ID:

mml-mir-17

Coordinate:

chr17:71887393-71887476 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.9 -34.4 -34.2

Sense Strand Reads

TTAGCAGGAATAAAGAGAACATCACCTTGTAAAACTGAAGATTGTGACCAGTCAGAATAATGTCAAAGTGCTTACAGTGCAGGTAGTGATATGTGCATCTACTGCAGTGAAGGCACTTGTAGCATTATGGTGACAGTTGCCTCGGGAAGCCAAGTTGGGCTTTAAAGTGCAGGGCCTGCTGCTG

************************************************..((((..(((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))..))))...***********************************************
Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle
SRR116840

epididymis
SRR116843

cortex
SRR116841

prostate
SRR116839

testes
SRR116845

epididymis
SRR116844

epididymis
....................................................................................................ACTGCAGTGAAGGCACTTGTAG.............................................................. 22 0 1 1497.00 1497 479 341 257 285 135 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 0 1 858.00 858 169 229 227 162 71 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGA............................................................. 23 1 1 477.00 477 209 114 59 73 22 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGATC............................................................................................... 26 3 2 381.00 762 0 0 0 0 0 576 186
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAA............................................................ 24 1 1 161.00 161 60 41 24 25 11 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGA................................................................................................. 24 1 1 160.00 160 30 37 46 17 27 0 3
...............................................................CAAAGTGCTTACAGTGCAGGTA................................................................................................... 22 0 1 142.00 142 21 42 39 27 13 0 0
...............................................................CAAAGTGCTTACAGTGCAGGT.................................................................................................... 21 0 1 120.00 120 21 33 27 31 8 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGC............................................................. 23 0 1 115.00 115 23 29 23 33 7 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 23 1 1 72.00 72 16 17 22 9 8 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 24 0 1 67.00 67 9 20 8 18 12 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGT................................................................ 20 0 1 58.00 58 11 8 23 8 8 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 23 1 1 56.00 56 7 23 16 9 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTA............................................................... 21 0 1 42.00 42 12 17 6 5 2 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAA................................................................................................ 25 2 1 40.00 40 8 12 6 4 10 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAG.............................................................. 21 0 1 31.00 31 9 5 5 11 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTATC.............................................................................................. 27 3 1 23.00 23 0 0 0 0 0 18 5
....................................................................................................ACTGCAGTGAAGGCACTTGTAGT............................................................. 23 1 1 22.00 22 9 4 1 7 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAT.............................................................. 22 1 1 21.00 21 1 8 1 8 3 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCT............................................................ 24 1 1 20.00 20 5 3 8 3 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCA............................................................ 24 0 1 18.00 18 5 4 3 5 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGG..................................................................................................... 20 0 1 16.00 16 3 3 3 5 0 1 1
.....................................................................................................CTGCAGTGAAGGCACTTGTAGA............................................................. 22 1 1 16.00 16 3 6 1 3 3 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGC............................................................. 22 0 1 15.00 15 1 6 4 4 0 0 0
......................................................................................................TGCAGTGAAGGCACTTGTAGAC............................................................ 22 2 2 14.00 28 7 6 11 1 3 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAA............................................................................................... 26 2 1 14.00 14 1 2 7 0 4 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGCA............................................................ 23 0 1 14.00 14 1 3 5 2 3 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAGT................................................................................................. 24 1 2 13.00 26 2 3 1 19 1 0 0
................................................................AAAGTGCTTACAGTGCAGGTAG.................................................................................................. 22 0 2 13.00 26 1 4 0 21 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAA........................................................... 25 2 1 13.00 13 1 6 2 2 2 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAT............................................................ 24 2 2 10.50 21 7 6 5 2 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTG................................................................. 19 0 1 10.00 10 3 4 1 1 1 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGT.................................................................................................... 22 0 1 10.00 10 2 5 1 2 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAA.............................................................. 22 1 1 9.00 9 2 1 3 2 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTTTAG.............................................................. 22 1 1 9.00 9 0 3 1 5 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTA................................................................................................... 23 0 1 9.00 9 2 1 1 5 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGTTAG.................................................................................................. 23 1 1 7.00 7 0 2 0 3 2 0 0
...............................................................CAAAGTGCTTACAGTGCAG...................................................................................................... 19 0 1 7.00 7 1 4 2 0 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGT................................................................................................. 23 0 1 6.00 6 0 0 0 6 0 0 0
...............................................................CAAAGTGCTTACAGTTCAGGTAG.................................................................................................. 23 1 1 6.00 6 0 1 1 3 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTT................................................................................................... 22 1 1 5.00 5 0 0 2 3 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAATC............................................................................................. 28 3 1 5.00 5 0 0 0 0 0 4 1
...............................................................CAAAGTGCTTACAGTGCAGGTAGTT................................................................................................ 25 1 1 5.00 5 2 0 1 1 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTA................................................................................................ 25 1 1 5.00 5 0 3 0 0 2 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGATC........................................................... 25 3 2 4.50 9 0 0 0 0 0 6 3
