ID:

mml-mir-186

 Coordinate:

chr1:74445581-74445666 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.2 -37.2 -37.2

Sense Strand Reads

TATAATTAAGGTTTACAGAACAGCCTTCATATTCTTCCCATTTTTTTCATTGCTTGTAACTTTCCAAAGAATTCTCCTTTTGGGCTTTCTGGTTTTATTTTAAGCCCAAAGGTGAATTTCTTGGGAAGTTTGAGCTAAATTCCTTCAACCAAAATATACAAGTGAAGAAAAAAAAATTTGTATTTA

*************************************************..(((((.((((((((((.((((((.(((((.((((((..............))))))))))).)))))).))))))))))))))).....********************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116843

cortex		 SRR116841

prostate		 SRR116839

testes
................................................................CAAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 1 1 25467.00 25467 20927 4540 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTATC................................................................................................ 26 3 1 8992.00 8992 6795 2197 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTT................................................................................................... 23 0 1 2443.00 2443 5 0 688 473 771 476 30
................................................................CAAAGAATTCTCCTTTTGGGCT.................................................................................................... 22 0 1 1349.00 1349 1 2 587 377 211 151 20
................................................................CAAAGAATTCTCCTTTTGGGCATC.................................................................................................. 24 2 2 1014.50 2029 1622 406 1 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCAATC................................................................................................. 25 2 1 809.00 809 632 177 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGG...................................................................................................... 20 0 1 704.00 704 0 0 318 279 45 57 5
................................................................CAAAGAATTCTCCTTTTGGGCTTTATC............................................................................................... 27 2 1 610.00 610 501 109 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGATC................................................................................................... 23 2 1 610.00 610 459 151 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 534.00 534 428 106 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCAT................................................................................................... 23 1 1 411.00 411 9 3 169 115 55 53 7
................................................................CAAAGAATTCTCCTTTTGGGCA.................................................................................................... 22 1 1 313.00 313 2 0 138 97 38 37 1
................................................................CAAAGAATTCTCCTTTTGGGCTA................................................................................................... 23 1 1 293.00 293 66 11 105 60 27 21 3
.................................................................AAAGAATTCTCCTTTTGGGCTATC................................................................................................. 24 1 1 243.00 243 204 39 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTAT.................................................................................................. 24 1 1 224.00 224 157 24 17 12 9 3 2
................................................................CAAAGAATTCTCCTTTTGGGC..................................................................................................... 21 0 1 211.00 211 1 1 91 70 19 24 5
.................................................................AAAGAATTCTCCTTTTGGGCTTATC................................................................................................ 25 3 1 178.00 178 118 60 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGG....................................................................................................... 19 0 1 165.00 165 0 0 77 50 18 18 2
................................................................CAAAGAATTCTCCTTTTGGTCTT................................................................................................... 23 1 1 160.00 160 0 0 3 47 53 57 0
................................................................CAAAGAATTCTCCTTTTGGGCTTAATC............................................................................................... 27 3 1 142.00 142 126 16 0 0 0 0 0
................................................................CAAAGACTTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 141.00 141 106 35 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTT................................................................................................... 22 0 1 140.00 140 0 0 42 22 55 19 2
................................................................CAAAGAATTCTCCTTTTGTGCTT................................................................................................... 23 1 1 125.00 125 0 0 0 27 52 42 4
................................................................CAAAGAATTCTCCTTTTGGGCTTC.................................................................................................. 24 1 1 123.00 123 99 24 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCAA................................................................................................... 23 2 1 107.00 107 0 2 51 25 20 8 1
................................................................CAAAGAATTCTCCTTTTTGGCTT................................................................................................... 23 1 1 100.00 100 0 0 1 40 36 23 0
................................................................CAAAGAATTCTCCTTTTGGGCTTAT................................................................................................. 25 2 1 98.00 98 65 22 1 3 5 2 0
................................................................CAAAGAATTCTCCTTTTGGGCTTT.................................................................................................. 24 0 1 96.00 96 0 0 21 23 21 29 2
................................................................CAAAGAATTCTCCTTTTGGGCTCTC................................................................................................. 25 1 1 95.00 95 73 22 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCT.................................................................................................... 22 1 1 84.00 84 0 0 1 32 21 29 1
................................................................CAAAGAATTCTCCTTTTGGGCTATT................................................................................................. 25 2 1 82.00 82 69 13 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGGCTATC................................................................................................. 25 2 1 75.00 75 68 7 0 0 0 0 0
