ID:

mml-mir-196b

Coordinate:

chr3:99636413-99636487 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.9 -34.9

Sense Strand Reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCTGTGCGGGCAGCACCAGAACTGGTCGGTGATTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTCATTACTTCAGTTGAAATCGTCTCCAGGTACTCTGCGCGCTGGGGTCGGGCCGGG

*************************************************((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))....**************************************
Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
SRR116845

epididymis
SRR116840

epididymis
SRR116841

prostate
SRR116842

seminal vesicle
SRR116843

cortex
SRR116839

testes
................................................................TAGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 0 1 2114.00 2114 1624 490 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 2 1 904.00 904 726 178 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTATC..................................................................................... 26 3 1 823.00 823 620 203 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAATC...................................................................................... 25 1 1 636.00 636 570 66 0 0 0 0 0
................................................................TAGGTAGTTTCATGTTGTTGGGATC...................................................................................... 25 1 2 371.00 742 602 140 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGG......................................................................................... 22 0 1 277.00 277 0 0 100 72 104 1 0
................................................................TAGGTAGTTTCCTGTTGTTGGGT........................................................................................ 23 1 1 260.00 260 0 0 119 75 62 4 0
................................................................TAGGTAGTTTCCTGTTGTTGGATC....................................................................................... 24 3 3 185.00 555 456 99 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGA......................................................................................... 22 1 1 165.00 165 2 0 78 42 42 1 0
................................................................TAGGTAGTTTCCTGTTGTTGGGA........................................................................................ 23 0 1 146.00 146 1 0 48 42 54 0 1
................................................................TAGGTAGTTTCCTGTTGTTGGGGATC..................................................................................... 26 3 1 119.00 119 101 18 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTATC...................................................................................... 25 1 1 95.00 95 82 13 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGG.......................................................................................... 21 0 1 72.00 72 0 0 31 17 23 1 0
................................................................TAGGTAGTTTCATGTTGTTGGAATC...................................................................................... 25 2 2 68.50 137 124 13 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAT........................................................................................ 23 2 1 51.00 51 2 2 21 10 15 1 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATATC.................................................................................... 27 3 1 50.00 50 37 13 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGT........................................................................................ 23 2 1 38.00 38 0 0 23 14 1 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGT......................................................................................... 22 1 1 37.00 37 0 0 17 11 8 1 0
................................................................TAGGTAGTTTCCTGTTGTTGGGGTC...................................................................................... 25 1 1 35.00 35 30 5 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTT....................................................................................... 24 1 1 33.00 33 0 0 12 17 4 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGG......................................................................................... 22 1 1 32.00 32 0 0 12 16 2 2 0
................................................................TAGGTAGTTTCCTGTTGTTGGAA........................................................................................ 23 1 1 29.00 29 3 0 15 6 5 0 0
................................................................TAGGTAGTTTCATGTTGTTGGTATC...................................................................................... 25 2 2 21.00 42 33 9 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAT....................................................................................... 24 0 1 20.00 20 7 4 4 4 0 1 0
................................................................TAGGTAGTTTCCTGTTGTTGGAAATC..................................................................................... 26 3 2 19.50 39 33 6 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTC...................................................................................... 25 1 1 19.00 19 15 4 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGA........................................................................................ 23 1 1 17.00 17 0 0 6 11 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTA....................................................................................... 24 2 1 16.00 16 3 4 6 1 2 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGATC...................................................................................... 25 1 1 16.00 16 14 2 0 0 0 0 0
...................................................................................................TCGACAGCACGACACTGCCTTCA..................................................... 23 0 1 15.00 15 0 0 6 5 3 1 0
................................................................TAGGTAGTTTCCTTTTGTTGGGATC...................................................................................... 25 1 1 14.00 14 12 2 0 0 0 0 0
................................................................TAGGTATTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 14.00 14 6 8 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGAATC..................................................................................... 26 3 1 13.00 13 11 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGCTC...................................................................................... 25 1 1 12.00 12 12 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTT...................................................................................... 25 2 2 10.50 21 1 0 6 11 3 0 0
................................................................TAGGTAGTTTCCTGTTGTTTG.......................................................................................... 21 1 1 10.00 10 0 0 7 3 0 0 0
................................................................TAGGTATTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 10.00 20 16 4 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAA....................................................................................... 24 1 1 10.00 10 3 0 0 7 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGG......................................................................................... 22 1 1 10.00 10 0 0 7 2 1 0 0
................................................................TATGTAGTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 9.00 18 17 1 0 0 0 0 0
................................................................TATGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 9.00 9 9 0 0 0 0 0 0