................................................................AAAGTGCTTACAGTGCAGGTAGA................................................................................................. 23 1 2 4.50 9 0 5 0 4 0 0 0
....................................................................................................ACTGCAGTGCAGGCACTTGTAG.............................................................. 22 1 1 4.00 4 2 0 1 1 0 0 0
...............................................................CAAAGAGCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 4.00 4 0 0 0 0 4 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTT............................................................... 21 1 1 4.00 4 0 1 0 3 0 0 0
....................................................................................................ACTGCAGTGAAGGCGCTTGTAG.............................................................. 22 1 1 4.00 4 1 1 1 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCTT........................................................... 25 1 1 4.00 4 1 0 1 1 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAT................................................................................................ 25 2 2 4.00 8 0 1 2 1 1 3 0
...............................................................CAAAGTGCTTACAGTGCAGGAA................................................................................................... 22 1 2 4.00 8 1 2 2 3 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAG.................................................................................................. 23 1 1 3.00 3 1 1 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGA..................................................................................................... 20 1 1 3.00 3 1 1 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGTA............................................................ 24 1 1 3.00 3 2 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTAA............................................................................................... 26 1 1 3.00 3 1 0 0 1 1 0 0
...................................................................................................TACTGCAGTGAAGGCACTTGTAG.............................................................. 23 0 1 3.00 3 2 1 0 0 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGAA............................................................ 23 1 1 3.00 3 2 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAG............................................................ 24 2 1 3.00 3 1 1 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAAA.............................................................................................. 27 3 1 3.00 3 0 1 0 1 1 0 0
.......................................................................................................GCAGTGAAGGCACTTGTAGACT........................................................... 22 2 1 3.00 3 0 2 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGATATC............................................................................................. 28 3 1 3.00 3 0 0 0 0 0 3 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGTAA........................................................... 25 2 1 3.00 3 2 0 1 0 0 0 0
....................................................................................................ACTGCCGTGAAGGCACTTGTAG.............................................................. 22 1 1 3.00 3 2 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCG............................................................ 24 1 1 3.00 3 2 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGTTA................................................................................................... 22 1 1 3.00 3 0 0 1 2 0 0 0
...............................................................CAAAGTGCTTACATTGCAGGTAG.................................................................................................. 23 1 1 3.00 3 0 0 2 0 1 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAT.................................................................................................. 24 1 1 3.00 3 0 1 1 0 1 0 0
................................................................AAAGTGCTTACAGTGCAGGTAA.................................................................................................. 22 1 2 3.00 6 1 0 2 3 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGCAA........................................................... 24 1 1 3.00 3 0 2 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAATT.............................................................................................. 27 3 2 2.50 5 1 1 0 0 0 3 0
................................................................AAAGTGCTTACAGTGCAGGTAT.................................................................................................. 22 1 2 2.50 5 0 2 0 3 0 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAGTAA............................................................................................... 26 2 1 2.00 2 0 0 0 2 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTTTAGA............................................................. 23 2 1 2.00 2 0 1 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTCG.............................................................. 22 1 1 2.00 2 1 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGATC.................................................................................................. 23 3 3 2.00 6 0 0 0 0 0 4 2
.....................................................................................................CTGCAGTGAAGGCACTTGTAGTA............................................................ 23 1 1 2.00 2 0 0 0 2 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGA.................................................................................................... 22 1 1 2.00 2 0 0 1 0 1 0 0
...............................................................CAAAGTGCTTACAGCGCAGGTAG.................................................................................................. 23 1 1 2.00 2 0 1 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGCAATC............................................................................................. 28 3 1 2.00 2 0 0 0 0 0 2 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTTC............................................................................................... 26 2 1 2.00 2 0 0 0 0 0 2 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCATC.......................................................... 26 1 1 2.00 2 0 0 0 0 0 1 1
...................................................................................................TACTGCAGTGAAGGCACTTGTAGA............................................................. 24 1 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGATT........................................................... 25 2 1 2.00 2 1 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGT..................................................................................................... 20 1 1 2.00 2 0 1 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATC................................................................................................. 24 2 2 2.00 4 0 0 0 0 0 0 4
................................................................AAAGTGCTTACAGTGCAGGTAGTATC.............................................................................................. 26 3 3 2.00 6 0 0 0 0 0 6 0
...............................................................CAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 24 1 1 2.00 2 1 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAAA................................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGTTAGT................................................................................................. 24 1 1 2.00 2 0 1 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCAA........................................................... 25 1 1 2.00 2 0 2 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAT............................................................................................... 26 3 2 2.00 4 2 2 0 0 0 0 0
