAACACTGTCTGGGAACGATGGTT............................................................... 24 3 1 11.00 11 9 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGCTC............................................................... 24 1 1 11.00 11 0 7 0 0 4 0 0
.......................................................................................................TAACACTGTCCGGTAACGATGTT................................................................ 23 1 1 11.00 11 9 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTCACGATGATC............................................................... 24 2 1 11.00 11 0 9 0 0 2 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAAT............................................................. 26 2 1 11.00 11 0 11 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAC...................................................................... 17 0 1 11.00 11 4 0 5 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTGATC............................................................... 24 2 1 11.00 11 0 10 0 0 1 0 0
.......................................................................................................TAACACTGTTTGGTAACGATGTTT............................................................... 24 2 1 11.00 11 3 0 1 7 0 0 0
.......................................................................................................TAACATTGTCTGGTAACGATGTT................................................................ 23 1 1 11.00 11 7 0 2 1 0 1 0
.......................................................................................................TAACACTGTCTGGGAAAGATGATC............................................................... 24 3 5 10.80 54 0 47 0 0 7 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTGT................................................................. 22 1 1 10.00 10 4 0 3 3 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTTT............................................................. 26 3 1 10.00 10 0 0 0 10 0 0 0
.......................................................................................................TAACCCTGTCTGGTAAAGATGATC............................................................... 24 3 2 10.00 20 0 19 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATAA................................................................. 22 2 2 9.50 19 11 0 7 1 0 0 0
.......................................................................................................TAACACTGTCTAGTAACGATGTT................................................................ 23 1 1 9.00 9 5 0 2 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAATGATGATC............................................................... 24 2 1 9.00 9 0 8 0 0 1 0 0
.......................................................................................................TAACACTGCCTGGTAACGATGTT................................................................ 23 1 1 9.00 9 7 0 2 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTTA.............................................................. 24 1 1 9.00 9 4 0 3 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTGTTT............................................................... 24 2 1 9.00 9 2 0 3 4 0 0 0
.......................................................................................................TAGCACTGTCTGGTAACGATGTTT............................................................... 24 2 1 9.00 9 4 0 4 1 0 0 0
.................................................................CATCTTACCGGACAGTGCTGGAAATC................................................................................................... 26 2 1 9.00 9 0 9 0 0 0 0 0
.......................................................................................................TAACACTTTCTGGTAAAGATGATC............................................................... 24 3 3 9.00 27 0 27 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACTATGATC............................................................... 24 2 1 9.00 9 0 4 0 0 5 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGCT................................................................ 23 1 1 9.00 9 6 0 2 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACTATG.................................................................. 21 1 1 8.00 8 0 0 8 0 0 0 0
.......................................................................................................TAACACCGTCTGGTAACGATGTT................................................................ 23 1 1 8.00 8 6 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAAACATGATC............................................................... 24 3 2 8.00 16 0 15 0 0 1 0 0
........................................................................................................AACACTGTCTGGTAACGATGTA................................................................ 22 1 1 8.00 8 6 0 2 0 0 0 0
.................................................................CATCTTACCGGACAGTGCTGGA....................................................................................................... 22 0 1 8.00 8 3 0 2 3 0 0 0
.......................................................................................................TAACGCTGTCTGGTAACGATGTT................................................................ 23 1 1 8.00 8 8 0 0 0 0 0 0
.......................................................................................................TAACACTTTCTGGTAACGATGTTT............................................................... 24 2 1 8.00 8 0 0 5 3 0 0 0
.......................................................................................................TAACACTGTCTGGTCACGATGTT................................................................ 23 1 1 8.00 8 7 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAG................................................................ 23 2 1 8.00 8 8 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTATC............................................................... 24 2 1 8.00 8 0 7 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGAAACGATGTT................................................................ 23 1 1 8.00 8 4 0 3 1 0 0 0
.........................................................................................................ACACTGTCTGGTAACGATGTT................................................................ 21 0 1 7.00 7 6 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATC.................................................................. 21 1 1 7.00 7 0 3 0 2 2 0 0
.......................................................................................................TAACACTGCCTGGTAACGATGTTT............................................................... 24 2 1 7.00 7 4 0 2 1 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTC............................................................... 23 0 1 7.00 7 3 0 3 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGAA................................................................... 20 1 1 7.00 7 2 0 5 0 0 0 0