................................................................CCAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 71.00 71 64 7 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCT.................................................................................................... 21 0 1 62.00 62 0 0 27 11 11 13 0
................................................................CAAAGAATTCTCCTTTTGGGCTTA.................................................................................................. 24 1 1 60.00 60 7 3 13 14 13 9 1
................................................................CAAAGAATTCTCCTTTTGGTCT.................................................................................................... 22 1 1 57.00 57 0 0 1 25 22 8 1
................................................................CAAAGAATTCTCCCTTTGGGCTATC................................................................................................. 25 2 1 56.00 56 49 7 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTATC................................................................................................. 25 2 1 55.00 55 50 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGA..................................................................................................... 21 1 1 53.00 53 0 0 32 14 1 6 0
................................................................CAAAGAATTCTCCTTTTGGCTTATC................................................................................................. 25 3 2 45.50 91 69 22 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTATC................................................................................................. 25 2 1 43.00 43 38 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTTCTT................................................................................................... 23 2 1 39.00 39 0 0 0 12 16 11 0
................................................................CAAAGAATTCTCCTTTTTGGCT.................................................................................................... 22 1 1 39.00 39 0 0 1 23 7 7 1
................................................................CAAAGAATTCTCCTTTTGGGCCATC................................................................................................. 25 2 1 39.00 39 33 6 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGG...................................................................................................... 21 0 1 39.00 39 0 0 15 16 6 2 0
................................................................CAACGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 38.00 38 31 7 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTC................................................................................................. 25 0 1 37.00 37 26 11 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTG...................................................................................................... 20 1 1 35.00 35 0 0 0 17 5 13 0
................................................................CAAGGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 34.00 34 28 6 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTATT................................................................................................ 26 2 1 33.00 33 27 5 0 0 0 1 0
................................................................CAAAGAATTCTCCTCTTGGGCTATC................................................................................................. 25 2 1 29.00 29 23 6 0 0 0 0 0
................................................................CAAAGCATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 28.00 28 20 8 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGGA..................................................................................................... 22 1 1 28.00 28 0 0 10 9 3 6 0
................................................................TAAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 27.00 27 24 3 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTAA.................................................................................................. 24 2 1 27.00 27 3 0 8 9 2 3 2
................................................................CAAAGAATTCTCCTTTTTGGCAT................................................................................................... 23 2 1 24.00 24 0 0 1 7 6 9 1
................................................................CAAAGAATTCTCCTTTTGGGCTTCTC................................................................................................ 26 3 1 23.00 23 14 9 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGTCTT................................................................................................... 23 2 1 22.00 22 0 0 0 6 1 14 1
...............................................................CCAAAGAATTCTCCTTTTGGGCT.................................................................................................... 23 0 1 22.00 22 0 0 8 7 3 4 0
................................................................CAAAGAATTCTCCTTTTGGGCTTAA................................................................................................. 25 2 1 20.00 20 0 0 7 5 4 4 0
.................................................................CAAGAATTCTCCTTTTGGGCTATC................................................................................................. 24 2 1 20.00 20 14 6 0 0 0 0 0
................................................................AAAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 19.00 19 14 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTATATC............................................................................................... 27 3 1 19.00 19 18 1 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTA................................................................................................... 22 1 1 19.00 19 5 0 9 2 2 0 1
................................................................CAGAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 18.00 18 16 2 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTTTATC............................................................................................... 26 2 1 18.00 18 13 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATT.................................................................................................. 24 1 1 18.00 18 3 3 4 4 2 2 0
