ID:

mml-mir-136

 Coordinate:

chr7:164782532-164782623 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-45.0

Sense Strand Reads

CTGGCCCTGCCTCTCCCTGTACTCCACTGCCCGATGTCGCCTCGGTGGTGTTGGATGAGCCCTCGGAGGACTCCATTTGTTTTGATGATGGATTCTTATGCTCCATCATCGTCTCAAATGAGTCTTCAGAGGGTTCTATCATTTCGTCGGATGGAAAGGAGTGTATTCTGAAGATTGGTAAGGTTGTGACGG

******************************************************..((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))....**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116844

epididymis		 SRR116841

prostate		 SRR116840

epididymis		 SRR116845

epididymis		 SRR116842

seminal vesicle		 SRR116839

testes
.......................................................................................................CATCATCGTCTCAAATGAGTCT................................................................... 22 0 1 223.00 223 150 0 33 24 0 10 6
.....................................................................ACTCCATTTGTTTTGATGATGGA.................................................................................................... 23 0 1 186.00 186 133 4 20 14 0 13 2
.....................................................................ACTCCATTTGTTTTGATGATGGATC.................................................................................................. 25 1 1 177.00 177 0 133 0 0 44 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGAA................................................................................................... 24 1 1 160.00 160 119 0 14 18 0 9 0
........................................................................................................ATCATCGTCTCAAATGAGTCT................................................................... 21 0 1 34.00 34 25 0 4 4 0 1 0
.....................................................................ACTCCATTTGTTTTGATGATGGAATC................................................................................................. 26 1 1 24.00 24 0 22 0 0 2 0 0
.....................................................................ACTCCATTTGTTTTTATGATGGA.................................................................................................... 23 1 1 18.00 18 14 0 3 1 0 0 0
...................................................................GGACTCCATTTGTTTTGATGATATC.................................................................................................... 25 3 1 17.00 17 0 12 0 0 5 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCTATC................................................................ 25 3 1 14.00 14 0 10 0 0 4 0 0
..................................................................AGGACTCCATTTGTTTTGATGAT....................................................................................................... 23 0 1 14.00 14 10 0 1 1 0 2 0
.........................................................................CATTTGTTTTGATGATGGAATC................................................................................................. 22 1 1 12.00 12 0 12 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATTATGGATC.................................................................................................. 25 2 1 8.00 8 0 6 0 0 2 0 0
.....................................................................ACTCCATTTGTTTTTATGATGGAA................................................................................................... 24 2 2 7.50 15 13 0 0 2 0 0 0
..................................................................AGGACTCCATTTGTTTTGATGA........................................................................................................ 22 0 1 6.00 6 4 0 1 1 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGT..................................................................... 20 0 2 6.00 12 5 0 3 2 0 2 0
.....................................................................ACTCCATTTGTTTTGATTATGGAA................................................................................................... 24 2 1 6.00 6 4 0 0 2 0 0 0
.......................................................................................................CATCATCGTCTCAAATGATTCT................................................................... 22 1 1 6.00 6 4 0 1 1 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGAAA.................................................................................................. 25 2 1 5.00 5 4 0 0 1 0 0 0
......................................................................CTCCATTTGTTTTGATGATGGA.................................................................................................... 22 0 1 5.00 5 4 0 0 1 0 0 0
......................................................................CTCCATTTGTTTTGATGATGGAA................................................................................................... 23 1 1 5.00 5 4 0 1 0 0 0 0
......................................................................CTCCATTTGTTTTGATGATGGATC.................................................................................................. 24 1 1 5.00 5 0 4 0 0 1 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTC.................................................................... 21 0 2 4.00 8 5 0 2 0 0 1 0
.....................................................................ACTCCATTTGTTTTGATGATGG..................................................................................................... 22 0 1 4.00 4 3 0 0 0 0 0 1
.....................................................................ACTCCATTTGTTTTGATGATGTA.................................................................................................... 23 1 1 4.00 4 2 0 1 1 0 0 0
...................................................................GGACTCCATTTGTTTTGATGAATC..................................................................................................... 24 3 2 3.50 7 0 5 0 0 2 0 0
..................................................................AGGACTCCATTTGTTTTGATGATATC.................................................................................................... 26 3 1 3.00 3 0 2 0 0 1 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCTA.................................................................. 23 1 1 3.00 3 1 2 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATTAGTCT................................................................... 22 1 1 3.00 3 2 0 0 0 0 0 1
.....................................................................ACTCCATTTGTTTTGATGATGTAA................................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATCATGGATC.................................................................................................. 25 2 1 3.00 3 0 2 0 0 1 0 0
........................................................................................................ATCATCGTCTCAAATTAGTCT................................................................... 21 1 1 3.00 3 2 0 0 1 0 0 0
