ID:

mml-mir-181b-1

 Coordinate:

chr1:172257403-172257512 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.2 -32.7
mature

  1. mml-mir-181b-1  chr1:172257438-172257461 +
  2. mml-mir-181b-2  chr15:103149890-103149913 -
star

Sense Strand Reads

ATTCGTTGAAGACAGGAAACCAAAGGTGGACACACCAGGACTTTCTCTTCCCTGTGCAGAGATTATTTTTTAAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGAACTGTGTAGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCCGCTTTTTGCTGTCACAATCAACAGATATTCCATCTTTGAAAGATGTGTTCAGAG

**********************************************************************.....(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....)))))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116839

testes		 SRR116845

epididymis		 SRR116844

epididymis
.....................................................................................AACATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 0 2 1647.00 3294 2440 477 180 157 40 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGT...................................................................................................... 23 0 2 793.00 1586 1174 244 85 66 17 0 0
.....................................................................................AACATTCATTGCTGTCGGT.......................................................................................................... 19 0 2 605.00 1210 920 168 62 60 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTG......................................................................................................... 20 0 2 488.00 976 630 241 56 47 1 0 1
.....................................................................................AACATTCATTGCTGTCGGTGGG....................................................................................................... 22 0 2 191.50 383 283 57 23 17 3 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGA...................................................................................................... 23 1 2 191.00 382 304 42 22 14 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGT..................................................................................................... 24 1 2 151.00 302 177 15 94 15 1 0 0
....................................................................................CAACATTCATTGCTGTCGGTG......................................................................................................... 21 0 2 146.00 292 200 68 15 8 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTT......................................................................................................... 20 1 2 127.50 255 197 42 4 12 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTA......................................................................................................... 20 1 2 98.00 196 160 22 8 6 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGTT..................................................................................................... 24 1 2 85.00 170 140 20 0 8 2 0 0
.....................................................................................AACATTCATTGCTGTCGGTGT........................................................................................................ 21 1 2 64.50 129 93 24 5 6 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTA..................................................................................................... 24 1 2 58.00 116 75 24 7 9 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGT...................................................................................................... 23 1 2 57.50 115 101 12 0 2 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGG...................................................................................................... 23 1 2 43.50 87 62 6 14 5 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCA................................................................. 20 0 1 40.00 40 31 6 1 1 1 0 0
....................................................................................CAACATTCATTGCTGTCGGT.......................................................................................................... 20 0 2 39.50 79 58 16 4 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTA.................................................................................................... 25 1 2 35.50 71 46 11 10 3 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAA.................................................................................................... 25 2 2 31.00 62 35 21 6 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGA....................................................................................................... 22 1 2 29.00 58 49 6 3 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGA.......................................................................................................... 19 1 2 29.00 58 43 12 3 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGG....................................................................................................... 23 0 2 27.50 55 47 4 2 2 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTT..................................................................................................... 23 0 2 26.00 52 42 4 2 2 2 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAT..................................................................................................... 24 1 2 19.00 38 23 8 7 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGG....................................................................................................... 22 1 2 16.50 33 23 7 0 2 1 0 0
.............................................................................................................................CTCACTGAACAATGAATGC.................................................................. 19 0 1 16.00 16 12 2 1 0 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTAA........................................................................................................ 21 2 3 16.00 48 42 4 1 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAT................................................................................................... 26 2 3 15.00 45 19 12 5 7 2 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGA...................................................................................................... 23 2 2 14.50 29 28 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAA...................................................................................................... 23 2 2 13.50 27 24 1 0 2 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGGT..................................................................................................... 24 2 2 12.50 25 4 1 20 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTT......................................................................................................... 21 1 2 12.00 24 16 8 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTT...................................................................................................... 23 1 2 11.50 23 20 3 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTTT..................................................................................................... 24 1 2 11.00 22 20 1 0 1 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTA......................................................................................................... 21 1 2 11.00 22 19 1 1 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGTT..................................................................................................... 24 1 2 10.50 21 11 7 0 2 1 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGGT...................................................................................................... 24 0 2 10.50 21 16 2 0 3 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGT...................................................................................................... 22 0 2 9.50 19 8 5 6 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTT..................................................................................................... 24 1 2 9.00 18 8 0 10 0 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCAA................................................................ 21 0 1 9.00 9 6 1 1 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGAA......................................................................................................... 20 2 6 8.83 53 48 3 2 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTGTT..................................................................................................... 24 1 2 8.00 16 12 3 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGG........................................................................................................ 21 0 2 8.00 16 11 3 2 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTT........................................................................................................ 21 2 3 8.00 24 22 0 0 2 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGAA..................................................................................................... 24 2 2 7.00 14 11 2 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGG........................................................................................................... 18 0 2 6.50 13 9 3 1 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGT........................................................................................................ 22 1 2 6.50 13 11 1 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGA........................................................................................................ 21 1 2 6.50 