ID:

mml-mir-155

 Coordinate:

chr3:21266295-21266359 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.0

Sense Strand Reads

TTCTTTATGCCTCATCCTCTGAGTGCTGAAGGCTTGCTGTAGGCTGTATGCTGTTAATGCTAATCGTGATAGGGGTTTTTACCTCCAACTGACTCCTACATGTTAGCATTAACAGGGTATGATGCCTGTTACTAGCATTCACATGGAACAAATTGCTGCCGTGGG

***********************************....(((((.((((.(((((((((((((.((((.((((((((.............))))))))))))))))))))))))).))))...)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116843

cortex		 SRR116841

prostate		 SRR116839

testes
.....................................................TTAATGCTAATCGTGATAGGGGTATC...................................................................................... 26 2 1 398.00 398 367 31 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGATC....................................................................................... 25 2 1 317.00 317 283 34 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTATC..................................................................................... 27 2 1 97.00 97 91 6 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGAATC...................................................................................... 26 3 1 64.00 64 57 7 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGATC........................................................................................ 24 2 1 45.00 45 37 8 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGT......................................................................................... 23 0 1 20.00 20 0 0 11 3 2 3 1
.....................................................TTAATGCTAATCGTGATAGGGGTATATC.................................................................................... 28 3 1 18.00 18 17 1 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTAATC..................................................................................... 27 3 1 14.00 14 14 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGAATC....................................................................................... 25 3 2 9.50 19 17 2 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTT....................................................................................... 25 0 1 8.00 8 0 0 3 3 0 2 0
.....................................................TTAATGCTAATCGTGATAGGGGTTTATC.................................................................................... 28 2 1 8.00 8 8 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGA......................................................................................... 23 1 1 6.00 6 0 0 2 2 2 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTTTATC................................................................................... 29 2 1 6.00 6 5 1 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTT........................................................................................ 24 0 1 6.00 6 0 0 0 4 2 0 0
.....................................................TTAATGCTAATCGTGATAGGGGCATC...................................................................................... 26 3 1 6.00 6 6 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGG.......................................................................................... 22 0 1 6.00 6 0 0 0 1 3 1 1
.....................................................TTAATGCTAATCGTGATAGGGGTTTT...................................................................................... 26 0 1 5.00 5 0 0 0 3 1 1 0
.....................................................TTAATGCTAATCGTGATAGGGTATC....................................................................................... 25 3 1 5.00 5 4 1 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGATATC..................................................................................... 27 3 1 5.00 5 5 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGAT........................................................................................ 24 1 1 4.00 4 2 0 0 0 1 1 0
.....................................................TTAATGCTAATCTTGATAGGGGTATC...................................................................................... 26 3 1 4.00 4 4 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTATATC................................................................................... 29 3 1 4.00 4 4 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTAATATC.................................................................................. 30 3 1 4.00 4 3 1 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTAATC.................................................................................... 28 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTATT...................................................................................... 26 1 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTACTCGTGATAGGGGATC....................................................................................... 25 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGA.......................................................................................... 22 1 1 3.00 3 0 0 2 0 1 0 0
.....................................................TTAATGCTAATCGTGATATGGGTATC...................................................................................... 26 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGGATC...................................................................................... 26 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGTTATC...................................................................................... 26 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGACC....................................................................................... 25 3 1 3.00 3 3 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGG........................................................................................... 21 0 1 3.00 3 0 0 1 0 1 1 0
.....................................................TTAATGCTAATCGTGATAGGATC......................................................................................... 23 3 2 2.00 4 2 2 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTCTC...................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0 0
......................................................TAATGCTAATCGTGATAGGGGTATC...................................................................................... 25 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGCGGTATC...................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTTATAGGGGTATC...................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTTTTATC.................................................................................. 30 1 1 2.00 2 1 1 0 0 0 0 0
.....................................................TTAATGCTAATCTTGATAGGGGATC....................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTC....................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0 0
......................................................TAATGCTAATCGTGATAGGGGATC....................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATATGGGATC....................................................................................... 25 3 1 2.00 2 1 1 0 0 0 0 0
.......................................................AATGCTAATCGTGATAGGGGTGTATC.................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGAA........................................................................................ 24 2 1 2.00 2 1 0 0 1 0 0 0
.....................................................TTAATCCTAATCGTGATAGGGGTTATC..................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0 0
....................................................CTTAATGCTAATCGTGATAGGGATC........................................................................................ 25 3 1 2.00 2 2 0 0 0 0 0 0
.....................................................TTAATGCTAATCTTGATAGGGATC........................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTTATCGTGATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTCATGCTAATCGTGATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.......................................................AATGCTAATCGTGATAGGGGTTTATC.................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATACGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATATGGGTTATC..................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTATTCGTGATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATCGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGTC......................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTCTC..................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGTGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.......................................................AATGCTAATCGTGATAGGGGATC....................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTATT..................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATTGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATTCTAATCGTGATAGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGCTC....................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTTC...................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGGTAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTA........................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATGGGGA.......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0
.......................................................AATGCTAATCGTGTTAGGGGTTATC..................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTCATC..................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGTTAGGGGTTC....................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGTT.......................................................................................... 22 2 1 1.00 1 0 0 0 0 0 1 0
.....................................................TTAATGCTAATCGTTATAGGGGTTATC..................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATTCTAATCGTGATAGGGGTTATC..................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAAACGTGATAGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGTTAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGATT....................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAACGCTAATCGTGATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGTGGT......................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................TTCATGCTAATCGTGATAGGGGTATC...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGAT............................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................TTAATGCTAACCGTGATAGGGGTATA...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAACGCTAATCGTGATAGGGCTC........................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGAAAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTACTCGTGATAGGGA.......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0 0
.......................................................AATGCTAATCGTGATAGGGGTTATC..................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTTATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATTGTGATAGGGGATC....................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGG............................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................TTAAGGCTTATCGTGATAGGGGTT........................................................................................ 24 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................TTAATGCTAATCGTGATAGGGGATATT..................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTAATGCTAATCGTGATAGGGGTTTTT..................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0
.....................................................TTAATGCTAATCGTGATATGGATC........................................................................................ 24 3 2 0.50 1 1 0 0 0 0 0 0
.....................................................TTAATTCTAATCGTGATAGGGATC........................................................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0

Anti-sense strand reads

AAGAAATACGGAGTAGGAGACTCACGACTTCCGAACGACATCCGACATACGACAATTACGATTAGCACTATCCCCAAAAATGGAGGTTGACTGAGGATGTACAATCGTAATTGTCCCATACTACGGACAATGATCGTAAGTGTACCTTGTTTAACGACGGCACCC

***********************************....(((((.((((.(((((((((((((.((((.((((((((.............))))))))))))))))))))))))).))))...)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:21 PM