................................................................CAAAGAATTCCCCTTTTGGGCTATC................................................................................................. 25 2 1 18.00 18 14 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTG................................................................................................... 23 1 1 17.00 17 0 0 8 1 4 3 1
................................................................CACAGAATTCTCCTTTTGGGCAATC................................................................................................. 25 3 1 16.00 16 14 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGG...................................................................................................... 20 1 1 16.00 16 0 0 0 10 3 2 1
................................................................CAAAGAATTCTCCTTTTGGGTTATC................................................................................................. 25 2 1 16.00 16 12 4 0 0 0 0 0
................................................................CAAAGATTTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 16.00 16 12 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTC..................................................................................................... 21 1 1 15.00 15 0 0 1 11 2 1 0
................................................................CAAAGAATTCTCTTTTTGGGCTATC................................................................................................. 25 2 1 15.00 15 13 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCAT................................................................................................... 23 2 1 15.00 15 0 0 3 6 0 6 0
................................................................CAAGGAATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 15.00 15 0 0 1 0 12 2 0
................................................................CAAAGAATTCTCCTTTTGGGCTATA................................................................................................. 25 2 1 13.00 13 9 2 0 2 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGAAATC................................................................................................. 25 3 2 13.00 26 18 8 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTAGGCTATC................................................................................................. 25 2 1 13.00 13 13 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGT...................................................................................................... 20 1 3 12.67 38 0 0 2 26 2 8 0
..................................................................CAGAATTCTCCTTTTGGGCTATC................................................................................................. 23 2 1 12.00 12 10 2 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGTCTT................................................................................................... 22 1 1 12.00 12 0 0 0 0 9 2 1
................................................................CAAAGAATTCTCCTTTCGGGCTATC................................................................................................. 25 2 1 12.00 12 10 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTA................................................................................................... 23 2 1 12.00 12 0 0 0 9 0 3 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTTC................................................................................................ 26 2 1 11.00 11 7 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGA...................................................................................................... 20 1 6 10.33 62 0 0 27 20 6 9 0
................................................................CAAAGAATTCTCCTTTTGGGCTACC................................................................................................. 25 2 1 10.00 10 8 2 0 0 0 0 0
................................................................CAAAGAATTCTCCCTTTGGGCTT................................................................................................... 23 1 1 10.00 10 0 0 3 1 2 4 0
................................................................CAAAGAATTCTCCTTTTCGGCTATC................................................................................................. 25 2 1 10.00 10 8 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTTT.................................................................................................. 24 1 1 10.00 10 0 0 0 2 1 7 0
................................................................CAAAGAATTCTCCTTTTGGGCATTC................................................................................................. 25 1 1 10.00 10 5 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTCTGGGCTATC................................................................................................. 25 2 1 10.00 10 9 1 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCAATC................................................................................................. 24 2 1 10.00 10 10 0 0 0 0 0 0
................................................................CAAAGAGTTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 10.00 10 9 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTC................................................................................................... 23 1 1 9.00 9 4 1 2 0 2 0 0
................................................................CAAAGAATTGTCCTTTTGGGCTATC................................................................................................. 25 2 1 9.00 9 8 1 0 0 0 0 0
................................................................CAAATAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 9.00 9 5 4 0 0 0 0 0
................................................................CAAAGAATCCTCCTTTTGGGCTATC................................................................................................. 25 2 1 9.00 9 7 2 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGGCTCTC................................................................................................. 25 2 1 9.00 9 5 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCA.................................................................................................... 22 2 2 8.50 17 0 0 1 7 1 8 0
................................................................CAAAGAATTCTCCTTTTGGGCGATC................................................................................................. 25 2 1 8.00 8 6 2 0 0 0 0 0
..................................................................AAGAATTCTCCTTTTGGGCTATC................................................................................................. 23 1 1 8.00 8 4 4 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTTTTC................................................................................................ 25 2 1 8.00 8 8 0 0 0 0 0 0