13 10 2 0 1 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCAT................................................................ 21 1 2 6.00 12 11 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGA..................................................................................................... 24 2 2 5.50 11 3 1 5 1 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTGT...................................................................................................... 23 1 2 5.50 11 7 4 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGA....................................................................................................... 23 1 2 5.50 11 9 0 0 2 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGT...................................................................................................... 23 1 2 5.00 10 6 4 0 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGGTT..................................................................................................... 24 1 2 5.00 10 7 2 0 0 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTAA................................................................................................... 26 1 1 5.00 5 1 3 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGT....................................................................................................... 22 1 2 4.50 9 8 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGG......................................................................................................... 20 1 2 4.50 9 3 1 5 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTAT........................................................................................................ 21 2 4 4.50 18 16 1 0 1 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGG........................................................................................................ 22 0 2 4.00 8 5 1 0 2 0 0 0
.....................................................................................AACATTCAATGCTGTCGGTG......................................................................................................... 20 1 5 4.00 20 17 1 1 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGGT..................................................................................................... 24 2 2 4.00 8 8 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGT...................................................................................................... 23 1 2 4.00 8 1 1 6 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGT.......................................................................................................... 19 1 3 3.67 11 10 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTG......................................................................................................... 20 1 2 3.50 7 3 4 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCTGTGGGTT..................................................................................................... 24 1 2 3.50 7 7 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGG....................................................................................................... 22 1 2 3.50 7 3 0 3 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGTT.......................................................................................................... 19 1 3 3.33 10 8 1 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTT....................................................................................................... 22 2 3 3.33 10 6 0 1 2 1 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAAA..................................................................................................... 24 3 3 3.00 9 7 2 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGGG......................................................................................................... 21 1 2 3.00 6 5 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTA.................................................................................................... 25 2 2 3.00 6 4 0 1 1 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTAA................................................................................................... 26 2 2 3.00 6 3 0 1 2 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTG......................................................................................................... 20 1 2 3.00 6 4 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCTGTGGGT...................................................................................................... 23 1 2 3.00 6 6 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGT.......................................................................................................... 19 1 2 3.00 6 4 2 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGGA...................................................................................................... 24 1 2 3.00 6 6 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTG......................................................................................................... 20 1 2 3.00 6 3 3 0 0 0 0 0
.....................................................................................AACATTCATTGCTGCCGGTGGGTT..................................................................................................... 24 1 2 3.00 6 4 1 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTTGGTGGGTT..................................................................................................... 24 1 2 3.00 6 3 2 1 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGTT..................................................................................................... 24 1 2 2.50 5 3 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGAA.................................................................................................... 25 3 2 2.50 5 0 0 4 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGG....................................................................................................... 22 1 2 2.50 5 5 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAT...................................................................................................... 23 1 2 2.50 5 3 1 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGAG......................................................................................................... 20 1 2 2.50 5 5 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTTT...................................................................................................... 23 2 3 2.33 7 7 0 0 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGG....................................................................................................... 22 1 2 2.00 4 3 0 0 0 1 0 0
.....................................................................................AACATTCATTTCTGTCGGTTGGTT..................................................................................................... 24 2 2 2.00 4 3 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGG...................................................................................................... 23 2 2 2.00 4 4 0 0 0 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCAAA............................................................... 22 1 1 2.00 2 1 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAA................................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGGTC.................................................................................................... 25 3 2 2.00 4 0 0 0 0 0 4 0
.....................................................................................AACATTCATTGCTGTCGCTGGGT...................................................................................................... 23 1 2 2.00 4 4 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGATC.................................................................................................... 25 3 2 2.00 4 0 0 0 0 0 3 1
...........................................................................................................................AGCTCACTGAACAATGAATGCA................................................................. 22 0 1 2.00 2 0 0 2 0 0 0 0
...........................................................................................................................AGCTCACTGAACAATGAATGCAA................................................................ 23 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTA....................................................................................................... 22 2 2 2.00 4 2 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGTA..................................................................................................... 24 2 2 2.00 4 3 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAG.................................................................................................... 25 1 1 2.00 2 0 1 0 1 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGT...................................................................................................... 23 1 2 2.00 4 4 0 0 0 0 0 0
...................................................................................AAAACATTCATTGCTGTCGGTGGGTT..................................................................................................... 26 2 2 2.00 4 1 3 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGG....................................................................................................... 21 0 2 2.00 4 1 0 2 1 0 0 0