.......................................................................................................TAACACTGTTTGGTAACGATGATC............................................................... 24 2 1 7.00 7 0 7 0 0 0 0 0
.......................................................................................................TAATACTGTCTGGTAACGATGTT................................................................ 23 1 1 7.00 7 4 0 1 0 0 2 0
........................................................................................................AACACTGTCTGGTAACGATTTTA............................................................... 23 2 1 7.00 7 0 0 5 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGGTC............................................................... 24 1 1 7.00 7 0 5 1 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTAATC........................................................... 28 3 1 7.00 7 0 6 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTCACGATGTTT............................................................... 24 2 1 7.00 7 6 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGACGTT................................................................ 23 1 1 7.00 7 3 0 3 1 0 0 0
........................................................................................................AACACTGTCTGGTAACGATG.................................................................. 20 0 1 7.00 7 3 0 4 0 0 0 0
.......................................................................................................TAACACTATCTGGTAACGATGTT................................................................ 23 1 1 7.00 7 5 0 2 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTAATC............................................................ 26 3 1 7.00 7 0 7 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAAA.............................................................. 25 2 1 7.00 7 3 0 2 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACTATTTT................................................................ 23 2 1 7.00 7 0 0 5 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGAT................................................................ 23 2 3 6.67 20 1 17 0 0 2 0 0
.......................................................................................................TAACACTGTCTCGTAACGATGTT................................................................ 23 1 1 6.00 6 2 0 3 1 0 0 0
.......................................................................................................TAACACTGTCTGGTGACGATGTTT............................................................... 24 2 1 6.00 6 4 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTAGA............................................................ 27 2 1 6.00 6 4 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGCTT............................................................... 24 2 1 6.00 6 5 0 0 0 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTCGGA............................................................ 27 2 1 6.00 6 4 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGC................................................................. 22 1 1 6.00 6 4 1 1 0 0 0 0
.......................................................................................................TGACACTGTCTGGTAACGATGTT................................................................ 23 1 1 6.00 6 4 0 1 1 0 0 0
.....................................................................................................AATAACACTGTCTGGTAACGATGTTT............................................................... 26 3 1 6.00 6 1 0 0 5 0 0 0
.......................................................................................................TAACCCTGTCTGGTAACGATGTT................................................................ 23 1 1 6.00 6 5 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGATGTA................................................................ 23 2 1 6.00 6 2 0 2 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGAGGATC............................................................... 24 3 3 6.00 18 0 18 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGCAACGATG.................................................................. 21 1 1 6.00 6 2 0 4 0 0 0 0
.......................................................................................................TAACCCTGTCTGGTAACGATGATC............................................................... 24 2 1 6.00 6 0 6 0 0 0 0 0
.......................................................................................................TCACACTGTCTGGTAACGATGTT................................................................ 23 1 1 6.00 6 6 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAGGA............................................................ 27 3 1 6.00 6 5 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGTTAACGATGTTT............................................................... 24 2 1 6.00 6 1 0 4 0 0 1 0
.......................................................................................................TAACACTGTCTGGGAACGAT................................................................... 20 1 1 6.00 6 1 0 5 0 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGATG.................................................................. 21 1 1 6.00 6 1 0 5 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTTTA............................................................... 24 2 1 6.00 6 1 0 4 1 0 0 0
.......................................................................................................TAACACTGTCCGGTAAAGATGATC............................................................... 24 3 2 5.50 11 0 11 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATAT................................................................. 22 1 1 5.00 5 4 1 0 0 0 0 0
.......................................................................................................TAACACTCTCTGGTAACGATGTTT............................................................... 24 2 1 5.00 5 2 0 1 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTCT............................................................... 24 2 1 5.00 5 4 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGCTAACGATGTT................................................................ 23 1 1 5.00 5 4 0 1 0 0 0 0
.......................................................................................................TAACACTGTTTGGTAACGATGT................................................................. 22 1 1 5.00 5 4 0 1 0 0 0 0
.....................................................................................................AATAACACTGTCTGGTAACGATGTT................................................................ 25 2 1 5.00 5 2 0 3 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTATA............................................................. 26 2 1 5.00 5 0 5 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGTTC............................................................... 24 1 1 5.00 5 0 4 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGCTC............................................................... 24 2 2 5.00 10 0 7 0 0 3 0 0
