ID:

mml-mir-1323

 Coordinate:

chr19:59503727-59503834 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.9 -50.1 -49.9

Sense Strand Reads

AGTGAACCCTAGTGTGAGGTAACCATGTAGGAAGAGTTTGAGGTCAGACATGACATTCAGACTGATGTCCTCAAAACTGAGGGGCATTTTCTGTGATTTGAAAGGAAAGTGCACCCAGTTTTGGGGATGTCAATTGTGAATACTCATCATAACCCATTCCCCAGTCCCCCATCGCATTGCACCACATGGATGCATGTAGTGGACTGGC

***********************************....((((...(((((((.(((((...(((((((((((((((((.((.(((((((((...........))))))))).)))))))))))))))))))....)))))..))))................)))..)).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis		 SRR116839

testes		 SRR116842

seminal vesicle		 SRR116841

prostate		 SRR116843

cortex
......................................................................TCAAAACTGAGGGGCATTTTCT.................................................................................................................... 22 0 1 1601.00 1601 941 527 66 56 11
......................................................................TCAAAACTGAGGGGCATTTT...................................................................................................................... 20 0 1 873.00 873 784 27 37 23 2
......................................................................TCAAAACTGAGGGGCATTT....................................................................................................................... 19 0 1 211.00 211 188 10 10 3 0
......................................................................TCAAAACTGAGGGGCATTTTC..................................................................................................................... 21 0 1 197.00 197 138 51 5 3 0
......................................................................TCAAAACTGAGGGGCATTTTT..................................................................................................................... 21 1 1 77.00 77 69 4 3 1 0
......................................................................TCAAAACTGAGGGGCATTTTCA.................................................................................................................... 22 1 1 43.00 43 26 14 2 1 0
......................................................................TCAAAACTGAGGGGCATTTTCTT................................................................................................................... 23 1 1 21.00 21 15 6 0 0 0
......................................................................TCAAAACTGATGGGCATTTTCT.................................................................................................................... 22 1 1 17.00 17 6 11 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTA..................................................................................................................... 21 1 2 16.50 33 25 4 2 1 1
......................................................................TCAAAACTGAGGGGCATT........................................................................................................................ 18 0 1 16.00 16 15 0 0 1 0
......................................................................TCAAAACTGAGGGGCATTTTCTA................................................................................................................... 23 1 1 16.00 16 6 10 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTTT.................................................................................................................. 24 1 1 15.00 15 11 2 0 2 0
......................................................................TCAAAACTGAGGGGCATTTTTT.................................................................................................................... 22 1 1 11.00 11 10 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTAA.................................................................................................................... 22 2 2 9.50 19 15 2 2 0 0
......................................................................TCAAAACTGAGGGGCCTTTTCT.................................................................................................................... 22 1 1 8.00 8 5 3 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTAT.................................................................................................................... 22 1 1 7.00 7 6 0 0 1 0
......................................................................TCAAAACTGAGGGGCATTTA...................................................................................................................... 20 1 2 5.50 11 9 0 2 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTAA.................................................................................................................. 24 2 1 5.00 5 4 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTAT.................................................................................................................. 24 1 1 4.00 4 3 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTGT.................................................................................................................. 24 0 1 4.00 4 2 2 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTTA.................................................................................................................... 22 2 1 4.00 4 4 0 0 0 0
......................................................................TCAAATCTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 4.00 4 0 4 0 0 0
......................................................................TCAAAACTGACGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 0 3 0 0 0
......................................................................TCAAAACTGAGGGGCCTTTT...................................................................................................................... 20 1 1 3.00 3 3 0 0 0 0
......................................................................TCAAAACTGAAGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 0 3 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTG..................................................................................................................... 21 1 1 3.00 3 2 0 0 1 0
......................................................................TCAAAACTGCGGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 2 1 0 0 0
......................................................................TCCAAACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 3 0 0 0 0
......................................................................TCAAACCTGAGGGGCATTTTCT.................................................................................................................... 22 1 2 3.00 6 0 6 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTG................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0
......................................................................CCAAAACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 1 2 0 0 0
......................................................................TCAAAACTGAGGGGCCTTTTC..................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0
......................................................................TCAGAACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 3.00 3 2 1 0 0 0
......................................................................TCAAAACTGCGGGGCATTTT...................................................................................................................... 20 1 1 3.00 3 3 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCAA................................................................................................................... 23 2 2 2.50 5 4 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTAT...................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0
.........................................................................................................AAAGTGCACCCAGTTTTGGGT.................................................................................. 21 1 1 2.00 2 0 2 0 0 0
......................................................................TCAAAACTGAGGGTCATTTTCT.................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0
.......................................................................CAAAACTGAGGGGCATTTTCT.................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
......................................................................TCAAAACTTAGGGGCATTTTCT.................................................................................................................... 22 1 1 2.00 2 2 0 0 0 0
......................................................................TCAACACTGAGGGGCATTTT...................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0
......................................................................TCAAAACTGAGGTGCATTTTCT.................................................................................................................... 22 1 1 2.00 2 0 2 0 0 0
......................................................................TCAAAAATGAGGGGCATTTT...................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0
......................................................................TCAAAACTGATGGGCATTTT...................................................................................................................... 20 1 3 1.67 5 5 0 0 0 0
......................................................................TCAAAACTGAGGAGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGACATTTTCT.................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