.....................................................................................AACATTTATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 2.00 4 3 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGCTGGGTT..................................................................................................... 24 1 2 2.00 4 2 1 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGTAA.................................................................................................... 25 3 2 2.00 4 4 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCTGTG......................................................................................................... 20 1 3 2.00 6 6 0 0 0 0 0 0
.....................................................................................AACATCCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 2.00 4 3 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTAT................................................................................................... 26 3 3 1.67 5 2 0 3 0 0 0 0
....................................................................................CAACATTCATTGCTGTCTGTG......................................................................................................... 21 1 3 1.67 5 2 2 0 1 0 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGTT..................................................................................................... 24 1 3 1.67 5 5 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGATA.................................................................................................... 25 2 2 1.50 3 1 1 0 1 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGA........................................................................................................ 22 1 2 1.50 3 3 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGA.......................................................................................................... 20 1 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGATGGGT...................................................................................................... 23 1 2 1.50 3 2 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGTTA.................................................................................................... 25 2 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGTT...................................................................................................... 23 2 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGA...................................................................................................... 23 2 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTTTT..................................................................................................... 24 2 2 1.50 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGTTT..................................................................................................... 24 2 2 1.50 3 2 1 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGGGGGTT..................................................................................................... 23 1 2 1.50 3 1 0 2 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGTT..................................................................................................... 24 1 2 1.50 3 1 0 1 0 1 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGA...................................................................................................... 23 2 2 1.50 3 2 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTC.................................................................................................... 25 1 2 1.50 3 2 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTA................................................................................................... 26 1 2 1.50 3 2 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTC..................................................................................................... 24 1 2 1.50 3 1 1 0 0 1 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGA...................................................................................................... 23 2 2 1.50 3 1 1 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGT...................................................................................................... 23 1 2 1.50 3 2 0 1 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTAA........................................................................................................ 22 2 3 1.33 4 3 1 0 0 0 0 0
.....................................................................................AACATTCAATGCTGTCGGT.......................................................................................................... 19 1 5 1.20 6 4 1 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGAT......................................................................................................... 20 2 6 1.17 7 6 1 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGGAA..................................................................................................... 25 2 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGTT..................................................................................................... 24 1 2 1.00 2 0 0 2 0 0 0 0
.....................................................................................AACATTCACTGCTGTCGGT.......................................................................................................... 19 1 3 1.00 3 2 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGTTC.................................................................................................... 25 2 2 1.00 2 0 0 0 0 0 2 0
.............................................................................................................................CTCACTGAACACTGAATGCA................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................GTGTAGACAAGCTCACTGAA............................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGATT..................................................................................................... 24 1 2 1.00 2 1 0 0 0 0 1 0
.....................................................................................AACATTCATTGCTGTCGGTGTGA...................................................................................................... 23 2 3 1.00 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTAAA................................................................................................... 26 3 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGTA...................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGGTT..................................................................................................... 25 0 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCTGTGGG....................................................................................................... 22 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGATGGGTT..................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGATGTCGGTG......................................................................................................... 20 1 3 1.00 3 3 0 0 0 0 0 0
.....................................................................................AACATCCATTGCTGTCGGTG......................................................................................................... 20 1 2 1.00 2 0 1 0 0 1 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGGA...................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
....................................................................................................................GTAGACAAGCTCACTGAACAATGAAT.................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTCCTGTCGGTG......................................................................................................... 21 1 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGATC..................................................................................................... 24 3 2 1.00 2 0 0 0 0 0 2 0
....................................................................................CAACATTCATTGCTTTCGGTG......................................................................................................... 21 1 2 1.00 2 2 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGGAG.................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTTGGT...................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGTT..................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTA..................................................................................................... 23 1 2 1.00 2 0 2 0 0 0 0 0
..............................................................................................................................TCACTGAACAATGAATGCAAT............................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................AACATTCATCGCTGTCGGTGGGTT..................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0
.............................................................................................................GAACTGTGTAGACAAGCTCACTGA............................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGATGTCGGTGGGT...................................................................................................... 23 1 3 1.00 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTTGGT...................................................................................................... 23 2 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGG....................................................................................................... 22 1 2 1.00 2 1 1 0 0 0 0 0
..............................................................................................................................TCACTGAACAATGAATGCAT................................................................ 20 1 2 1.00 2 1 1 0 0 0 0 0