......................................................................CTCCATTTGTTTTGATGATGG..................................................................................................... 21 0 1 3.00 3 0 0 1 2 0 0 0
.....................................................................ACTCTATTTGTTTTGATGATGGATC.................................................................................................. 25 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................................CATTTGTTTTGATGATGGATC.................................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0 0
..........................................................................................................CATCGTCTCAAATGAGTCTT.................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGAGTCTT.................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0
..................................................................AGGACTCCATTTGTTTTGATGAATC..................................................................................................... 25 3 1 2.00 2 0 0 0 0 2 0 0
..........................................................................ATTTGTTTTGATGATGGATC.................................................................................................. 20 1 1 2.00 2 0 2 0 0 0 0 0
..................................................................AGGACTCCATTTGTTTTGATGATA...................................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0 0
..................................................................AGGACTCCATTTGTTTTTATGA........................................................................................................ 22 1 1 2.00 2 0 0 1 1 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCTT.................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................TCATCGTCTCAAATGAGTCTTCATC.............................................................. 25 2 1 2.00 2 0 2 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGATTCTT.................................................................. 22 1 1 2.00 2 1 0 1 0 0 0 0
...................................................................AAACTCCATTTGTTTTGATGATGGAA................................................................................................... 26 3 2 2.00 4 2 0 1 1 0 0 0
.....................................................................ACTCCATTTGTTTTGATGA........................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGAC................................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATTATGGA.................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................AGGACTCCATTTGTTTTGAT.......................................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAG...................................................................... 19 0 2 1.50 3 3 0 0 0 0 0 0
....................................................................GACTCCATTTGTTTTGATGATGATC................................................................................................... 25 3 2 1.50 3 0 1 0 0 2 0 0
........................................................................................................ATCATCGTCTCAAATGAGTCTATC................................................................ 24 3 4 1.25 5 0 5 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGATT.................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATTGA.................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGCTC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................TCATCGTCTCAAATGAGTCTTC................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCTAT................................................................. 24 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................GCTCCATTTGTTTTGATGATGGATC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
..................................................TTGGATGAGCCCTCGGAGGA.......................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................AGGACTCCATTTGTTTTGATGAAA...................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCATC................................................................. 24 1 1 1.00 1 0 0 0 0 1 0 0
...................................................TGGATGAGCCCTCGGAGGAA......................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGT..................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGACGGA.................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATTATGG..................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCACTTGTTTTGATGATGGA.................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AGGACTCCATTTGTTTTGATGATC...................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACTCCCTTTGTTTTGATTATGGATC.................................................................................................. 25 3 1 1.00 1 0 1 0 0 0 0 0
...................................................................GGACTCCATTTGTTTTGATGATA...................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACTCCATTTTTTTTGATGATGGATC.................................................................................................. 25 2 1 1.00 1 0 0 0 0 1 0 0
.....................................................................ACTCCATTTGTTTTGATGATTGAA................................................................................................... 24 2 2 1.00 2 2 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGCTGGATC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGAACC................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACTCCCTTTGTTTTGATGATGGA.................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
......................................................................CTCCATTTGTTTTGATGATTGA.................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGAGTATC.................................................................. 22 2 2 1.00 2 0 2 0 0 0 0 0
.....................................................................ACTCGATTTGTTTTGATGATGGA.................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCACATGAGTCT................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTTTTTTGATGATGGAATC................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGGATC................................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0 0
