ID:

mml-mir-184

 Coordinate:

chr7:57747191-57747274 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.2

Sense Strand Reads

CGTCCGTTTACATCTTGTCCTGCAAAGCTTCATCAAAACTTCTTTGCCGGTCAGTCACGTCCCCTTATCACTTTTCCAGCCCAGCTTTATGACTGTAAGTGTTGGACGGAGAACTGATAAGGGTAGGTGATTGACACTCACAGCCTCCGGAACCCCCCGCACCGCCTGCACCTGCATGATGGAG

***********************************......((.((...(((((((((...(((((((((.((((((...((((((((((....))))).)))))..)))))).)))))))))...)))))))))...)).))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis		 SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116845

epididymis		 SRR116841

prostate		 SRR116839

testes
......................................................................................................TGGACGGAGAACTGATAAGGGCATC......................................................... 25 3 1 2028.00 2028 2025 0 0 0 3 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGATC.......................................................... 24 3 1 1692.00 1692 1690 0 0 0 2 0 0
......................................................................................................TGGACGGAGAACTGATAAGGATC........................................................... 23 2 1 328.00 328 328 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTATC......................................................... 25 2 1 168.00 168 168 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAATC......................................................... 25 3 2 78.00 156 156 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCTC.......................................................... 24 3 1 19.00 19 19 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGT............................................................ 22 0 1 12.00 12 0 10 0 1 0 0 1
......................................................................................................TGGACGGAGAACTGATAAGGGC............................................................ 22 1 1 9.00 9 1 2 4 2 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGATT.......................................................... 24 3 1 7.00 7 7 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCA........................................................... 23 1 1 6.00 6 4 0 1 1 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGACC.......................................................... 24 3 1 6.00 6 6 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCAT.......................................................... 24 2 1 6.00 6 6 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGA............................................................ 22 1 1 6.00 6 5 1 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAT........................................................... 23 2 1 5.00 5 5 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCAA.......................................................... 24 2 1 5.00 5 0 1 3 1 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCATT......................................................... 25 3 1 5.00 5 5 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAATC.............................................................. 20 2 1 4.00 4 4 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGGATC......................................................... 25 3 1 4.00 4 4 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGAATC........................................................... 23 3 2 3.50 7 7 0 0 0 0 0 0
.....................................................................................................CTGGACGGAGAACTGATAAGGGTATC......................................................... 26 3 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTTC.......................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
.......................................................................................................GGACGGAGAACTGATAAGGGCATC......................................................... 24 3 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCACC......................................................... 25 3 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGG............................................................. 21 0 1 3.00 3 0 1 0 0 0 2 0
.......................................................................................................GGACGGAGAACTGATAAGGGATC.......................................................... 23 3 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGCTC........................................................... 23 2 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGGTC.......................................................... 24 3 1 3.00 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGATT........................................................... 23 2 2 2.50 5 5 0 0 0 0 0 0
......................................................................................................TGCACGGAGAACTGATAAGGATC........................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGG.............................................................. 20 0 1 2.00 2 0 2 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGACC........................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCAAT......................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGATA.......................................................... 24 3 2 1.50 3 3 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTT........................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCATA......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAATGGC............................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................TGGACGGAGAACTGTTAAGGGT............................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................GGACGGAGAACTGATAAGGGAATC......................................................... 24 3 2 1.00 2 2 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTAT.......................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAAC.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAATT......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGTAGAACTGATAAGGGC............................................................ 22 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGTGTAA.......................................................... 24 2 1 1.00 1 0 0 0 0 0 0 1
......................................................................................................TGGACGGAGAACTGATACGGATC........................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCCC.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAAT.......................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGATAACTGATAAGGGCA........................................................... 23 2 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGCTT........................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGCTAAGGATC........................................................... 23 3 2 1.00 2 2 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTATT......................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGCACTGATAAGGGC............................................................ 22 2 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................CTGGACGGAGAACTGATAAGGATC........................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTAATC........................................................ 26 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCAAC......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................CGGACGGAGAACTGATAAGGATC........................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATACGGGTATC......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGAGC.......................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGGTAAGGGTATC......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGTGT............................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGCGG.......................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTCTC......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGTGTATC......................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGGGTC........................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGATAACTGATAAGGGC............................................................ 22 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATATC............................................................... 19 2 12 0.58 7 7 0 0 0 0 0 0
......................................................................................................TGGATGGAGAACTGATAAGGATC........................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAGACTC........................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGCACTGATAA................................................................ 18 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATACGGGAT........................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................TGGGCGGAGAACTGATAAGGCTC........................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................ACGGAGAACTGATAAGGGC............................................................ 19 1 2 0.50 1 0 0 1 0 0 0 0
......................................................................................................TGGACGGAGAACTGACAAGGGTATC......................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................TGGTCGGAGAACTGATAAGGCTC........................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATCAGGATC........................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................GACGGAGAACTGATAAGGGCATC......................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGCTAAGGATT........................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................TGGACGGAGAACTGATAAATC............................................................. 21 3 20 0.25 5 5 0 0 0 0 0 0
......................................................................................................TTGACGTAGAACTGATAAGGGC............................................................ 22 3 6 0.17 1 0 1 0 0 0 0 0

Anti-sense strand reads

GCAGGCAAATGTAGAACAGGACGTTTCGAAGTAGTTTTGAAGAAACGGCCAGTCAGTGCAGGGGAATAGTGAAAAGGTCGGGTCGAAATACTGACATTCACAACCTGCCTCTTGACTATTCCCATCCACTAACTGTGAGTGTCGGAGGCCTTGGGGGGCGTGGCGGACGTGGACGTACTACCTC

***********************************......((.((...(((((((((...(((((((((.((((((...((((((((((....))))).)))))..)))))).)))))))))...)))))))))...)).))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:27 PM