ID:

mml-mir-153-1

 Coordinate:

chr12:83040025-83040114 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-48.2

Sense Strand Reads

TTTCCTCTCTCTGTCCTTCCCTCTCCCTTCTTCCCTCTTTCTCTCTCTCCCTCACAGCTGCCAGTGTCATTTTTGTGATCTGCAGCTAGTATTCTCACTCCAGTTGCATAGTCACAAAAGTGATCATTGGCAGGTGTGGCTGCTGCATGGACAGACAGGACATGTGGCCCGGGGACCACCCCGAGCTGGG

**************************************************.(((((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).)))))..************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116841

prostate		 SRR116845

epididymis		 SRR116840

epididymis		 SRR116844

epididymis
.......................................................................................................TTGCATAGTCACAAAAGTGATCA................................................................ 23 0 1 101.00 101 99 2 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGATCAT............................................................... 24 0 1 27.00 27 27 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGATC................................................................. 22 0 1 22.00 22 22 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGA................................................................... 20 0 1 21.00 21 21 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGAT.................................................................. 21 0 1 14.00 14 13 0 0 1 0
.......................................................................................................TTGCATAGTCACAAAAGTG.................................................................... 19 0 1 6.00 6 6 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTA.................................................................... 19 1 1 2.00 2 2 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGATA................................................................. 22 1 1 2.00 2 2 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTAA................................................................... 20 1 1 2.00 2 2 0 0 0 0
.................................................................GTCATTTTTGTGATCTGCAGCT....................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGT................................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCATAAAAGTGATC................................................................. 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCATAAAAGTGATCAT............................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAACAGTGAT.................................................................. 21 1 1 1.00 1 1 0 0 0 0
.........................................................................................................GCATAGTCACAAAAGTGATCAT............................................................... 22 0 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAGGTGATCA................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATATTCACAAAAGTGATCA................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATATTCACAAAAGTGATC................................................................. 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................................CTGCATAGTCACAAAAGTGATCAT............................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGTTCA................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAACAGTGATCA................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCATAAAAGTGATCA................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAATTGATCAT............................................................... 24 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGATCACC.............................................................. 25 2 1 1.00 1 0 0 1 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGATATC............................................................... 24 3 4 0.50 2 0 0 1 0 1
.......................................................................................................TTGCATAGTCATAAAAGTGA................................................................... 20 1 3 0.33 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGTTT................................................................. 22 2 4 0.25 1 1 0 0 0 0
.......................................................................................................TTGCATAGTCACAAAAGTGAATC................................................................ 23 3 4 0.25 1 0 0 0 0 1
.................................................................GTCATTTTTGTGATCTTCATCT....................................................................................................... 22 2 7 0.14 1 1 0 0 0 0

Anti-sense strand reads

AAAGGAGAGAGACAGGAAGGGAGAGGGAAGAAGGGAGAAAGAGAGAGAGGGAGTGTCGACGGTCACAGTAAAAACACTAGACGTCGATCATAAGAGTGAGGTCAACGTATCAGTGTTTTCACTAGTAACCGTCCACACCGACGACGTACCTGTCTGTCCTGTACACCGGGCCCCTGGTGGGGCTCGACCC

*************************************************.(((((.((((((((((((((((((((((.((((((((((......)))..)))))))..))))))))))))).))))))))).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:08 PM