.........................................................................CATTTGTTTTGATGATGGAAT.................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGAGTCTTT................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................CATCGTCTCAAATGAGTCTTC................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATCAGTCT................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGCA................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATAGTCTCAAATGAGTCT................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTCTTGATGATGGAA................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGGA................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTCTAA................................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................................CACCATCGTCTCAAATGAGTCT................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................AGGACTCCATTCGTTTTGATGAT....................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGATTCT................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAACTGAGTCT................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0
.......................................................................................................CTTCATCGTCTCAAATGAGTCT................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
..................................................TTGGATGAGCCCTCGGAGGATC........................................................................................................................ 22 2 1 1.00 1 0 0 0 0 1 0 0
..................................................................AGGACTCCATTTGTTTTGATTAT....................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
...............................................GTGTTGGATGAGCCCTCGGA............................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................CATCGTCTCAAATGAGTCTTAA................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGTTC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
...................................................TGGATGAGCCCTCGGAGGATC........................................................................................................................ 21 2 1 1.00 1 0 0 0 0 1 0 0
..................................................................AGGACTCCATTTGTTTTGATTATA...................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGAT....................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGT.................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATG...................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATAAGTCT................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................CATCGTCTCAAATGAGTCTTCTAA.............................................................. 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGGGTC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGAGTCTTA................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ACTCCCTTTGTTTTGATGATGGATC.................................................................................................. 25 2 1 1.00 1 0 1 0 0 0 0 0
.....................................................................AATCCATTTGTTTTTATGATGGA.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................ATCATCGTCTCAACTGAGTCT................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGAGTATC.................................................................. 23 2 2 0.50 1 0 1 0 0 0 0 0
.......................................................................................................CATCATCGTCTCAAATGATTC.................................................................... 21 1 2 0.50 1 0 0 0 1 0 0 0
.......................................................................................................CATCATCGTCTCAAATG........................................................................ 17 0 2 0.50 1 0 0 1 0 0 0 0
..................................................................CGGACACCATTTGTTTTGATGA........................................................................................................ 22 2 2 0.50 1 0 0 0 0 0 1 0
.....................................................................ACTCCATTTGTTTTGATTATTGA.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATTATGTA.................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................ATCATCGTCTCAAATGAGTAA................................................................... 21 2 3 0.33 1 0 0 0 0 0 1 0
..................................................................AGGACTCCATTTGTTTTTAT.......................................................................................................... 20 1 4 0.25 1 1 0 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATGATGTTA................................................................................................... 24 3 5 0.20 1 1 0 0 0 0 0 0
..........................................................................ATTTGTTTTGATGACGGATC.................................................................................................. 20 2 8 0.13 1 0 1 0 0 0 0 0
.......................................................................ACTATTTGTTTTGATGATGGATC.................................................................................................. 23 3 8 0.13 1 0 1 0 0 0 0 0
.....................................................................ACTCCATTTGTTTTGATTTTGGAA................................................................................................... 24 3 9 0.11 1 0 0 0 1 0 0 0
.......................................................................................................CATCATCGTCTCAAATA........................................................................ 17 1 10 0.10 1 0 0 0 1 0 0 0
....................................................GGATGAGCCCTCGTTGGAATC....................................................................................................................... 21 3 15 0.07 1 0 1 0 0 0 0 0
..............................................................................GTTTTGATGATGGAATC................................................................................................. 17 1 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

GACCGGGACGGAGAGGGACATGAGGTGACGGGCTACAGCGGAGCCACCACAACCTACTCGGGAGCCTCCTGAGGTAAACAAAACTACTACCTAAGAATACGAGGTAGTAGCAGAGTTTACTCAGAAGTCTCCCAAGATAGTAAAGCAGCCTACCTTTCCTCACATAAGACTTCTAACCATTCCAACACTGCC

****************************************************..((((((((.((((((((.(((((...((((((((((.........))))))))))...))))))))))))).))))))))....****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116844

epididymis
.....................................................CTACTCGGCAGCATCTTGAG....................................................................................................................... 20 3 14 0.07 1 1 0
...........................................................................................................................CAAGTCTCCCAAGATCGT................................................... 18 2 20 0.05 1 0 1

Generated: 09/01/2015 at 12:28 PM