.......................................................................................................TAACACAGTCTGGTAACGATGTT................................................................ 23 1 1 5.00 5 4 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACAATGTT................................................................ 23 1 1 5.00 5 5 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAAGA............................................................ 27 2 1 5.00 5 3 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTGGCAACGATGATC............................................................... 24 2 1 5.00 5 0 4 0 0 1 0 0
.......................................................................................................TAACACTGTCCGGTAACGATGTTT............................................................... 24 2 1 5.00 5 3 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAGCGATGTT................................................................ 23 1 1 5.00 5 5 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGG................................................................. 22 1 2 5.00 10 9 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAGGATGATC............................................................... 24 2 1 5.00 5 0 5 0 0 0 0 0
.......................................................................................................TAACACTGTCTAGTAACGATGATC............................................................... 24 2 1 5.00 5 0 5 0 0 0 0 0
.......................................................................................................CAACACTGTCTGGTAACGATGTT................................................................ 23 1 1 5.00 5 3 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAGACA............................................................ 27 3 1 5.00 5 4 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGTTGTT................................................................ 23 1 1 5.00 5 4 0 1 0 0 0 0
.................................................................CATCTTACCGGACAGTGCTGGAGATC................................................................................................... 26 2 1 5.00 5 0 5 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTGGA............................................................ 27 3 1 5.00 5 3 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGGTGTTT............................................................... 24 2 1 5.00 5 4 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTTA................................................................ 23 2 1 5.00 5 1 0 2 1 0 1 0
........................................................................................................AACACTGTCTGGTAACGATTTTT............................................................... 23 2 2 5.00 10 0 0 6 4 0 0 0
.......................................................................................................TAACACTGTATGGTAACGATGTT................................................................ 23 1 1 5.00 5 3 0 1 1 0 0 0
.......................................................................................................TAACTCTGTCTGGTAACGATGTT................................................................ 23 1 1 5.00 5 3 0 1 1 0 0 0
.......................................................................................................TACCACTGTCTGGTAAAGATGATC............................................................... 24 3 3 4.67 14 0 13 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAA....................................................................... 16 0 2 4.50 9 7 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGATTTT................................................................ 23 2 2 4.50 9 0 0 7 2 0 0 0
......................................................................................................CTAACACTGTCTGGTAAAGATGATC............................................................... 25 2 2 4.50 9 0 8 0 0 1 0 0
.......................................................................................................TAACACTGTCTTGTAAAGATGATC............................................................... 24 3 4 4.25 17 0 14 0 0 3 0 0
.......................................................................................................TGACACTGTCTGGTAACGATGTTT............................................................... 24 2 1 4.00 4 3 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAAAA............................................................ 27 1 1 4.00 4 3 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGATAACGATGTTT............................................................... 24 2 1 4.00 4 1 0 1 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGTTGATC............................................................... 24 2 1 4.00 4 0 3 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGGTA............................................................... 24 2 1 4.00 4 2 0 0 2 0 0 0
.......................................................................................................TACCACTGTCTGGTAACGATGTTT............................................................... 24 2 1 4.00 4 3 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTCATC............................................................ 27 2 1 4.00 4 0 4 0 0 0 0 0
.......................................................................................................TAACACTTTCTGGTAACGATGT................................................................. 22 1 1 4.00 4 1 0 0 3 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTTTAA.............................................................. 25 2 1 4.00 4 2 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTACCGATGTT................................................................ 23 1 1 4.00 4 4 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTA................................................................. 22 2 1 4.00 4 0 0 3 1 0 0 0
.........................................................................................................ACACTGTCTGGTAACGATGTTAA.............................................................. 23 1 1 4.00 4 2 0 0 2 0 0 0
.......................................................................................................TAATACTGTCTGGTAACGATGATC............................................................... 24 2 1 4.00 4 0 3 0 0 1 0 0
.......................................................................................................TACCACTGTCTGGTAACGATGTT................................................................ 23 1 1 4.00 4 2 0 1 1 0 0 0
.......................................................................................................AAACACTGTCTGGTAACGATGTT................................................................ 23 1 1 4.00 4 3 0 1 0 0 0 0
