ID:

mml-mir-134

 Coordinate:

chr7:164953119-164953191 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.1 -39.7 -39.7

Sense Strand Reads

CCCTGGGCCCCAGGCCGACTTCCAGAAGAGATGTTGGTGTCAGCACCGTCCAGGGTGTGTGACTGGTTGACCAGAGGGGCGTGCACTGTGTTCACCCTGTGGGCCACCTAGTCACCAACCCTCAGCATCACTCCCACCCCAGGAAGACTTTCCAGAGCTCCCACCGACTCTGG

***********************************((((..((....((..(((((..((((((((.((.(((.((((....(((...)))...)))).)))..)).))))))))..)))))..))....))..))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116844

epididymis		 SRR116845

epididymis		 SRR116841

prostate		 SRR116840

epididymis		 SRR116842

seminal vesicle		 SRR116839

testes
.........................................................TGTGACTGGTTGACCAGAGGGGATC........................................................................................... 25 3 1 303.00 303 0 165 138 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGG.............................................................................................. 22 0 1 161.00 161 110 0 0 25 12 9 5
.........................................................TGTGACTGGTTGACCAGAGGGGTATC.......................................................................................... 26 3 1 108.00 108 0 78 30 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGG............................................................................................... 21 0 1 97.00 97 72 0 0 10 12 3 0
.........................................................TGTGACTGGTTGACCAGAGGGGT............................................................................................. 23 1 1 86.00 86 69 0 0 7 8 1 1
.........................................................TGTGACTGGTTGACCAGAGGGGAATC.......................................................................................... 26 3 1 77.00 77 0 52 25 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAT............................................................................................ 24 2 1 60.00 60 41 0 0 5 11 0 3
.........................................................TGTGACTGGTTGACCAGAGGGGTTT........................................................................................... 25 2 1 57.00 57 50 0 0 6 0 0 1
.........................................................TGTGACTGGTTGACCAGAGGGGA............................................................................................. 23 1 1 56.00 56 30 0 0 11 8 3 4
.........................................................TGTGACTGGTTGACCAGAGGGGTT............................................................................................ 24 2 1 49.00 49 36 0 0 7 1 3 2
.........................................................TGTGACTGGTTGACCAGAGGGGTAT........................................................................................... 25 2 1 42.00 42 32 0 0 2 5 1 2
.........................................................TGTGACTGGTTGACCAGAGGGA.............................................................................................. 22 1 1 37.00 37 27 0 0 3 6 0 1
.........................................................TGTGACTGGTTGACCAGAGG................................................................................................ 20 0 1 29.00 29 21 0 0 4 4 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAA............................................................................................ 24 2 1 29.00 29 19 0 0 4 6 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGATT........................................................................................... 25 2 1 29.00 29 18 3 0 4 2 1 1
.........................................................TGTGACTGGTTGACCAGAGGGATC............................................................................................ 24 3 1 29.00 29 0 15 14 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTTTT.......................................................................................... 26 3 1 25.00 25 21 0 0 2 2 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTA............................................................................................ 24 2 1 23.00 23 17 0 0 3 2 0 1
.........................................................TGTGACTGGTTGACCAGAGGGAA............................................................................................. 23 2 1 12.00 12 8 0 0 1 3 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTTA........................................................................................... 25 3 1 9.00 9 8 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAAT........................................................................................... 25 2 1 8.00 8 3 0 0 4 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGATTT.......................................................................................... 26 3 1 8.00 8 8 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGATC............................................................................................. 23 2 1 8.00 8 0 5 3 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAT............................................................................................. 23 2 1 7.00 7 5 0 0 2 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGATA........................................................................................... 25 3 1 7.00 7 4 0 0 1 2 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGGATC.......................................................................................... 26 3 1 6.00 6 0 4 2 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAAA............................................................................................ 24 3 1 6.00 6 4 0 0 0 1 1 0
.........................................................TGTGACTGGTTGACCAGAGGGGTTTA.......................................................................................... 26 3 1 6.00 6 4 0 0 0 1 0 1
.........................................................TGTGACTGGTTGACCAGAGGA............................................................................................... 21 1 1 6.00 6 5 0 0 0 0 1 0
.........................................................TGTGACTGGTTGACCAGAGGGT.............................................................................................. 22 1 2 5.50 11 8 0 0 1 1 0 1
.........................................................TGTGACTGGTTGACCAGAGGGGAAA........................................................................................... 25 3 1 5.00 5 3 0 0 1 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGTAT............................................................................................ 24 3 4 4.75 19 13 0 0 3 1 2 0
.........................................................TGTGACTGGTTGACCAGAGGGGTATT.......................................................................................... 26 3 1 4.00 4 2 0 0 2 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCGT........................................................................................... 25 0 1 3.00 3 2 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGAA.............................................................................................. 22 2 1 3.00 3 1 0 0 1 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCG............................................................................................ 24 0 1 3.00 3 0 0 0 2 1 0 0
.........................................................TGTGACTGGTTGACCAGATGGG.............................................................................................. 22 1 1 3.00 3 3 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTTTAC......................................................................................... 27 3 1 2.00 2 0 2 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGACA........................................................................................... 25 3 1 2.00 2 1 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGTG............................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGT............................................................................................... 21 1 1 2.00 2 0 0 0 0 2 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAATT.......................................................................................... 26 3 1 2.00 2 2 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCATC.......................................................................................... 26 2 1 2.00 2 0 2 0 0 0 0 0
.........................................................TGTGACTGGTTGACTAGAGGGG.............................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGTGG.............................................................................................. 22 1 1 2.00 2 1 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGTT............................................................................................. 23 2 3 1.67 5 2 0 0 2 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTAA........................................................................................... 25 3 2 1.50 3 2 0 0 0 1 0 0
.........................................................TGTGACTGGTTTACCAGAGGGGAT............................................................................................ 24 3 2 1.50 3 2 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGTA............................................................................................. 23 2 3 1.33 4 1 0 0 1 0 2 0
.........................................................TGTGACTGGTTGACCAGAGGGGAG............................................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAG................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGACTC........................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0