....................................................................................................ACTGCTGTGAAGGCACTTGTAG.............................................................. 22 1 1 2.00 2 0 0 0 0 2 0 0
...............................................................CAAAGTGCTTACAGTGCAGGA.................................................................................................... 21 1 2 2.00 4 0 0 1 3 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAG...................................................................................................... 20 0 1 2.00 2 0 1 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTATA............................................................. 23 2 1 2.00 2 0 0 1 1 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGT............................................................. 22 1 1 2.00 2 0 1 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATA................................................................................................. 24 2 1 2.00 2 0 1 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAT........................................................... 25 1 1 2.00 2 1 0 0 0 1 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGCT............................................................ 23 1 1 2.00 2 0 1 1 0 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAGATC............................................................................................... 27 3 2 1.50 3 0 0 0 0 0 0 3
...............................................................CAAAGTGCTTACATTGCAGGTA................................................................................................... 22 1 2 1.50 3 0 1 2 0 0 0 0
...............................................................AAAAGTGCTTACAGTGCAGGTAAT................................................................................................. 24 2 2 1.50 3 0 0 0 3 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAC............................................................................................... 26 3 2 1.50 3 0 0 0 0 0 2 1
...............................................................AAAAGTGCTTACAGTGCAGGTATT................................................................................................. 24 2 2 1.50 3 0 0 0 3 0 0 0
..............................................................TCCAAGTGCTTACAGTGCAGGT.................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGTAGTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAGT............................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................AACTGCAGTGAAGGCACTTGTAG.............................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................CTGCAGTGAAGGTACTTGTAG.............................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTATTT................................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGTT............................................................ 24 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGGGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAGGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTTGA.............................................................................................. 27 3 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCAATTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................CACTGCAGTGAAGGCACTTGTAG.............................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGCAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTTCAGTGAAGGCACTTGTAGC............................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCGGTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................CACAGTGCTTACAGTGCAGGTAA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAG........................................................... 25 2 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTTCTGGTAG.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGCAGA............................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................TGCAGTGAAGGCACTTGTAGA............................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAGAGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGG................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAC............................................................ 24 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGTAGTGAAGGCACTTGTAGAA............................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTATC............................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAAT.......................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
..........................................TGTGACCAGTCAGAATAATGT......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGCGCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGGATT.......................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAGGTGCTTACAGTGCAGGT.................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTAGA................................................................................................. 25 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGTAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGAAATC............................................................................................. 27 3 1 1.00 1 0 0 0 0 0 1 0
...............................................................CAAAGTGCTTACATTGCAGGTAGA................................................................................................. 24 2 2 1.00 2 0 0 2 0 0 0 0
...............................................................CAATGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCGGTGAAGGCACTTGTAGA............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCCGGTAA.................................................................................................. 23 2 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAATTGCTTACAGTGCAGGTAT.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACCGCAGTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTACAGTGAAGGCACTTGTAT.............................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTAGAGTGCAGGTAGA................................................................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACGGCAGTGAAGGCACTTGTAGA............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTTCAGTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTTCTTACAGTGCAGGTAATC................................................................................................ 25 3 1 1.00 1 0 0 0 0 0 1 0
...............................................................CAAAGTGCTTACAGTGCAGGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGA..................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGGGAAGGT.................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCACTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGGACGCACTTGTAG.............................................................. 22 2 1 1.00 1 0 0 1 0 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGATC.................................................................................................. 24 3 1 1.00 1 0 0 0 0 0 0 1