.......................................................................................................TAACACTCTCTGGTAACGATGTT................................................................ 23 1 1 4.00 4 2 0 0 2 0 0 0
.......................................................................................................TCACACTGTCTGGTAACGATGTTT............................................................... 24 2 1 4.00 4 1 0 0 3 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGA.................................................................... 19 1 1 4.00 4 2 0 2 0 0 0 0
.......................................................................................................TAACATTGTCTGGTAACGATGATC............................................................... 24 2 1 4.00 4 0 4 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGGA................................................................ 23 2 2 3.50 7 7 0 0 0 0 0 0
.......................................................................................................TAATACTGCCTGGTAATGATGTTC............................................................... 24 3 4 3.50 14 0 13 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGACC............................................................... 24 2 2 3.50 7 0 6 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGATT............................................................... 24 3 7 3.43 24 0 23 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTCAAGATGATC............................................................... 24 3 3 3.33 10 0 8 0 0 2 0 0
.......................................................................................................TAACACTTTCTTGTAACGATGTT................................................................ 23 2 1 3.00 3 0 0 3 0 0 0 0
.......................................................................................................TAACACTATCTGGTAACGATGTTT............................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTCGTAACGATGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGACGTTT............................................................... 24 2 1 3.00 3 1 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTACCGATGT................................................................. 22 1 1 3.00 3 2 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTAT............................................................. 26 2 1 3.00 3 1 1 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGTATAGATGATC............................................................... 24 3 3 3.00 9 0 9 0 0 0 0 0
......................................................................................................CTAACACTGTCTGGTAACGATGTT................................................................ 24 0 1 3.00 3 2 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGAAACGATGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAAAACTGTCTGGTAACGATGTTT............................................................... 24 2 1 3.00 3 0 0 1 1 0 1 0
.......................................................................................................TAACACTGTCTGGTAACGAAGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAATGATGT................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTCA.............................................................. 25 0 1 3.00 3 1 0 0 0 0 2 0
.......................................................................................................TAACACTGTCTGTTAACGATTTT................................................................ 23 2 1 3.00 3 0 0 3 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACAATGTTT............................................................... 24 2 1 3.00 3 2 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTGAC............................................................. 26 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAGA............................................................. 26 2 1 3.00 3 2 0 0 0 0 1 0
.......................................................................................................TAACACTGTCTGCTAACGATA.................................................................. 21 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTCT.............................................................. 25 1 1 3.00 3 0 0 0 3 0 0 0
.......................................................................................................TAACACTGTCTGGTAACCATGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGCTAACGATGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTATGGTAACGATGT................................................................. 22 1 1 3.00 3 2 0 1 0 0 0 0
.........................................................................................................ACACTGTCTGGTAACGATGTTTT.............................................................. 23 2 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................ATAACACTGTCTGGTAACGATGTT................................................................ 24 1 1 3.00 3 2 0 1 0 0 0 0
.................................................................CATCTTACCGGACAGTGCTGG........................................................................................................ 21 0 1 3.00 3 1 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTGTC............................................................. 26 3 1 3.00 3 1 2 0 0 0 0 0
........................................................................................................AACACTGTCTGGGAACGATGTTT............................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGTTATC................................................................ 23 3 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGCCTGGTAACGATGATC............................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATTTTAT.............................................................. 25 3 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGACTGGTAACGATGTT................................................................ 23 1 1 3.00 3 2 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTCACGATGT................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGTTAACGATG.................................................................. 21 1 1 3.00 3 0 0 3 0 0 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGTTAA.............................................................. 25 2 1 3.00 3 1 0 1 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTGGTT............................................................... 24 3 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTTTCTGGTAACGATG.................................................................. 21 1 1 3.00 3 1 0 2 0 0 0 0