.........................................................TATGACTGGTTGACCAGAGGGGTAT........................................................................................... 25 3 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTGTA.......................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGG............................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCGTTA......................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGATT............................................................................................ 24 3 2 1.00 2 1 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGATTA.......................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGGGGATT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
..........................................................GTGACTGGTTGACCAGAGG................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1
.........................................................TGTGACTGTTTGACCAGAGGGG.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTTGTTGACCAGAGGGG.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGGG............................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................GTGACTGGTTGACCAGAGGGGT............................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAGA........................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGGA............................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCATAGGGG.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGCGACTGGTTGACCAGAGG................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGTTTT........................................................................................... 25 3 2 1.00 2 1 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGATG........................................................................................... 25 3 1 1.00 1 0 0 0 0 0 1 0
.........................................................TGTGACTGGTTGACCAGAGA................................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAAAT........................................................................................... 25 3 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGATGGGCATC.......................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGGGGA............................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGACT........................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGGGGTTT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGATA............................................................................................ 24 3 1 1.00 1 0 0 0 0 0 1 0
.........................................................TGTGACTGGTTGACCAGAGGGTATT........................................................................................... 25 3 1 1.00 1 0 0 0 0 0 0 1
.........................................................TGTGACTGGTTGACCCGAGGGGGT............................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TATGACTGGTTGACCAGAGGG............................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0
........................................................CTGTGACTGGTTGACCAGAGGGGA............................................................................................. 24 2 1 1.00 1 0 0 0 0 1 0 0
........................................................GTGTGACTGGTTGACCAGAGGG............................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACTAGAGGGA.............................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCCGAGGGGTAT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAAGT........................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAAGG............................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGCTGACCAGAGG................................................................................................ 20 1 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTCTT.......................................................................................... 26 3 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGCGGGGT............................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGGAT........................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGAATA.......................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGGT............................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTCACCAGAGGGGTAT........................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................CGTGACTGGTTGACCAGAGGGG.............................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTGTAT......................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0
........................................................CTGTGACTGGTTGACCAGAGGGG.............................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACTAGATGGG.............................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGCGACTGGTTGACCAGAGGGGT............................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGGTTT.......................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCT............................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGCTT........................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGA.................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGACTGTTTGACCAGAGGGGTAT........................................................................................... 25 3 1 1.00 1 0 0 0 0 1 0 0
.........................................................TGTTACTGGTTGACCAGAGGGGTT............................................................................................ 24 3 2 0.50 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAATT........................................................................................... 25 3 2 0.50 1 0 0 0 0 1 0 0
.........................................................TGTGACAGGTTGACCAGAGGGGA............................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGG................................................................................................ 20 1 2 0.50 1 0 0 0 1 0 0 0
.........................................................TGTGACTGTTTGACCAGAGGGGTTT........................................................................................... 25 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGTCTGGTTGACCAGAGGGG.............................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGTGT............................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGAG............................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACTAGAGGGGA............................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGCTC............................................................................................ 24 3 2 0.50 1 0 1 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGATGG............................................................................................... 21 1 2 0.50 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGGGTTC........................................................................................... 25 3 2 0.50 1 0 1 0 0 0 0 0
.........................................................TGTGACCGGTTGACCAGAGG................................................................................................ 20 1 3 0.33 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGATG................................................................................................ 20 1 3 0.33 1 0 0 0 1 0 0 0
.........................................................TGTGACTGGTTGACCAGAGTGGTA............................................................................................ 24 3 4 0.25 1 0 0 0 0 1 0 0
.........................................................TGTGACTGTTTTACCAGAGGGG.............................................................................................. 22 2 4 0.25 1 1 0 0 0 0 0 0
.........................................................TGTGACTTGTTGACCAGAGGGGAT............................................................................................ 24 3 4 0.25 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTTACCAGAGGGT.............................................................................................. 22 2 4 0.25 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGTGA.............................................................................................. 22 2 4 0.25 1 0 0 0 0 1 0 0
.........................................................TGTGACTGGTTGACCAGAGGGTAA............................................................................................ 24 3 5 0.20 1 0 0 0 0 1 0 0
.........................................................AGTGACTGGTTGACCAGAGGGAT............................................................................................. 23 3 5 0.20 1 1 0 0 0 0 0 0
.........................................................TGTGACTGGTTGACCAGAGGAAA............................................................................................. 23 3 6 0.17 1 0 0 0 0 1 0 0
...............................................................................CGTGCACTGTGTTCACCATC.......................................................................... 20 2 6 0.17 1 0 0 1 0 0 0 0

Anti-sense strand reads

GGGACCCGGGGTCCGGCTGAAGGTCTTCTCTACAACCACAGTCGTGGCAGGTCCCACACACTGACCAACTGGTCTCCCCGCACGTGACACAAGTGGGACACCCGGTGGATCAGTGGTTGGGAGTCGTAGTGAGGGTGGGGTCCTTCTGAAAGGTCTCGAGGGTGGCTGAGACC

***********************************((((..((....((..(((((..((((((((.((.(((.((((....(((...)))...)))).)))..)).))))))))..)))))..))....))..))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:30 PM