..............................................................................................................................TCACTGAACAATGAATGCAA................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGAGGGT...................................................................................................... 23 1 2 1.00 2 0 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGCCGGTGGGT...................................................................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0
..................................................................................................................GTGTAGACAAGCTCACTGAACCA......................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATCCATTGCTGTCGGTGGGA...................................................................................................... 23 2 2 1.00 2 2 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTTAA................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTA.................................................................................................... 25 2 2 1.00 2 0 0 2 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTAA................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................AGCTCACTGAACAATGAATGCAAAA.............................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTTTAT.................................................................................................. 27 2 2 1.00 2 0 0 2 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTATA................................................................................................... 26 2 2 1.00 2 0 1 1 0 0 0 0
........................................................................................................................ACAAGCTCACTGAACAATGAAA.................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................TTCACTGAACAATGAATGCA................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................ACAAGCTCACTGAACAATGAATGCAA................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTA................................................................................................... 26 2 3 1.00 3 1 0 1 1 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCAG................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGG.......................................................................................................... 19 1 2 1.00 2 0 0 2 0 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCC................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TTGCTGTCGGTGGGTTGAAC................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTATCGGTGGGTT..................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTCA................................................................................................... 26 2 2 1.00 2 1 0 1 0 0 0 0
.............................................................................................................GAACTGTGTAGACAAGCTCACT............................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................CTCACTGAACAATGAATGCAAC............................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGG........................................................................................................... 19 0 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGCTT..................................................................................................... 24 1 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTGAAA.................................................................................................. 27 3 1 1.00 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTTTCGGT.......................................................................................................... 20 1 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGAA....................................................................................................... 22 2 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCACTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGGTTTATC................................................................................................. 28 3 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................AACATTCATTGCTGTCGGGGGGG...................................................................................................... 23 2 2 1.00 2 1 0 1 0 0 0 0
.....................................................................................AACATTCATTGCCGTCGGTGGG....................................................................................................... 22 1 2 1.00 2 1 1 0 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTGGGT...................................................................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTTGGTT..................................................................................................... 23 1 2 1.00 2 2 0 0 0 0 0 0
........................................................................................................................ACAAGCTCACTGAACAATGAATG................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGGGGGGT..................................................................................................... 23 2 2 1.00 2 1 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGT........................................................................................................ 21 2 5 0.80 4 2 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGT........................................................................................................ 21 2 4 0.75 3 1 0 2 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTATA................................................................................................... 26 3 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCTGT.......................................................................................................... 19 1 6 0.67 4 4 0 0 0 0 0 0
.....................................................................................AACATTCATTGTTGTCGGTGGGTTTAT.................................................................................................. 27 3 3 0.67 2 0 1 1 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGTT....................................................................................................... 23 2 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAAT................................................................................................... 26 3 3 0.67 2 0 2 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGAA...................................................................................................... 22 2 3 0.67 2 0 2 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGTT...................................................................................................... 23 2 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGTTAT................................................................................................... 26 3 3 0.67 2 1 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTTGGTGGATC..................................................................................................... 24 3 3 0.67 2 0 0 0 0 0 2 0
.....................................................................................AACATTCATTGATGTCGGTGGGA...................................................................................................... 23 2 3 0.67 2 2 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGTT.......................................................................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTTAT................................................................................................... 26 3 3 0.67 2 0 1 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGAA...................................................................................................... 23 3 5 0.60 3 3 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTA......................................................................................................... 20 2 10 0.60 6 4 1 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTAAA....................................................................................................... 22 3 9 0.56 5 4 1 0 0 0 0 0
.....................................................................................AACATTCATTTCTGTCGGTT......................................................................................................... 20 2 20 0.55 11 9 2 0 0 0 0 0
.....................................................................................AACATTTATTGCTGTCGGTTGGT...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGGTC..................................................................................................... 24 2 2 0.50 1 0 0 0 0 0 1 0
......................................................................................ACATTCATTGCTGTCGGTG......................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCTGTGGGTT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGATA................................................................................................... 26 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTC......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGCGT........................................................................................................ 21 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTTGT...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATCCATTGCTGTCGGTTGGTT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTG........................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGGTTAT.................................................................................................. 27 3 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGA....................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTTCTGTCGGTG......................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................GACATTCATTGCTGTCGGTGGGGT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGT........................................................................................................ 20 1 2 0.50 1 0 1 0 0 0 0 0