................................................................CAAAGGATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 8.00 8 6 2 0 0 0 0 0
................................................................CTAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 8.00 8 7 1 0 0 0 0 0
................................................................CAGAGAATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 8.00 8 0 0 1 0 7 0 0
................................................................CACAGAATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 8.00 8 0 0 6 2 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCAT................................................................................................... 22 1 2 7.50 15 0 0 5 1 4 5 0
................................................................CAAAGAATTCTCCTTTTGGGCTATCT................................................................................................ 26 1 1 7.00 7 6 1 0 0 0 0 0
................................................................GAAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 7.00 7 5 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTGTC................................................................................................. 25 1 1 7.00 7 5 2 0 0 0 0 0
................................................................CAAAAAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 7.00 7 2 5 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGCCTATC................................................................................................. 25 2 1 7.00 7 3 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTGT.................................................................................................. 24 1 1 7.00 7 0 0 0 5 1 1 0
................................................................CAATGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 7.00 7 6 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCAT................................................................................................... 23 2 2 7.00 14 0 0 0 7 2 3 2
................................................................CAAAGAATTCTCCTTTTGGGCTTTAT................................................................................................ 26 1 1 7.00 7 4 2 0 1 0 0 0
................................................................CAAAGAATTCTCCTTTTGCGCTATC................................................................................................. 25 2 1 6.00 6 3 3 0 0 0 0 0
................................................................CAAAGAATTTTCCTTTTGGGCTATC................................................................................................. 25 2 1 6.00 6 5 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTATA................................................................................................ 26 3 1 6.00 6 2 3 0 0 0 0 1
.................................................................AAAGAATTCTCCTTTTGGGCTTT.................................................................................................. 23 0 1 6.00 6 0 0 1 2 1 2 0
................................................................CAAAGAACTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 6.00 6 4 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTA................................................................................................. 25 1 1 6.00 6 0 0 2 0 3 1 0
................................................................CAAAGAATTCTCCTTTTGGGATATC................................................................................................. 25 2 1 6.00 6 5 1 0 0 0 0 0
................................................................CAAACAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 6.00 6 6 0 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGG....................................................................................................... 20 0 1 6.00 6 0 0 1 1 3 0 1
................................................................CATAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 6.00 6 3 3 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGGCATC.................................................................................................. 25 2 1 6.00 6 2 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGGCTTTATC............................................................................................... 27 3 1 6.00 6 5 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTG........................................................................................................ 18 0 1 6.00 6 0 0 1 1 2 2 0
...............................................................CCAAAGAATTCTCCTTTTGGGC..................................................................................................... 22 0 1 6.00 6 0 0 1 4 1 0 0
................................................................CACAGACTTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 6.00 6 2 4 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTTA.................................................................................................. 23 1 1 6.00 6 0 0 1 0 2 3 0
................................................................CAAAGAATTCTCCTTTTGGGTATC.................................................................................................. 24 3 6 5.67 34 24 10 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTAC.................................................................................................. 24 2 1 5.00 5 5 0 0 0 0 0 0
................................................................TAAAGAATTCTCCTTTTGGGCT.................................................................................................... 22 1 1 5.00 5 0 0 0 3 2 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTTT.................................................................................................. 24 1 1 5.00 5 0 0 0 1 2 2 0
................................................................CAAAGAATTCTCCTTTTGGACTATC................................................................................................. 25 2 1 5.00 5 3 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGC..................................................................................................... 21 1 1 5.00 5 0 0 0 2 3 0 0
