ID:

mml-mir-125b-2

 Coordinate:

chr3:30407691-30407779 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.4 -35.8 -35.8
mature

  1. mml-mir-125b-1  chr14:123063628-123063649 -
  2. mml-mir-125b-2  chr3:30407742-30407763 -
star

Sense Strand Reads

GTAATTTCTAAGCTATCCTTATTTCTGGAAGAAGAATTCTCCTGCATCAAACCAGACTTTTCCTAGTCCCTGAGACCCTAACTTGTGAGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGGGAACCAGCAGCTTTGGACCTTACTGATTGTCTGCAGTTACCACCAGAACAAA

***************************************************((...((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).)))).))..************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116841

prostate		 SRR116840

epididymis		 SRR116845

epididymis		 SRR116842

seminal vesicle		 SRR116844

epididymis		 SRR116839

testes
..................................................................TCCCTGAGACCCTAACTTGTGA..................................................................................................... 22 0 2 31620.00 63240 31864 16436 9241 10 5278 5 406
..................................................................TCCCTGAGACCCTAACTTGTGAATC.................................................................................................. 25 3 2 9117.00 18234 0 0 0 10420 0 7814 0
..................................................................TCCCTGAGACCCTAACTTGTG...................................................................................................... 21 0 2 6657.50 13315 6281 3053 2745 0 1178 1 57
..................................................................TCCCTGAGACCCTAACTTGT....................................................................................................... 20 0 2 4444.00 8888 4283 2152 1649 1 765 0 38
..................................................................TCCCTGAGACCCTAACTTGTGAA.................................................................................................... 23 1 2 3429.00 6858 2878 2120 1027 64 659 61 49
..................................................................TCCCTGAGACCCTAACTTGTGAAA................................................................................................... 24 2 2 1490.50 2981 1656 671 386 0 256 2 10
..................................................................TCCCTGAGACCCTAACTTGTGT..................................................................................................... 22 1 2 565.50 1131 345 406 260 0 104 1 15
..................................................................TCCCTGAGACCCTAACTTGTTA..................................................................................................... 22 1 2 505.50 1011 588 240 171 0 7 0 5
..................................................................TCCCTGAGACCCTAACTTG........................................................................................................ 19 0 2 297.50 595 220 131 178 0 62 1 3
..................................................................TCCCTGAGACCCTAACTTTTGA..................................................................................................... 22 1 2 271.00 542 251 194 90 0 5 0 2
..................................................................TCCCTGCGACCCTAACTTGTGA..................................................................................................... 22 1 2 238.00 476 349 67 47 0 10 0 3
..................................................................TCCCTGAGACCCTAACTTGTGAAATC................................................................................................. 26 3 2 179.50 359 1 0 0 208 0 150 0
..................................................................TCCCTGAGACCCTAACTTGTT...................................................................................................... 21 1 2 165.50 331 178 72 73 1 5 1 1
..................................................................TCCCTGAGACCCTAACTTGTGAAAA.................................................................................................. 25 3 3 139.67 419 194 125 58 1 41 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAT................................................................................................... 24 2 2 131.00 262 25 26 10 125 5 70 1
..................................................................TCCCTGAGACCCTAACTT......................................................................................................... 18 0 2 118.50 237 71 83 48 0 34 0 1
..................................................................TCCCTGAGACCCTAACTTGA....................................................................................................... 20 1 2 116.50 233 87 60 68 0 18 0 0
..................................................................TCCCTGAGACCCTCACTTGTGA..................................................................................................... 22 1 2 116.00 232 94 103 27 0 8 0 0
..................................................................TCCCTGAGACTCTAACTTGTGA..................................................................................................... 22 1 2 112.50 225 92 77 29 0 25 0 2
..................................................................TCCCTGAGACCCTAACTTGTATC.................................................................................................... 23 3 7 101.57 711 0 0 0 279 0 432 0
..................................................................TCCCTGATACCCTAACTTGTGA..................................................................................................... 22 1 2 98.50 197 113 47 28 0 9 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGAC................................................................ 20 0 1 94.00 94 29 26 22 0 16 0 1
..................................................................TCCCTGAGACCCTAACTTGTAA..................................................................................................... 22 1 2 93.50 187 72 70 27 0 16 0 2
.........................................................................................................ACAAGTCAGGCTCTTGGGACCT.............................................................. 22 0 1 93.00 93 63 13 10 0 5 0 2
..................................................................TCCCTGAGACCCTAACTTGTA...................................................................................................... 21 1 2 88.00 176 73 58 30 1 14 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCATC............................................................ 24 3 1 80.00 80 0 0 0 38 0 42 0
..................................................................TCCCTGAGACCCTAACTTGTGAGA................................................................................................... 24 1 1 79.00 79 39 24 11 0 5 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGATC................................................................................................. 26 2 1 77.00 77 0 0 0 42 0 35 0
..................................................................TCCCTGAGACCCTAACTTGTGAAC................................................................................................... 24 2 2 71.50 143 6 3 0 79 0 55 0