....................................................................................CAACATTAATTGCTGTCGGT.......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................ACTTTCATTGCTGTCGGTGGGT...................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTCTCGGT.......................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGCTGGT....................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGTA..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTGGGTGG........................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................ATCATTCATTGCTGTCGGTGGG....................................................................................................... 22 1 2 0.50 1 0 0 1 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGCTG......................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
...................................................................................AAAACATTCATTGCTGTCGGGGGGTT..................................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGAAT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGGGTA..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGCGGGA...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTTGTT...................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................GACATTCATTGCTGTCGGT.......................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTGGGC..................................................................................................... 24 3 2 0.50 1 0 0 0 0 0 1 0
.......................................................................................CATTCATTGCTGTCGGTGGGT...................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCCTTGCTGTCGGT.......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACTTTCATTTCTGTCGGTGGGTT..................................................................................................... 24 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTGCCGTCGGTGGGG...................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGGAGT..................................................................................................... 24 3 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGTTGGGT...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTCCTGTCGGTG......................................................................................................... 20 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGCTGGGA...................................................................................................... 23 2 2 0.50 1 0 0 1 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGAT....................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTTG........................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATCCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................GACATTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTTTGTT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGGGG........................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGTGTT..................................................................................................... 24 2 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGG........................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTAGGTT..................................................................................................... 24 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................AACATTTATTGCTGTCGGTGGAT...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTCGGGA...................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACACTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCCGTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGGTTA.................................................................................................... 25 2 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCGCTGGGAA..................................................................................................... 24 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTTGGTT..................................................................................................... 24 2 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTGTCCGTGGGT...................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0
.....................................................................................AACATTCATTGCTGCCGGTGGGGT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGCG....................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGGAA...................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCCGTGGGATC.................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 0 1
.....................................................................................AACATTCATTGCTGTCGTTGTGT...................................................................................................... 23 2 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGATC.................................................................................................... 25 3 2 0.50 1 0 0 0 0 0 1 0
....................................................................................CAACATTCATTGCTGTCAGTGG........................................................................................................ 22 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AGCATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGGGTAC.................................................................................................... 25 2 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................TTCATTGCTGTCGGTGGGTT..................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTTTCGGTGTG....................................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AGCATTCATTGCTGTCGGTGGGGT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGCTG......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACACTCATTGCTGTCGGT.......................................................................................................... 19 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTCTCGGTGGA....................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTCTCGTTGG........................................................................................................ 21 2 2 0.50 1 1 0 0 0 0 0 0
......................................................................................ACATTCATTGCTCTCGGTGGGTT..................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGTAA.................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AATATTCATTGCTGTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 0 0 0 1 0 0 0
........................................................................................ATTCATTGCTGTCGGTGGGTA..................................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTTTCGGTGGGT...................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTCTCGGTGGGT...................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTCT...................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGTTGGTTT..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
....................................................................................CAACATTCATTGCTGTCGGTGATT...................................................................................................... 24 2 2 0.50 1 0 0 0 0 0 1 0
.....................................................................................AACATTCATCGCTGTGGGTGGTTT..................................................................................................... 24 3 2 0.50 1 0 0 1 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGAT..................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................GACATTCATTGCTGTCGGTGGGTT..................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCGGTGTGTA..................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTCTCGGTG......................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................AACATTCATTGCTGTCCGTGGG....................................................................................................... 22 1 2 0.50 1 0 1 0 0 0 0 0
......................................................................................ACATTCATTGCTGTCGGTGGGA...................................................................................................... 22 1 2 0.50 1 1 0 0 0 0 0 0

Anti-sense strand reads

TAAGCAACTTCTGTCCTTTGGTTTCCACCTGTGTGGTCCTGAAAGAGAAGGGACACGTCTCTAATAAAAAATTTTCCAGTGTTAGTTGTAAGTAACGACAGCCACCCAACTTGACACATCTGTTCGAGTGACTTGTTACTTACGTTGACACCGGGGCGAAAAACGACAGTGTTAGTTGTCTATAAGGTAGAAACTTTCTACACAAGTCTC

**************************************************.....(((((((.....(((((((((...((((((((((....(((....))))))))))))).)))))))))....)))))))......********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate
.......................................................................................GTAAGTAACGACAGCCAC......................................................................................................... 18 0 2 0.50 1 1

Generated: 09/01/2015 at 12:05 PM