ID:

mml-mir-18b

 Coordinate:

chrX:133484989-133485059 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-27.2 -27.2 -27.1

Sense Strand Reads

GCATAATTAAGTAGTTGATGCTTTTGAGCTGCTTCTTATAATGTGTCTCTTGTGTTAAGGTGCATCTAGTGCAGTTAGTGAAGCAGCTTAGAATCTACTGCCCTAAATGCCCCTTCTGGCACAGGCTGCCTAATATACAGCATTTTAAAAGTATGCCTTGAGTAGTCATTT

***********************************.........((..((((((((((((.((((.(((.(((((.((................))))))).))).)))).)))..)))))))))..)).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116841

prostate		 SRR116844

epididymis		 SRR116840

epididymis
.......................................................TAAGGTGCATCTAGTGCAGTTAGATC.......................................................................................... 26 3 1 6.00 6 6 0 0 0
.......................................................TAAGGTGCATCTAGTGCAGTTA.............................................................................................. 22 0 1 2.00 2 0 1 0 1
.........................................................AGGTGCATCTAGTGCAGTTATC............................................................................................ 22 2 1 2.00 2 0 0 2 0
.......................................................TAAGGTGCATCTAGTGCAGTT............................................................................................... 21 0 1 2.00 2 0 2 0 0
...........................................................................TAGTGAAGCAGCTTAGAATCT........................................................................... 21 0 1 1.00 1 0 1 0 0
.......................................................TAAGGTGCATCTAGTGCAGTTAGGTC.......................................................................................... 26 3 1 1.00 1 1 0 0 0
.......................................................TAAGGTGCATCTAGTGCAG................................................................................................. 19 0 2 0.50 1 0 0 0 1

Anti-sense strand reads

CGTATTAATTCATCAACTACGAAAACTCGACGAAGAATATTACACAGAGAACACAATTCCACGTAGATCACGTCAATCACTTCGTCGAATCTTAGATGACGGGATTTACGGGGAAGACCGTGTCCGACGGATTATATGTCGTAAAATTTTCATACGGAACTCATCAGTAAA

***********************************.........((..((((((((((((.((((.(((.(((((.((................))))))).))).)))).)))..)))))))))..)).......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:35 PM