................................................................CAAAGAATTCTCCATTTGGGCTATC................................................................................................. 25 2 1 5.00 5 4 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCACTC................................................................................................. 25 2 2 5.00 10 8 2 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGTGCT.................................................................................................... 23 1 1 5.00 5 0 0 0 1 4 0 0
................................................................CAAAGACTTCTCCTTTTGGGCTTTATC............................................................................................... 27 3 1 5.00 5 3 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTGTATC............................................................................................... 27 3 1 5.00 5 5 0 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTAT.................................................................................................. 23 1 1 5.00 5 0 0 2 2 0 1 0
................................................................CAAAGTATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 5.00 5 5 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGAGCTATC................................................................................................. 25 2 1 5.00 5 5 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCCTC.................................................................................................. 24 2 1 5.00 5 1 4 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTTGCTT................................................................................................... 23 2 5 4.60 23 0 0 0 8 9 5 1
................................................................CACAGAATTCTCCTTTTGGGCTTTATC............................................................................................... 27 3 2 4.50 9 8 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCATC.................................................................................................. 24 3 5 4.40 22 19 3 0 0 0 0 0
................................................................CAAAGAATTCTCCCTTTTGGCTATC................................................................................................. 25 3 1 4.00 4 4 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTAT.................................................................................................. 24 2 1 4.00 4 1 0 0 2 0 1 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTT................................................................................................. 25 1 1 4.00 4 0 0 1 1 0 2 0
................................................................CAAAGAATTCTCCTTTGGGGCTATC................................................................................................. 25 2 1 4.00 4 3 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATA.................................................................................................. 24 2 1 4.00 4 1 0 1 2 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTAC................................................................................................. 25 1 1 4.00 4 4 0 0 0 0 0 0
................................................................CAACGACTTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 4.00 4 4 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGGCTTT.................................................................................................. 24 1 1 4.00 4 0 0 0 1 2 1 0
................................................................CAAAGAATTCACCTTTTGGGCTATC................................................................................................. 25 2 1 4.00 4 4 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGTCT.................................................................................................... 22 2 2 4.00 8 0 0 0 7 0 1 0
................................................................CAAAGAATACTCCTTTTGGGCTATC................................................................................................. 25 2 1 4.00 4 4 0 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGTGCTT................................................................................................... 22 1 1 4.00 4 0 0 0 0 3 1 0
................................................................CAAAGAATTCTCATTTTGGGCTATC................................................................................................. 25 2 1 4.00 4 4 0 0 0 0 0 0
..............................................................AACAAAGAATTCTCCTTTTGGGCTT................................................................................................... 25 2 1 4.00 4 0 0 0 2 1 1 0
.................................................................AAAGAATTCTCCTTTTGGTCT.................................................................................................... 21 1 1 4.00 4 0 0 0 0 0 4 0
................................................................CGAAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 2 1 4.00 4 4 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGT..................................................................................................... 21 1 1 4.00 4 0 0 1 2 0 1 0
...............................................................CCAAAGAATTCTCCTTTTGTG...................................................................................................... 21 1 1 4.00 4 0 0 0 1 0 2 1
................................................................CAAAGAATTCTCCTTTTGGTCA.................................................................................................... 22 2 3 3.67 11 0 0 0 6 3 2 0
.................................................................AAAGAATTCTCCTTTTGGGCA.................................................................................................... 21 1 2 3.50 7 0 0 4 3 0 0 0
................................................................CAAAGAATTCTCCTTTTTGGCA.................................................................................................... 22 2 2 3.50 7 0 0 0 4 0 3 0
................................................................CACAGAATTCTCCTTTTGTGCTATC................................................................................................. 25 3 2 3.50 7 7 0 0 0 0 0 0
................................................................CAAAGAATTCTACTTTTGGGCTATC................................................................................................. 25 2 1 3.00 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTGA................................................................................................. 25 2 1 3.00 3 0 0 0 2 0 1 0
...............................................................CCAAAGAATTCTCCTTTTGGGCTT................................................................................................... 24 0 1 3.00 3 0 0 0 1 1 1 0