......................................................................TCAAAACTGACGGGCATTTTCA.................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTTTA................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGATGGGCATTTTC..................................................................................................................... 21 1 2 1.00 2 1 1 0 0 0
......................................................................CCAAAACTGAGGGGCATTTT...................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0
......................................................................TCAAAACTGAGGGGCATTTTCG.................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
........................................................................AAAACTGAGGGGCATTTTCT.................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGTGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTGTAAA............................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGTCATTTTC..................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTG...................................................................................................................... 20 1 2 1.00 2 2 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTAG.................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0
.....................................................................CTCAAAACTGAGGGGCATTTT...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTTAGGGGCATTTTC..................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTTTC................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCAATTTCT.................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
......................................................................ACAAAACTGAGGGGCATTTTC..................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................AAAACTGAGGGGCATTTT...................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
......................................................................ACAAAACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTGTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAACACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCAT......................................................................................................................... 17 0 3 1.00 3 3 0 0 0 0
......................................................................TCAAAACTGAGGGTCATTTT...................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAGACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
......................................................................TCAAAACTGACGGGCATTTTCTT................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTTTT................................................................................................................. 25 2 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTGA.................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
......................................................................TCGAAACTGAGGGGCATTTT...................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTTA.................................................................................................................. 24 2 1 1.00 1 1 0 0 0 0
......................................................................TCAAAGCTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
......................................................................TCGAAACTGAGGGGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATATTCT.................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
......................................................................TCAAAACTGAGGCGCATTTTCT.................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTCCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTGGC................................................................................................................. 25 2 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATCTTCT.................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTGA.................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTCTTGCA................................................................................................................ 26 3 1 1.00 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTTTTT................................................................................................................... 23 2 3 0.67 2 2 0 0 0 0
......................................................................TCAAAACTGAGTGGCATTTT...................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0
......................................................................TCAAAACTGAGGTGCATTTT...................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTAT..................................................................................................................... 21 2 5 0.60 3 2 0 1 0 0
......................................................................TCAAAACTGAGGGGCATTTC...................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
........................................................................AAAACTGAGGGGCATTTTCTTC.................................................................................................................. 22 2 2 0.50 1 0 1 0 0 0
......................................................................TCAAACCTGAGGGGCATTTT...................................................................................................................... 20 1 2 0.50 1 0 1 0 0 0
......................................................................TCAAATCTGAGGGGCATTTTC..................................................................................................................... 21 1 2 0.50 1 0 1 0 0 0
......................................................................TCACAACTGAGGGGCATTTTC..................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
......................................................................TCAAAAATGAGGGGCATTTTCA.................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTCC..................................................................................................................... 21 1 2 0.50 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTTCT..................................................................................................................... 21 2 6 0.33 2 2 0 0 0 0
......................................................................TCAAAAATGATGGGCATTTTCT.................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCCTT........................................................................................................................ 18 1 3 0.33 1 1 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTCT...................................................................................................................... 20 1 6 0.33 2 2 0 0 0 0
......................................................................TCCAAACTGAGGGGCATTTT...................................................................................................................... 20 1 7 0.29 2 2 0 0 0 0
......................................................................TCAAAACTGAGGGGCATTAA...................................................................................................................... 20 2 11 0.27 3 3 0 0 0 0
..................................................................GAAGTCAAAACTGAGGGGCATTTTC..................................................................................................................... 25 3 4 0.25 1 0 1 0 0 0
......................................................................TCAAAACTGACGGGCATTTTT..................................................................................................................... 21 2 4 0.25 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTAG..................................................................................................................... 21 2 5 0.20 1 1 0 0 0 0
......................................................................ACAAAACTGAGGGGCATTTT...................................................................................................................... 20 1 6 0.17 1 1 0 0 0 0
........................................................................AAAACTGAGGGGCATT........................................................................................................................ 16 0 8 0.13 1 1 0 0 0 0
......................................................................TCAAAGCTGAGGGGCCTTTT...................................................................................................................... 20 2 10 0.10 1 0 1 0 0 0
......................................................................TCAAAACTGAGGGGCATTTGA..................................................................................................................... 21 2 10 0.10 1 1 0 0 0 0
........................................................................AAAACTGAGGGGCATTTA...................................................................................................................... 18 1 19 0.05 1 1 0 0 0 0

Anti-sense strand reads

TCACTTGGGATCACACTCCATTGGTACATCCTTCTCAAACTCCAGTCTGTACTGTAAGTCTGACTACAGGAGTTTTGACTCCCCGTAAAAGACACTAAACTTTCCTTTCACGTGGGTCAAAACCCCTACAGTTAACACTTATGAGTAGTATTGGGTAAGGGGTCAGGGGGTAGCGTAACGTGGTGTACCTACGTACATCACCTGACCG

***********************************....((((...(((((((.(((((...(((((((((((((((((.((.(((((((((...........))))))))).)))))))))))))))))))....)))))..))))................)))..)).))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:16 PM