.................................................................AGGTAGTTTCATGTTGTTGGGATC...................................................................................... 24 1 2 8.50 17 16 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGAATC...................................................................................... 25 2 1 8.00 8 8 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGAATC..................................................................................... 26 3 1 8.00 8 7 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTT........................................................................................ 23 2 1 8.00 8 0 0 6 2 0 0 0
................................................................TAGGTAGTTTCATGTTGTTGGGGTC...................................................................................... 25 2 2 8.00 16 16 0 0 0 0 0 0
.................................................................AGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 24 0 1 8.00 8 6 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGAATC...................................................................................... 25 2 1 8.00 8 8 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGAA........................................................................................ 23 2 1 8.00 8 0 0 5 3 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGA......................................................................................... 22 2 3 7.33 22 0 0 12 10 0 0 0
................................................................TAGTTAGTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 7.00 14 14 0 0 0 0 0 0
................................................................TAGGTAGGTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 7.00 7 6 1 0 0 0 0 0
................................................................TAGTTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 7.00 7 7 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTGT........................................................................................ 23 2 2 6.50 13 0 0 11 2 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTAATC..................................................................................... 26 3 1 6.00 6 5 1 0 0 0 0 0
................................................................TAGGTAGTTTCATGTTTTTGGGATC...................................................................................... 25 2 2 6.00 12 12 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGATC...................................................................................... 25 1 1 5.00 5 4 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTTTTGTTGGAATC...................................................................................... 25 2 1 5.00 5 4 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTA........................................................................................ 23 1 1 5.00 5 0 0 3 1 1 0 0
................................................................TAGGTAGTTTCCTTTTGTTGGGAATC..................................................................................... 26 3 1 5.00 5 5 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTGA........................................................................................ 23 1 1 5.00 5 0 0 1 4 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTG......................................................................................... 22 1 1 5.00 5 0 0 3 2 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGACTC...................................................................................... 25 2 1 5.00 5 5 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGA........................................................................................ 23 1 1 5.00 5 0 0 3 2 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTA......................................................................................... 22 2 2 4.50 9 0 0 6 3 0 0 0
................................................................TAGGTAGTTTCATGTTGTTTGGATC...................................................................................... 25 2 2 4.50 9 9 0 0 0 0 0 0
................................................................TAGTTAGTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 4.00 4 4 0 0 0 0 0 0
................................................................TAGCTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 4.00 4 1 3 0 0 0 0 0
................................................................CAGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 4.00 4 4 0 0 0 0 0 0
....................................................................................................CGACAGCACGACACTGCCTTCA..................................................... 22 0 1 4.00 4 0 0 2 1 0 1 0
................................................................TAGGTAGGTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 4.00 4 4 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTAC...................................................................................... 25 2 1 4.00 4 3 1 0 0 0 0 0
...................................................................................................TCGACAGCACGACACTGCCTTC...................................................... 22 0 1 4.00 4 0 0 2 2 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGA.......................................................................................... 21 1 1 4.00 4 0 0 1 1 2 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAAT....................................................................................... 24 1 1 4.00 4 3 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGCATC..................................................................................... 26 3 3 3.67 11 9 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTC....................................................................................... 24 2 2 3.50 7 6 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATT...................................................................................... 25 1 2 3.50 7 4 0 0 2 1 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGT........................................................................................ 23 2 2 3.50 7 0 0 6 1 0 0 0
................................................................TAGGTAGTTTCATGTTGTTGGGTTC...................................................................................... 25 2 2 3.50 7 6 1 0 0 0 0 0
.................................................................TAGTAGTTTCATGTTGTTGGGATC...................................................................................... 24 3 3 3.00 9 9 0 0 0 0 0 0
................................................................TGGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 3.00 3 2 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAATT...................................................................................... 25 2 2 3.00 6 6 0 0 0 0 0 0
................................................................TAGGTATTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGATT....................................................................................... 24 2 1 3.00 3 2 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAAA...................................................................................... 25 2 1 3.00 3 0 0 0 1 2 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGACTC..................................................................................... 26 2 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGT............................................................................................. 18 0 1 3.00 3 2 0 0 0 1 0 0