...............................................................CAAAGTGCTTACAGTGCAGGTAATAAC.............................................................................................. 27 3 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGCAT........................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGATA............................................................................................... 26 2 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCGCTTGTAGCA............................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCATTGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTAACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTA............................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGTTAGA................................................................................................. 24 2 2 1.00 2 0 1 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGGACTC......................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTGATTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTAGCTT........................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAAGTAG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAACGTGCTTACAGTGCAGGTAGA................................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTGCAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGTG................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAC.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACCTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTTCTTACAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAAA.......................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAGGGCACTTGTAGA............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTTTA............................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................CTGCAATGAAGGCACTTGTAG.............................................................. 21 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACATGTAGA............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGGAG.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGATGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTAGTAG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAATTGCTTACAGTGCAGGTAGA................................................................................................. 24 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTTG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTATAGA............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................ACAAAGTGCTTACAGTGCAGGTAG.................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCCGGTAG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CTAAGTGCTTACAGTGCAGGTA................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0 0
..............................................................TCAAAGTGCTTACAGTGCAGGTT................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGAAAT.............................................................................................. 27 2 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAACGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGAACTTGTAG.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTAGAGTGCAGGTAG.................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTTGAA............................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTTTAGAA............................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................TACTGCAGTGAAGGCACTTGTAT.............................................................. 23 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGGAG.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTAAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATT................................................................................................. 24 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGAAC........................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGCCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAATGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTATT................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGGGAAGGCACTTGTAGA............................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
...........................................GTGACCAGTCAGAATAATGT......................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGGTTACAGTGCAGGTAA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGG.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGAAGT............................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGTACTTGTA............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCAC.................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAACGTGCTTACCGTGCAGGTAG.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGCGAAGGCACTTGTAG.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGCAA.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGAAGGTAGA................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGGAGA................................................................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTATAGCT............................................................ 24 2 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTTCAGGTAGA................................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGGGC............................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................ACTGCATTGAAGGCACTTGTAGTATC.......................................................... 26 3 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................ACTGCAGTGAAAGCACTTGT................................................................ 20 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAC.............................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGGGCAGGTAGA................................................................................................. 24 2 1 1.00 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTGCAGTGCAGGTAGT................................................................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................ACTGCAGTGAACGCACTTGTAGA............................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................TGCAGTGAAGGCACTTGTAGAAC........................................................... 23 2 3 0.67 2 2 0 0 0 0 0 0
....................................................................................................ACTGCAGTGGAGGCACTTGTAGA............................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAGA................................................................................................. 24 2 2 0.50 1 0 0 1 0 0 0 0
..................................................................................................AAACTGCAGTGAAGGCACTTGTAG.............................................................. 24 2 2 0.50 1 1 0 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGC........................................................................................................ 17 0 2 0.50 1 0 0 0 1 0 0 0
..................................................................................................AAACTGCAGTGAAGGCACTTGTAGC............................................................. 25 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTAGATA........................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
................................................................AAAGTGCTTACAGAGCAGGTAG.................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGGTC............................................................................................... 26 3 2 0.50 1 0 0 0 0 0 0 1
...............................................................CAAAGTGCTTACAGTTCAGTTAG.................................................................................................. 23 2 2 0.50 1 0 0 0 1 0 0 0
...............................................................CAAAGAGCTTACAGTGCAGGTAGAAA............................................................................................... 26 3 2 0.50 1 0 0 0 0 1 0 0
...............................................................CAAAGTGCTTACAGCGCAGGTAGAT................................................................................................ 25 3 2 0.50 1 0 0 0 0 0 1 0