..................................................................TCCCTGAGACCCTAACTTGTGAG.................................................................................................... 23 0 1 71.00 71 27 28 10 0 6 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAG................................................................................................... 24 1 2 71.00 142 81 35 15 0 10 0 1
..................................................................TCCCTGAGCCCCTAACTTGTGA..................................................................................................... 22 1 2 70.50 141 11 95 31 0 2 0 2
..................................................................TCCCTGAGACCCTAACTTTTG...................................................................................................... 21 1 2 69.00 138 56 50 32 0 0 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACC............................................................... 21 0 1 68.00 68 33 17 9 0 8 0 1
.......................................................................................................TCACAAGTCAGGCTCTTGGGACATC............................................................. 25 2 1 66.00 66 0 0 0 22 0 44 0
....................................................................CCTGAGACCCTAACTTGTGA..................................................................................................... 20 0 2 65.50 131 42 27 14 0 48 0 0
..................................................................TCCCTGAGACCCTAACTTTT....................................................................................................... 20 1 2 63.00 126 55 40 30 0 1 0 0
..................................................................TCCCTGAGACCGTAACTTGTGA..................................................................................................... 22 1 2 59.00 118 118 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAAC........................................................................................................... 16 0 6 58.67 352 33 146 82 3 85 3 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACATC............................................................. 23 2 1 58.00 58 0 0 0 22 0 36 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACA............................................................... 21 1 1 57.00 57 23 16 10 0 8 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAAAA................................................................................................. 26 3 1 54.00 54 23 17 8 0 6 0 0
..................................................................TCCCTGAGACCCTAACTCGTGA..................................................................................................... 22 1 2 53.00 106 73 17 7 0 9 0 0
..................................................................TCCCTGAGACCCTAACTTGTTAA.................................................................................................... 23 2 2 45.00 90 41 27 20 0 2 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTATC........................................................... 25 2 1 43.00 43 0 0 0 18 0 25 0
..................................................................TCCCTGAGACCCTAACTTGTGACTC.................................................................................................. 25 3 6 42.33 254 0 0 0 148 0 106 0
..................................................................TCCCTGATACCCTAACTTGTG...................................................................................................... 21 1 2 41.00 82 52 17 9 0 4 0 0
..................................................................TCCCTGAGACCTTAACTTGTGA..................................................................................................... 22 1 3 38.00 114 73 19 12 0 10 0 0
..................................................................TCCCTGAGACCATAACTTGTGA..................................................................................................... 22 1 2 35.00 70 62 2 4 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTA........................................................................................................ 19 1 3 33.67 101 21 53 14 0 13 0 0
..................................................................TCCCTGCGACCCTAACTTGT....................................................................................................... 20 1 2 33.50 67 48 11 7 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGA................................................................. 19 0 1 33.00 33 6 5 17 0 4 0 1
..................................................................TCCCTGAGACCCTAACTTGTGAC.................................................................................................... 23 1 2 32.00 64 13 11 7 19 1 13 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTTT............................................................ 24 2 1 32.00 32 18 5 4 0 5 0 0
..................................................................TCCCTGCGACCCTAACTTGTG...................................................................................................... 21 1 2 30.50 61 46 3 11 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTTTGAA.................................................................................................... 23 2 2 30.00 60 20 24 16 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTTTTA..................................................................................................... 22 2 3 29.33 88 47 26 13 0 0 0 2
..................................................................TCCCTGAGACCCTACCTTGTGA..................................................................................................... 22 1 2 28.00 56 29 12 8 0 7 0 0
..................................................................TCCCTGAGACCCTCACTTGTG...................................................................................................... 21 1 2 28.00 56 17 31 6 0 2 0 0
..................................................................TCCCTGATACCCTAACTTGT....................................................................................................... 20 1 2 27.00 54 26 12 15 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTT............................................................. 23 1 1 26.00 26 19 5 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTCTGA..................................................................................................... 22 1 2 24.50 49 32 9 6 0 2 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGAC................................................................ 22 0 1 23.00 23 12 5 3 0 3 0 0
..................................................................TCCCTGAGACTCTAACTTGTGAA.................................................................................................... 23 2 3 23.00 69 20 26 13 0 10 0 0
..................................................................TCCCTGAGACCCTAACTTGATC..................................................................................................... 22 3 16 22.94 367 0 0 0 227 0 140 0