.......................................................................................................TAACCCTGTCTGGTAACGATGTTT............................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTATT.............................................................. 25 3 1 3.00 3 0 3 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAG............................................................... 24 2 1 3.00 3 2 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGGTGT................................................................. 22 1 1 3.00 3 1 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTAC............................................................... 24 1 1 3.00 3 2 1 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGCTGATC............................................................... 24 3 3 2.67 8 0 7 0 0 1 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTACC............................................................. 26 3 2 2.50 5 0 5 0 0 0 0 0
.................................................................CATCTTACCGGACAGTGCTGATC...................................................................................................... 23 3 2 2.50 5 0 5 0 0 0 0 0
.......................................................................................................TAACACTGTCTTGTAACGATGTTA............................................................... 24 2 2 2.50 5 0 0 2 3 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATGTA................................................................ 23 2 2 2.50 5 2 0 1 2 0 0 0
.......................................................................................................TAACACTGTCTGGGAACGATGG................................................................. 22 2 2 2.50 5 5 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGAAACGATGTTT............................................................... 24 2 2 2.50 5 2 0 0 3 0 0 0
.......................................................................................................TAACACTGTCTCGTAAAGATGATC............................................................... 24 3 3 2.33 7 0 7 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAAAGATCATC............................................................... 24 3 3 2.33 7 0 7 0 0 0 0 0
.......................................................................................................TAACACTGTCAGGTAACGATGTTAA.............................................................. 25 2 1 2.00 2 1 0 0 0 0 1 0
.................................................................CATCTTACCGGACAGTGCT.......................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTTTGGTAACGATGA................................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAGCACTGTCTGGTAACGATGTTA............................................................... 24 2 1 2.00 2 1 0 0 1 0 0 0
........................................................................................................AACACTGTCTGGTAACTATGTTT............................................................... 23 2 1 2.00 2 1 0 1 0 0 0 0
.......................................................................................................TAACAGTGTCTGGTAACGATGT................................................................. 22 1 1 2.00 2 0 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTGGTGACGATGT................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................CATCTTACAGGACAGTGCTGGAATC.................................................................................................... 25 3 1 2.00 2 0 2 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGCAACGATGGT................................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACATTGTCTGGTAACGATGTTT............................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTCTC.............................................................. 25 3 2 2.00 4 0 4 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGAAGTTT............................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTCAAA........................................................... 28 3 1 2.00 2 1 0 1 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTTGAAA............................................................ 26 1 1 2.00 2 0 0 0 2 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGAC................................................................ 23 2 2 2.00 4 0 4 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTGT............................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTATA.............................................................. 25 2 1 2.00 2 0 2 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTAAAAAA.......................................................... 29 3 1 2.00 2 1 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGTTAACGATGT................................................................. 22 1 1 2.00 2 1 0 0 1 0 0 0
.......................................................................................................TAACACAGTCTGGTAACGATGT................................................................. 22 1 1 2.00 2 1 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGATGTTTGAACG.......................................................... 29 3 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGCTG.................................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0
.......................................................................................................TAACACTGTCTGGGAACGA.................................................................... 19 1 1 2.00 2 0 2 0 0 0 0 0
.......................................................................................................TAACACTGTCTCGTAACGATGTTT............................................................... 24 2 1 2.00 2 1 0 0 1 0 0 0
.......................................................................................................TAACACTGTCTGGTCACGATG.................................................................. 21 1 1 2.00 2 1 0 1 0 0 0 0
........................................................................................................AACACTGTCTGGTAACGATGTAT............................................................... 23 2 1 2.00 2 0 0 2 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAACGGTGGT................................................................ 23 2 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAACACTGTCTGGTAGCGATGTTT............................................................... 24 2 1 2.00 2 1 0 0 1 0 0 0

Anti-sense strand reads

GACCTGAAGGTGTCGTCGGGGACGGACGGAACTCCCTAGGGTACAGGGAGGGCCCGGGGACACTCGTAGAATGGCCTGTCACGACCTAAAGGGTCGAACTGAGATTGTGACAGACCATTGCTACAAGTTTCCACTGGGTGGCGAGCGGCCTCTGGGGTGGCTCCGTGCAGGCCTCGAGGATGAGGTCTCT

*************************************************..(((..(((.(((((((((((((((((((((((((.....)))))...........)))))))))))).)))))))).)))...)))...**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis
...............................................................ACGTAGAATGGTCTGTCACGAC......................................................................................................... 22 2 2 0.50 1 1

Generated: 09/01/2015 at 12:02 PM