................................................................TAGCTAGTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 3.00 6 6 0 0 0 0 0 0
.................................................................TAGTAGTTTCCTGTTGTTGGGATC...................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTG........................................................................................... 20 0 1 3.00 3 0 0 3 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGG........................................................................................ 23 1 1 3.00 3 0 0 1 0 2 0 0
..............................................CAGAACTGGTCGGTGATT............................................................................................................... 18 0 1 3.00 3 0 0 1 2 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTTT....................................................................................... 24 2 1 3.00 3 0 0 0 3 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAC....................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATA...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGCTGGGATC...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGCTAGTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 3.00 3 0 3 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGT.......................................................................................... 21 1 2 3.00 6 0 0 4 2 0 0 0
..................................................................TGTAGTTTCCTGTTGTTGGGATC...................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGCATC...................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGCAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 3.00 3 2 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTTT..................................................................................... 26 3 2 3.00 6 1 0 1 4 0 0 0
....................................................................TAGTTTCCTGTTGTTGGGATC...................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0
................................................................TAGGTACTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 2.50 5 3 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAAA....................................................................................... 24 2 2 2.50 5 0 0 2 1 2 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGC........................................................................................ 23 1 2 2.50 5 0 0 1 1 3 0 0
..................................................................TGTAGTTTCATGTTGTTGGGATC...................................................................................... 23 2 3 2.33 7 7 0 0 0 0 0 0
................................................................TAGGTAGTTTCATGTTGTTGGGCTC...................................................................................... 25 2 3 2.33 7 5 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTCTTGTTGGGAATC..................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGTTAGTTTCCTGTTGTTGGTATC...................................................................................... 25 2 1 2.00 2 0 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTCTTGTTGGGATC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTT............................................................................................ 19 0 1 2.00 2 0 0 1 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTTC..................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0
..................................................................GGTAGTTTCCTGTTGTTGGGATC...................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGGTTCATGTTGTTGGGATC...................................................................................... 25 2 3 2.00 6 5 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGAT....................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGTTAGTTTCATGTTGTTGGAATC...................................................................................... 25 3 2 2.00 4 4 0 0 0 0 0 0
.................................................................AGGTAGTTTCCTGTTGTTGGTATC...................................................................................... 24 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTAA........................................................................................ 23 2 1 2.00 2 0 0 1 1 0 0 0
....................................................................TAGTTTCATGTTGTTGGGATC...................................................................................... 21 1 2 2.00 4 4 0 0 0 0 0 0
................................................................TAGGTCGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................TCTAGTTTCCTGTTGTTGGGATC...................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAAC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGTA........................................................................................ 23 2 1 2.00 2 0 0 1 1 0 0 0
................................................................TAGGTAGTTTCTTGTTGTTGGGAATC..................................................................................... 26 3 2 2.00 4 4 0 0 0 0 0 0
................................................................TAGGTAGGTTCCTGTTGTTGGG......................................................................................... 22 1 1 2.00 2 0 0 0 0 2 0 0
................................................................CAGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTT........................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0 0
................................................................TAGGTAGCTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCTTGTTGTTGGGATC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGAT....................................................................................... 24 1 1 2.00 2 0 0 1 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTCTC...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TATGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 2 2.00 4 4 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTGGGTATC...................................................................................... 25 3 1 2.00 2 1 1 0 0 0 0 0
................................................................TAGATAGTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 2.00 2 1 1 0 0 0 0 0
................................................................TATGTAGTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTTC....................................................................................... 24 3 2 2.00 4 3 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTCGGAATC..................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTATCCTGTTGTTGGGATC...................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0 0
................................................................TAGGTAGTTTTATGTTGTTGGGATC...................................................................................... 25 2 2 2.00 4 4 0 0 0 0 0 0
...............................................................CTAGGTAGTTTCCTGTTGTTGGAATC...................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TATGTAGTTTCCTGTTGTTGGTATC...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
...................................................................TTAGTTTCCTGTTGTTGGAATC...................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGGTGGGATC...................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................TCGACAGCACGACACTGCCTT....................................................... 21 0 1 2.00 2 0 0 0 1 1 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAAT...................................................................................... 25 2 2 2.00 4 2 2 0 0 0 0 0