....................................................................................................ACTGCAGGGAAGGCACTTGTAGAAA........................................................... 25 3 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCATTTGTAG.............................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................ACTGCAGGGAAGGCACTTGGAG.............................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0
................................................................AAAGTGCTTGCAGTGCAGGTAGA................................................................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTGG.............................................................. 22 1 2 0.50 1 0 0 0 0 1 0 0
................................................................AAAATGCTTACAGTGCAGGTAG.................................................................................................. 22 1 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTCGA............................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
..................................................................AGTGCTTACAGTTCAGGTAGCAA............................................................................................... 23 3 2 0.50 1 0 0 1 0 0 0 0
................................................................AACGTGCTTACAGTGCAGGTAGA................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
...............................................................AAAAGTGCTTACAGTACAGGTAGTA................................................................................................ 25 3 2 0.50 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTAGATG............................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCATGTAG.................................................................................................. 23 1 2 0.50 1 0 0 1 0 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTA................................................................................................... 21 0 2 0.50 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTTACAGTGCATGTAT.................................................................................................. 23 2 3 0.33 1 0 0 0 0 1 0 0
..................................................................................................AAACTGCAGTGAAGGCACTTGTAGA............................................................. 25 3 3 0.33 1 1 0 0 0 0 0 0
................................................................AAAGTGCTTACAGTGCATGT.................................................................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0
................................................................AAAGTGCTTACTGTGCAGGTAA.................................................................................................. 22 2 3 0.33 1 0 0 1 0 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTAGTAT............................................................................................... 25 2 3 0.33 1 0 0 0 1 0 0 0
.....................................................................................................CTGCAGTGAAGGCACTTGTG............................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGA................................................................ 20 1 3 0.33 1 0 1 0 0 0 0 0
................................................................AAAGTGCTTACAGTGCATGTAG.................................................................................................. 22 1 3 0.33 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGAAA.................................................................................................. 23 2 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTGTATTAA........................................................... 25 3 3 0.33 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTT................................................................. 19 1 7 0.29 2 0 0 0 2 0 0 0
...............................................................TAAAGTGCTTACAGTGCAGGTAA.................................................................................................. 23 2 4 0.25 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACATTGCAGGT.................................................................................................... 21 1 4 0.25 1 0 0 0 1 0 0 0
...............................................................CAAAGTGCTAACAGTGCAG...................................................................................................... 19 1 4 0.25 1 0 0 0 1 0 0 0
................................................................AAAGTGCTTACAGTTCAGGTAA.................................................................................................. 22 2 4 0.25 1 0 1 0 0 0 0 0
................................................................AAAGTGCTTACAGTGCAGGTGC.................................................................................................. 22 2 4 0.25 1 0 1 0 0 0 0 0
................................................................AAAGTGCTTACAGTGCATGTAT.................................................................................................. 22 2 5 0.20 1 0 0 0 1 0 0 0
...............................................................CACAGTGCTTACAGTGCAGGAA................................................................................................... 22 2 6 0.17 1 0 1 0 0 0 0 0
....................................................................................................ACTGCAGTGAAGGCACTTTTT............................................................... 21 2 6 0.17 1 0 0 1 0 0 0 0
.................................................................AAGTGCTTATAGTGCAGGTAGATA............................................................................................... 24 3 6 0.17 1 0 0 0 0 1 0 0
............................................................................................................GAAGGCACTTGTAGCATC.......................................................... 18 1 7 0.14 1 0 0 0 0 0 0 1
...............................................................CAAAGTGCTTAGAGTGCAGG..................................................................................................... 20 1 7 0.14 1 0 0 1 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGGTATAA................................................................................................ 25 3 8 0.13 1 0 0 1 0 0 0 0
........................................................................................................TAGTGAAGGCACTTGTAGTATC.......................................................... 22 3 9 0.11 1 0 0 0 0 0 0 1
.................................................................AAGTGCTTACAGTGCAGGTAAAA................................................................................................ 23 3 10 0.10 1 0 0 1 0 0 0 0
.................................................................................................AAAACTGCAGTGAAGGCACTTGT................................................................ 23 3 10 0.10 1 0 1 0 0 0 0 0
...............................................................CAAAGTGCTTACAGTGCAGAA.................................................................................................... 21 2 10 0.10 1 0 0 1 0 0 0 0
................................................................AAAGTGCTTACAGCGCAGGCAT.................................................................................................. 22 3 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

AATCGTCCTTATTTCTCTTGTAGTGGAACATTTTGACTTCTAACACTGGTCAGTCTTATTACAGTTTCACGAATGTCACGTCCATCACTATACACGTAGATGACGTCACTTCCGTGAACATCGTAATACCACTGTCAACGGAGCCCTTCGGTTCAACCCGAAATTTCACGTCCCGGACGACGAC

***********************************************..((((..(((((((..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))...)))))))..))))...************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:14 PM