ID:

mml-mir-147b

Coordinate:

chr7:22610603-22610682 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.1 -38.8

Sense Strand Reads

GAAGGGCGACCAAATGACCAGCCCTCGCCTCTTTATTTCAAAGAGTACTCTATAAATCTAGTGGAAACATTTCCGCACAAACTAGATTCTGGACACCAGTGTGCGGAAGTGCTTCTGCTGCATTTTTAGGGTTTGTCTACATTTTTTGGGCTCCAGATAAGGAATTAAAGGAGCACAGCA

***********************************......(((..((((((.((((.((((((((.((((((((((((.........((((...)))))))))))))))).)))))))).)))).))))))...))).......***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate
SRR116839

testes
SRR116840

epididymis
SRR116843

cortex
..................................................................................................GTGTGCGGAAGTGCTTCTGCTGC........................................................... 23 0 1 1.00 1 0 1 0 0
...................................................................................................TGTGCGGAAGTGCTTTTGCTGCA.......................................................... 23 1 1 1.00 1 1 0 0 0
...................................................................................................TGTGCGGAAGTGCTTCTGCTGC........................................................... 22 0 1 1.00 1 1 0 0 0
..................................................................................................GTGTGCGGAAGTGCTTCTGCTG............................................................ 22 0 1 1.00 1 0 0 0 1
..................................................................................................GTGTGCGGAAGTGCTTCTGTT............................................................. 21 1 1 1.00 1 0 0 1 0

Anti-sense strand reads

CTTCCCGCTGGTTTACTGGTCGGGAGCGGAGAAATAAAGTTTCTCATGAGATATTTAGATCACCTTTGTAAAGGCGTGTTTGATCTAAGACCTGTGGTCACACGCCTTCACGAAGACGACGTAAAAATCCCAAACAGATGTAAAAAACCCGAGGTCTATTCCTTAATTTCCTCGTGTCGT

***********************************......(((..((((((.((((.((((((((.((((((((((((.........((((...)))))))))))))))).)))))))).)))).))))))...))).......***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:26 PM