.................................................................AAAGAATTCTCCTTTTGTGCT.................................................................................................... 21 1 1 3.00 3 0 0 0 2 0 1 0
................................................................CAAAGAATTCTGCTTTTGGGCTT................................................................................................... 23 1 1 3.00 3 0 0 1 0 2 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTAG.................................................................................................. 24 2 1 3.00 3 0 0 2 1 0 0 0
................................................................CAAAGAATTCTCCTATTGGGCTATC................................................................................................. 25 2 1 3.00 3 2 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTTT................................................................................................ 26 1 1 3.00 3 0 0 0 0 0 3 0
................................................................CAAAGAATTCTCCTTTTGGGAA.................................................................................................... 22 2 6 3.00 18 0 0 10 6 0 2 0
...............................................................CCAAAGAATTCTCCTTTTGGGCA.................................................................................................... 23 1 1 3.00 3 0 0 0 2 1 0 0
................................................................CAAAGAGTTCTCCTTTTGGGCTT................................................................................................... 23 1 1 3.00 3 0 0 1 0 1 1 0
................................................................CAAAGAATTCTACTTTTGGGCTT................................................................................................... 23 1 1 3.00 3 0 0 1 0 1 1 0
................................................................CAAAGAATTCTCCTTTTCGGCT.................................................................................................... 22 1 1 3.00 3 0 0 0 1 2 0 0
................................................................CAAAGAATTCTCCGTTTGGGCTATC................................................................................................. 25 2 1 3.00 3 2 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTATTC................................................................................................ 26 3 2 3.00 6 6 0 0 0 0 0 0
................................................................CAAAGAATTCTCCCTTTGGGCT.................................................................................................... 22 1 1 3.00 3 0 0 1 0 0 2 0
...............................................................CCAAAGAATTCTCCTTTTTGGCT.................................................................................................... 23 1 1 3.00 3 0 0 0 1 1 1 0
................................................................CACACAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 3.00 3 3 0 0 0 0 0 0
.................................................................AACGAATTCTCCTTTTGGGCTATC................................................................................................. 24 2 1 3.00 3 2 1 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGT...................................................................................................... 21 1 1 3.00 3 0 0 0 2 1 0 0
................................................................CAGGGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 2 3.00 6 6 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTTTATC............................................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGTC..................................................................................................... 22 1 1 3.00 3 0 0 0 2 1 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATTATC............................................................................................... 27 3 1 3.00 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTTGGCTA................................................................................................... 23 2 3 3.00 9 0 0 0 6 1 2 0
................................................................CAAAGAATTCTCCTTTTGGGCTTGTC................................................................................................ 26 3 1 3.00 3 2 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTA................................................................................................... 23 2 3 3.00 9 0 0 0 5 1 2 1
................................................................CAACGAATTCTCCTTTTGGGCAATC................................................................................................. 25 3 1 3.00 3 1 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTTATT............................................................................................... 27 2 1 3.00 3 2 0 1 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTTTC................................................................................................. 25 1 1 3.00 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGAGCTT................................................................................................... 23 1 1 3.00 3 0 0 0 1 2 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTATG................................................................................................. 25 2 1 3.00 3 2 0 0 0 0 1 0
................................................................CAAAGAATTCTCCTTTTGTTCTTT.................................................................................................. 24 2 1 3.00 3 0 0 0 0 1 2 0
.................................................................AAAGAATTCTCCTTTTGGGCTTAATC............................................................................................... 26 3 2 2.50 5 3 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTTCT.................................................................................................... 22 2 6 2.17 13 0 0 0 6 4 3 0
................................................................CAAAGAATTCCCCTTTTGGGCT.................................................................................................... 22 1 1 2.00 2 0 0 2 0 0 0 0
................................................................CAAAGAATTCTCTTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 0 0 2 0 0
.................................................................AAAGAATTCTCCTTTTGGGCTGT.................................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTATAA................................................................................................ 26 3 1 2.00 2 0 0 1 0 0 1 0
