ID:

mml-mir-1284

 Coordinate:

chr2:66131428-66131537 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.9 -37.6 -37.1 -37.1

Sense Strand Reads

TGTAAATTATTTTAATGCTGCATTTCTGCCCAAACCTCATGATTTTGATATATAAGCCAGTTTAATGTTTTCTGTACAGACCCTGGCTTTTCTTAAATTTTATATATTGGAAAGCCCATGTTTGTATTGGAAACTGCTGGTTTCTTTCATATTGAAAATCTGTCTTGCGTGGCGTGATGCCATGTGGCAAAGGAGTAGTTTGACCAGAGT

***********************************...(((((((((((((..((((((((.....((((((.((((((((...((((((((................))))))))...)))))))).)))))).)))))))).....))))).)))))).............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116840

epididymis		 SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116839

testes		 SRR116841

prostate
......................................................................TCTGTACAGACCCTGGCTTTTC...................................................................................................................... 22 0 1 7.00 7 2 4 0 1 0
......................................................................TCTGTACAGACCCTGGCTTTT....................................................................................................................... 21 0 1 5.00 5 4 0 1 0 0
......................................................................TCTGTACAGACCCTGGCTTT........................................................................................................................ 20 0 1 5.00 5 2 2 1 0 0
......................................................................TCTGTACAGACCCTGGCTTTTCT..................................................................................................................... 23 0 1 2.00 2 0 0 1 0 1
......................................................................TCTGTACAGACCCTGGCTTTTCA..................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0
......................................................................TCTGTACAGACCCTGGCTTTA....................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
......................................................................TCTGTACAGCCCCTGGCTTT........................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0
......................................................................TCTGTACAGACCCTGGCTAA........................................................................................................................ 20 2 9 0.11 1 1 0 0 0 0

Anti-sense strand reads

ACATTTAATAAAATTACGACGTAAAGACGGGTTTGGAGTACTAAAACTATATATTCGGTCAAATTACAAAAGACATGTCTGGGACCGAAAAGAATTTAAAATATATAACCTTTCGGGTACAAACATAACCTTTGACGACCAAAGAAAGTATAACTTTTAGACAGAACGCACCGCACTACGGTACACCGTTTCCTCATCAAACTGGTCTCA

***********************************...(((((((((((((..((((((((.....((((((.((((((((...((((((((................))))))))...)))))))).)))))).)))))))).....))))).)))))).............))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:19 PM