..................................................................CCCCTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 22.50 45 20 11 6 0 7 0 1
................................................................AATCCCTGAGACCCTAACTTGTGA..................................................................................................... 24 1 2 22.00 44 20 10 11 0 3 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGA................................................................. 21 0 1 21.00 21 10 5 3 0 3 0 0
......................................................................................................ATCACAAGTCAGGCTCTTGGGACATC............................................................. 26 2 1 21.00 21 0 0 0 14 0 7 0
..................................................................TCCCTGAGACCCTAACCTGTGA..................................................................................................... 22 1 2 20.50 41 25 5 9 0 2 0 0
..................................................................TCCCCGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 20.50 41 24 12 2 0 3 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAATT.................................................................................................. 25 2 2 20.50 41 1 0 0 29 0 11 0
..................................................................TCCCTGAGACCCTAACTTGTGC..................................................................................................... 22 1 2 20.50 41 22 10 6 0 2 0 1
..................................................................TCCCTGAGACCCCAACTTGTGA..................................................................................................... 22 1 2 20.00 40 25 9 5 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGCGA..................................................................................................... 22 1 2 19.50 39 19 7 8 0 5 0 0
...................................................................CCCTGAGACCCTAACTTGTGA..................................................................................................... 21 0 2 19.50 39 18 9 10 0 1 0 1
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTAT............................................................ 24 1 1 19.00 19 10 3 1 0 4 0 1
..................................................................TCCCTGGGACCCTAACTTGTGA..................................................................................................... 22 1 2 19.00 38 21 13 3 0 1 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGACA............................................................... 23 1 1 18.00 18 9 6 2 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACT............................................................... 21 1 1 18.00 18 0 11 3 0 4 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGA.................................................................................................. 25 2 2 17.50 35 20 6 4 0 4 0 1
..................................................................TCCCTGAGACCCTAACTTGTTAAA................................................................................................... 24 3 2 17.00 34 30 3 1 0 0 0 0
..................................................................TCCCTGCGACCCTAACTTGTGAA.................................................................................................... 23 2 2 16.50 33 25 2 5 0 1 0 0
..................................................................TCCCTGAGACCCTCACTTGTGAA.................................................................................................... 23 2 2 16.50 33 14 16 3 0 0 0 0
..................................................................TCCCTGAGAACCTAACTTGTGA..................................................................................................... 22 1 2 15.50 31 14 13 2 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGTC.................................................................................................. 25 2 1 15.00 15 1 0 0 8 0 6 0
..................................................................TCCCTGAGACCCTAACTTGTGACGGG................................................................................................. 26 3 2 14.50 29 19 4 2 0 4 0 0
..................................................................TCCCTGAGACCCTAACTTGTGTC.................................................................................................... 23 2 2 14.00 28 0 0 0 13 0 15 0
.........................................................................................................ACAAGTCAGGCTCTTGGGAT................................................................ 20 1 1 14.00 14 1 5 7 0 1 0 0
..................................................................TCCCTGAGGCCCTAACTTGTGA..................................................................................................... 22 1 2 13.50 27 12 8 3 0 4 0 0
..................................................................TCCCTGAGACCCTGACTTGTGA..................................................................................................... 22 1 2 13.50 27 9 9 3 0 6 0 0
..................................................................TCCCTGAGACCCTAACT.......................................................................................................... 17 0 4 13.50 54 8 20 14 0 12 0 0
..................................................................TCCCTGAGCCCCTAACTTGTG...................................................................................................... 21 1 2 13.00 26 4 17 5 0 0 0 0
......................................................................................................ATCACAAGTCAGGCTCTTGGGA................................................................. 22 0 1 13.00 13 9 2 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGG..................................................................................................... 22 1 2 12.50 25 9 4 8 0 4 0 0
..................................................................TCCCTGAGACCCTAACTTGTTT..................................................................................................... 22 2 3 12.33 37 11 13 13 0 0 0 0
..................................................................TCCCTTAGACCCTAACTTGTGA..................................................................................................... 22 1 2 12.00 24 11 3 6 0 4 0 0
..................................................................TCCCTCAGACCCTAACTTGTGA..................................................................................................... 22 1 2 12.00 24 9 3 3 0 2 0 7
..................................................................TCCCTGAGACCGTAACTTGTG...................................................................................................... 21 1 2 12.00 24 23 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGT................................................................................................... 24 1 1 12.00 12 3 6 1 0 2 0 0
..................................................................TCCCTGAGACCCTCACTTGT....................................................................................................... 20 1 3 11.67 35 13 13 6 0 3 0 0
