ID:

mml-mir-150

 Coordinate:

chr19:55535895-55535978 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-56.1 -55.6

Sense Strand Reads

GCCCACGGGGAGACGGCGTCCCCGAGACAGCAGCGGCAGCGGCGGCTCCTCTCCCCATGGCCCTGTCTCCCAACCCTTGTACCAGTGCTGGGCTCAGACCCTGGTACAGGCCTGGGGGACAGGGACCTGGGGACCCCGGCACCGGCAGGCCCGAAAGAGGTCAGCAAGCATTCAGACCTCCCTT

**************************************************.((((((.((((((((((((((..(((.(((((((..(((....)))...))))))))))..)))))))))))).))))))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis		 SRR116845

epididymis		 SRR116843

cortex		 SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle
.................................................................TCTCCCAACCCTTGTACCAGTGATC.............................................................................................. 25 2 1 168.00 168 128 40 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTATC............................................................................................... 24 3 2 19.50 39 33 6 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACA............................................................... 21 0 1 13.00 13 0 0 3 5 3 2
.................................................................TCTCCCAACCCTTGTACCAGT.................................................................................................. 21 0 1 5.00 5 0 0 1 2 2 0
.................................................................TCTCCCAACCCTTGTACCAGTGCATC............................................................................................. 26 3 1 4.00 4 3 1 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTGAC............................................................................................... 24 2 1 4.00 4 1 3 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTAATC.............................................................................................. 25 3 1 3.00 3 1 2 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACAA.............................................................. 22 1 1 3.00 3 0 0 2 0 0 1
...................................................................................................CCTGGTACAGGCCTGGGGGACA............................................................... 22 0 1 3.00 3 0 0 2 0 1 0
.................................................................TCTCCCAACCCTTGTACCAGTG................................................................................................. 22 0 1 3.00 3 0 0 0 2 1 0
.........................................................................................................................GGGACCTGGGGACTCCGGCA........................................... 20 1 1 2.00 2 0 0 1 0 0 1
.................................................................TCTCCCAACCCTTGTACCAGTGTC............................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGATC................................................................................................ 23 2 1 2.00 2 2 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTCCCAGTGATC.............................................................................................. 25 3 1 2.00 2 2 0 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACAT.............................................................. 22 1 1 2.00 2 0 0 1 1 0 0
.................................................................TCTCCCAACCCTTTTACCAGTGATC.............................................................................................. 25 3 1 2.00 2 1 1 0 0 0 0
.................................................................TCTCCCAACCGTTGTACCAGTGATC.............................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTGCTC.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTGATA.............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACAGTT............................................................ 24 2 1 1.00 1 0 0 0 0 1 0
.................................................................TCTCCCAACCCTTGTACCAGTTC................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................GGGACCTGGGGACCCCGGCA........................................... 20 0 1 1.00 1 0 0 0 1 0 0
...................................................................................................CCTGGTACAGGCCTGGGGGACAT.............................................................. 23 1 1 1.00 1 0 0 1 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTCATC.............................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGAC................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
.................................................................TCTCCCACCCCTTGTACCAGTGATC.............................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACATT............................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTGTTC.............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACATC............................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTA................................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0
.................................................................TCTCCCAACCCTTGTACCAATC................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCATTGATC.............................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0
.................................................................TCTCCCAACCATTGTACCAGTGATC.............................................................................................. 25 3 1 1.00 1 1 0 0 0 0 0
...................................................................................................CCTGGTACAGGCCTGGGGGACATT............................................................. 24 2 1 1.00 1 0 0 1 0 0 0
...............................................................TGTCTCCCAACCCTTGTACCAGTGATC.............................................................................................. 27 2 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................GGGACCTGGGAACCCCGGCAA.......................................... 21 2 3 0.67 2 0 0 2 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACAGA............................................................. 23 1 2 0.50 1 0 0 1 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGGGATC.............................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0
.................................................................TCTCCCAACCCTTGTACCAGTTATC.............................................................................................. 25 3 2 0.50 1 0 1 0 0 0 0
....................................................................................................CTGGTACAGGCCTGGGGGACATA............................................................. 23 2 2 0.50 1 0 0 0 1 0 0
...................................................................TCCCAACCCTTGTACCAGTGCTATC............................................................................................ 25 3 2 0.50 1 1 0 0 0 0 0
...................................................................................................CCTGGTACAGGCCTGGGGGACAAA............................................................. 24 2 2 0.50 1 0 0 0 0 0 1
.........................................................................................................................GGGACCTGGGGACCCCGGCAA.......................................... 21 1 2 0.50 1 0 0 0 0 1 0
...............................................................TGTCTCCCAACCCTTGTACCAGTATC............................................................................................... 26 3 2 0.50 1 0 1 0 0 0 0
.................................................................TCTCCCAACCTTTGTACCAGTGATC.............................................................................................. 25 3 2 0.50 1 1 0 0 0 0 0

Anti-sense strand reads

CGGGTGCCCCTCTGCCGCAGGGGCTCTGTCGTCGCCGTCGCCGCCGAGGAGAGGGGTACCGGGACAGAGGGTTGGGAACATGGTCACGACCCGAGTCTGGGACCATGTCCGGACCCCCTGTCCCTGGACCCCTGGGGCCGTGGCCGTCCGGGCTTTCTCCAGTCGTTCGTAAGTCTGGAGGGAA

************************************************.((((((.((((((((((((((..(((.(((((((..(((....)))...))))))))))..)))))))))))).))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116842

seminal vesicle		 SRR116845

epididymis
.............................................GAGGAGAGGGGTACCGGGA........................................................................................................................ 19 0 1 1.00 1 1 0
..........................................................CTAGGACAGAGGGTTGGGAACATGGT.................................................................................................... 26 2 1 1.00 1 0 1

Generated: 09/01/2015 at 12:15 PM