................................................................TAAGGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGGCTA................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATCCTCCTTTTGGGCTAT.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCGTC.................................................................................................. 24 2 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGACTTCTCCTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 1 0 1 0 0 0 0
................................................................CAAAGAATTCTCGTTTTGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGGATTCTCCTTTTGGGCT.................................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0
................................................................CAAAGAATTCTCCTTTTGGGCCTTATC............................................................................................... 27 3 1 2.00 2 0 2 0 0 0 0 0
................................................................CAAAGAATTCTCCCCTTGGGCTATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTACC................................................................................................ 26 2 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGTT.................................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0
................................................................CACAGCATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTGTGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCCTTTGGG...................................................................................................... 20 1 1 2.00 2 0 0 1 0 0 1 0
................................................................CACCGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGCATTCTCCTTTTGGGCTAT.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
.................................................................AAAGCATTCTCCTTTTGGGCTATC................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATG.................................................................................................. 24 2 1 2.00 2 1 0 1 0 0 0 0
................................................................CCAAGAATTCTCCTTTTGGGCTTTATC............................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATGCTCCTTTTGGGCTATC................................................................................................. 25 2 1 2.00 2 1 1 0 0 0 0 0
................................................................CACAGATTTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTAT.................................................................................................. 24 2 1 2.00 2 0 0 0 1 0 1 0
................................................................CAAAGAACTCTCCTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 1 0 1 0 0
................................................................CAAAGAATTCTCCTTCTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 1 0 0 1 0
................................................................CAAAGAATTCTCCTTTTGGTCTTTT................................................................................................. 25 2 1 2.00 2 0 0 0 0 0 2 0
................................................................CAAAGAATTCTCCTTTTTGGC..................................................................................................... 21 1 1 2.00 2 0 0 0 0 1 1 0
................................................................CAAAGAATTCTCCTTTTGGGCAGTC................................................................................................. 25 2 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTGGGGCTTTATC............................................................................................... 27 3 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGAATACTCCTTTTGGGCAATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTCGGT................................................................................................ 26 3 1 2.00 2 0 0 2 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTTG.................................................................................................. 24 1 1 2.00 2 0 0 0 1 1 0 0
................................................................CAAAGGATTCTCCTTTTGGGCTTC.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGCGCTTTATC............................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTACTTTTGGGCT.................................................................................................... 22 1 1 2.00 2 0 0 1 1 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTTC.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CCAAGAATTCTCCTTTTGGGCAATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTTGG...................................................................................................... 21 1 1 2.00 2 0 0 0 1 1 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTTTATC............................................................................................... 27 3 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTGTTGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CGAAGAATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0 0
.......................................................................................................GCCCAAAGGTGAATTTCTTGGG............................................................. 22 0 1 2.00 2 0 0 0 2 0 0 0
................................................................CAACGAATTCTCCTTTTGGGCATC.................................................................................................. 24 3 2 2.00 4 3 1 0 0 0 0 0
................................................................CTAAGAATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 0 0 1 1 0
................................................................CAAAGAATTCTCCTTTTGGGCTAAC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTTCTTTTGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGTGCTTA.................................................................................................. 24 2 1 2.00 2 0 0 0 1 0 1 0
................................................................CAAAGAATTCTCCTTTTTGGCTAT.................................................................................................. 24 2 1 2.00 2 1 0 0 0 0 1 0
................................................................CCACGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTATGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCGCCTTTTGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAGAGAATTCTCCTTTTGGGCT.................................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0
................................................................CAAAGAATTCTCCTTTCGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 0 1 0 1 0
................................................................CAAAGAATTCTCATTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 2 0 0 0 0
................................................................CAAAGACTTCTCCTTTTGGGCTATT................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTCTTA.................................................................................................. 24 2 1 2.00 2 0 0 0 0 0 2 0
................................................................TACAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTCGGGCAATC................................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGGAATC.................................................................................................. 25 3 5 2.00 10 5 5 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGGCTTC.................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CAAAGAATCCTCCTTTTGGGCT.................................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATAC................................................................................................. 25 2 1 2.00 2 0 2 0 0 0 0 0
................................................................CAAAGACTTCTCCTTTTGGGCTAT.................................................................................................. 24 2 1 2.00 2 1 1 0 0 0 0 0
................................................................CAAAGCATTCTCCTTTTGGGCTT................................................................................................... 23 1 1 2.00 2 0 0 0 1 0 0 1
................................................................CAAAGAATTCTCCTTTAGGGCTATC................................................................................................. 25 2 1 2.00 2 2 0 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGG...................................................................................................... 20 1 2 2.00 4 0 0 3 1 0 0 0
................................................................CAAAGAATTCTCCCTTTGGGCATC.................................................................................................. 24 3 5 1.80 9 7 2 0 0 0 0 0
................................................................CAAAGACTTCTCCTTTTGGGCATC.................................................................................................. 24 3 4 1.75 7 6 1 0 0 0 0 0
.................................................................AAAGAATTCTCCTTTTGGGCAA................................................................................................... 22 2 3 1.67 5 0 0 5 0 0 0 0
................................................................CCCAGAATTCTCCTTTTGGGCTATC................................................................................................. 25 3 2 1.50 3 3 0 0 0 0 0 0
................................................................CACAGAATTCTCCTTTTGGGCTTAT................................................................................................. 25 3 2 1.50 3 0 3 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGGAA.................................................................................................... 23 2 2 1.50 3 0 0 1 1 0 1 0
................................................................CAGGGAATTCTCCTTTTGGGCTT................................................................................................... 23 2 2 1.50 3 0 0 0 0 3 0 0
................................................................CAAAGAATTCTCCTTTTGGGTC.................................................................................................... 22 2 2 1.50 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTCGGGCATC.................................................................................................. 24 3 2 1.50 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGCTATT.................................................................................................. 24 3 2 1.50 3 3 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCTAAA................................................................................................. 25 3 5 1.40 7 0 0 2 4 1 0 0
.................................................................AAAGAATTCTCCTTTTGGGATC................................................................................................... 22 2 3 1.33 4 2 2 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCACC.................................................................................................. 24 3 3 1.33 4 3 1 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGAATC................................................................................................... 23 3 20 1.20 24 14 10 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGTA..................................................................................................... 21 2 5 1.20 6 0 0 0 3 0 3 0
.................................................................AAAGAATTCTCCTTTTGG....................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................AAGAATTCTCCTTTTGGGCTTATC................................................................................................ 24 3 2 1.00 2 2 0 0 0 0 0 0
...............................................................CCAAAGAATTCTCCTTTTGGTCT.................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
................................................................CAAAGAACTCTCCTTTTGGGCTCTC................................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0 0
................................................................CAAAGAATTCTCCTTTTGGGCATATT................................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0 0
................................................................GAAAGACTTCTCCTTTTGGGCTATC................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0
................................................................CAAGGAATTCTCCTTTTGGGCTTTATC............................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
................................................................CAAGGAATTCTCCTTTTGGGCATC.................................................................................................. 24 3 7 1.00 7 3 4 0 0 0 0 0

Anti-sense strand reads

ATATTAATTCCAAATGTCTTGTCGGAAGTATAAGAAGGGTAAAAAAAGTAACGAACATTGAAAGGTTTCTTAAGAGGAAAACCCGAAAGACCAAAATAAAATTCGGGTTTCCACTTAAAGAACCCTTCAAACTCGATTTAAGGAAGTTGGTTTTATATGTTCACTTCTTTTTTTTTAAACATAAAT

**********************************************..(((((.((((((((((.((((((.(((((.((((((..............))))))))))).)))))).))))))))))))))).....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:02 PM