.................................................................AGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TAGGTATTTTCCTGTTGTTGGTATC...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................TACGTAGTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 1.50 3 3 0 0 0 0 0 0
................................................................TAGTTAGTTTCATGTTGTTGGTATC...................................................................................... 25 3 2 1.50 3 3 0 0 0 0 0 0
...............................................................TTAGGTAGTTTCATGTTGTTGGAATC...................................................................................... 26 2 2 1.50 3 2 1 0 0 0 0 0
.................................................................AGGTAGTTTCCTGTTGTTGGGTATC..................................................................................... 25 3 2 1.50 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTTTTGTTGGGT........................................................................................ 23 2 2 1.50 3 0 0 3 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAC........................................................................................ 23 2 2 1.50 3 2 0 0 1 0 0 0
................................................................TAGGTAGTTTCATGTTGGTGGGATC...................................................................................... 25 2 2 1.50 3 3 0 0 0 0 0 0
..................................................................CGTAGTTTCATGTTGTTGGGATC...................................................................................... 23 2 2 1.50 3 1 2 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTTGGA........................................................................................ 23 2 2 1.50 3 0 0 1 2 0 0 0
...................................................................TTAGTTTCATGTTGTTGGGATC...................................................................................... 22 2 3 1.33 4 3 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGT......................................................................................... 22 2 4 1.25 5 0 0 2 3 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTAT....................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TCGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGAA....................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGGTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TGGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGGTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTTTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCATGTTTTTGGTATC...................................................................................... 25 3 3 1.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGTT....................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTCCCTGTTGTTGGGT........................................................................................ 23 2 1 1.00 1 0 0 0 0 1 0 0
................................................................TAGGTAGCTTCCTGTTGTTGGGA........................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGAAA...................................................................................... 25 3 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTATTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTGGGAATC..................................................................................... 26 3 2 1.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTTTTGTTGGTATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTCCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGGTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGATTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................AAGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CTAGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAATTTCCTGTTTTTGGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGATTCCTGTTGTTGGTATC...................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGCTC...................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGAAAC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAAAC..................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTCGGG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TATGTAGTTTCCTGTTGTTTGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTATCCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................GTAGTTTCCTGTTGTTGGGAATC..................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGGTTCCTGTTGTTGGAA........................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGGTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGATAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................GTAGTTTCCTGTTGTTGGGATC...................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAATTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGGAA....................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCATTTTGCTGGGATC...................................................................................... 25 3 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................CGACAGCACGACACTGCCTTC...................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................TGAGGTAGTTTCCTGTTGTTGGAATC...................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................TCGACAGCACGACACTGCCTTCAT.................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCCGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TATCTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCTTGTTTTTGGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTCTCCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................TGAGGTAGTTTCCTGTTGTTGGAAT....................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTTGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTGTTGATC...................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGGTAC...................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
................................................................TGGGTAGTTTCCTGTTGTTGGG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGCGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGTTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................GTTTCCTGTTGTTGGGATC...................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGTGAT....................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGTTAGTTTCCTGTTGTTGGGA........................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTGGGGTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.................................................................AGGTAGTTTCCTGTTGTTGGGT........................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTGGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGGAGTTTCCTGTTGTTGGG......................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGGAC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTATTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGCAGTTTCCTGTTGTTGGGTTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGCTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................AGTTTCCTGTTGTTGGGATC...................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTCGG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTGCTGTTGTTGG.......................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTCTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTCTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGGTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGATTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAATCC..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTGGTTTCCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTCGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCATTTTGTTGGGATC...................................................................................... 25 2 2 1.00 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATCT..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAGC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTCCCTGTTGTTGGG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTATCCTGTTGTTGGG......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................CAGGTAGTTTCCTGTTGTTGGGA........................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGGAGTTTCCTGTTGTTGGGTT....................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCTTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTTTTGTTGGGTTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TTGGTAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGCTGTTGGT......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTATTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 3 1.00 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTGGGGA........................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTTGAAT....................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGCTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGAACC..................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................GGTAGTTTCCTGTTGTTGGAATC...................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..........................................GCACCAGAACTGGTCGGTGATT............................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTCCTGTCGTTGGGATC...................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTGGGA........................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................TCGACACCACGACACTGCCTTCT..................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................TCGACAGCACGACACTGCCTTA...................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGCTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TACGTAGTTTCCTGTTGTTGGTATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TCGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTGGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGAG........................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0 0
................................................................GAGGTAGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGGTTCCTGTTGGTGGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTTCTC................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGGT....................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTCTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTGGAATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTTCTGTTGTTTGGATC...................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTGGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATAC..................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTCGTTTCCTGTTGTTGGGAATC..................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGGAGGTTCCTGTTGTTGGGATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TATCTAGTTTCCTGTTGTTGGAATC...................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTTTTGGTATC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................TTTCCTGTTGTTGGGATC...................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGATTTATC.................................................................................. 29 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTCTC.................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGGAGTTTCCTGTTGTTGGGATC...................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTA...................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0
................................................................TAGGTAGGTTCCTGTTGTTGGGAT....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTGTC...................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................TAGGGAGTTTCCTGTTGTTGGTAT....................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................TAGTAGTTTCCTGTTGTTGGTATC...................................................................................... 24 3 4 0.75 3 3 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTAT...................................................................................... 25 3 7 0.71 5 2 1 2 0 0 0 0
................................................................TAAGTAGTTTCATGTTGTTGGTATC...................................................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCTTGTTGTTGGG......................................................................................... 22 1 3 0.67 2 0 0 0 0 2 0 0
................................................................TAGGTAGTTTCATGTTTTTGGAATC...................................................................................... 25 3 3 0.67 2 2 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGATC........................................................................................ 23 3 13 0.54 7 6 1 0 0 0 0 0
................................................................TAGGGAGTTTCATGTTGTTGGGATC...................................................................................... 25 2 2 0.50 1 0 1 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTG............................................................................................ 19 1 2 0.50 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCACGTTGTTGGGATC...................................................................................... 25 2 2 0.50 1 0 1 0 0 0 0 0
..............................................................AATAGGTAGTTTCCTGTTGTTGGGA........................................................................................ 25 2 2 0.50 1 0 0 1 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGTATT...................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCATGTTTTTTGGATC...................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGCTGTTGGA......................................................................................... 22 2 2 0.50 1 0 0 0 0 1 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTAA...................................................................................... 25 3 2 0.50 1 0 0 0 1 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTTA..................................................................................... 26 3 2 0.50 1 0 0 0 1 0 0 0
.................................................................AGGTAGTTTCATGTTGTTGGTATC...................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTTCCTGTTGTTGGGTTTTA.................................................................................... 27 3 2 0.50 1 0 0 0 0 1 0 0
................................................................TAGGTATTTTCATGTTCTTGGGATC...................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
..................................................................TGTAGTTTCCTGTTGTTGGAATC...................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
................................................................TAGGTAGTTCCATGTTGTTGGGATC...................................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGACACGCCCGTCGTGGTCTTGACCAGCCACTAAATCCATCAAAGGACAACAACCCTAGGTGGAAAGAGAGCTGTCGTGCTGTGACGGAAGTAATGAAGTCAACTTTAGCAGAGGTCCATGAGACGCGCGACCCCAGCCCGGCCC

**************************************((((((..((((((..(((((((.((.(((((((((((..........))))))))))).)).)))))))..))))))))))))....*************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:22 PM