..................................................................TCCCTGAGACTCTAACTTGTG...................................................................................................... 21 1 3 11.67 35 14 9 8 0 4 0 0
..................................................................TCCCTGATACCCTAACTTGTGAA.................................................................................................... 23 2 2 11.50 23 14 4 4 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTTC..................................................................................................... 22 2 2 11.50 23 0 0 0 14 0 9 0
.........................................................................................................ACAAGTCAGGCTCTTGGGAA................................................................ 20 1 2 11.00 22 6 8 4 0 3 0 1
..................................................................TCCCTGAGACTCTAACTTGT....................................................................................................... 20 1 3 10.33 31 9 12 3 0 7 0 0
..................................................................TCCCTGAGACCCTAACTTTTGAAA................................................................................................... 24 3 3 10.00 30 12 11 6 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTA............................................................. 23 0 1 10.00 10 5 3 1 0 0 1 0
..................................................................TCCCTGAGACCCTAACTCGTG...................................................................................................... 21 1 2 10.00 20 17 2 1 0 0 0 0
..................................................................TCCCTGAGACCCTACCTTGTG...................................................................................................... 21 1 2 10.00 20 7 6 4 0 3 0 0
....................................................................CCTGAGACCCTAACTTGTG...................................................................................................... 19 0 2 10.00 20 3 5 3 0 9 0 0
..................................................................TCCCTGACACCCTAACTTGTGA..................................................................................................... 22 1 2 9.50 19 13 2 2 0 2 0 0
..................................................................ACCCTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 9.50 19 13 3 0 0 3 0 0
..................................................................TCCCTGAGACCCTAACTTGTGTA.................................................................................................... 23 2 3 9.33 28 4 13 8 0 2 1 0
..................................................................TCCCTGAGACCCTAACTTAA....................................................................................................... 20 2 9 9.11 82 17 42 16 0 7 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGGGT................................................................................................ 27 3 2 9.00 18 8 4 3 0 3 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACAA.............................................................. 22 2 1 9.00 9 3 2 1 0 3 0 0
..................................................................TCCCTGAGATCCTAACTTGTGA..................................................................................................... 22 1 3 8.67 26 13 9 3 0 1 0 0
....................................................................CCTGAGACCCTAACTTGT....................................................................................................... 18 0 2 8.50 17 2 4 4 0 7 0 0
..................................................................TCCCTGAGACCCTAATTTGTGA..................................................................................................... 22 1 2 8.50 17 8 2 3 0 4 0 0
..................................................................TCCCTGAGACCCTAACTTGTCA..................................................................................................... 22 1 2 8.50 17 10 3 3 0 1 0 0
..................................................................TCCCTTAGACCCTAACTTGTG...................................................................................................... 21 1 2 8.00 16 7 4 4 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGG................................................................................................... 24 0 1 8.00 8 5 2 0 0 1 0 0
..................................................................TCCCTGAGCCCCTAACTTGTGAA.................................................................................................... 23 2 2 8.00 16 3 8 4 0 0 1 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCAT............................................................. 23 2 1 8.00 8 3 5 0 0 0 0 0
..................................................................TCCCTGAGCCCCTAACTTGT....................................................................................................... 20 1 3 7.67 23 3 14 6 0 0 0 0
..................................................................TCCCTGAGACCTTAACTTGTG...................................................................................................... 21 1 3 7.67 23 9 6 3 0 5 0 0
..................................................................TCCCTGAGACCTTAACTTGT....................................................................................................... 20 1 3 7.67 23 12 4 6 0 1 0 0
..................................................................TCCCTGAGACCCTAGCTTGTGA..................................................................................................... 22 1 2 7.50 15 6 3 2 0 4 0 0
....................................................................CCTGAGACCCTAACTTGTGAATC.................................................................................................. 23 3 10 7.30 73 0 0 0 34 0 39 0
..................................................................TCCCTGAGACCGTAACTTGTGAA.................................................................................................... 23 2 2 7.00 14 14 0 0 0 0 0 0
..................................................................TCCCTGAGACACTAACTTGTGA..................................................................................................... 22 1 2 7.00 14 4 6 1 0 1 0 2
......................................................................................................ATCACAAGTCAGGCTCTTGGGAC................................................................ 23 0 1 7.00 7 4 1 1 0 1 0 0
..................................................................TCCCTAAGACCCTAACTTGTGA..................................................................................................... 22 1 2 7.00 14 6 3 3 0 2 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGAA................................................................ 22 1 1 7.00 7 0 3 3 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGC................................................................................................... 24 1 1 7.00 7 5 2 0 0 0 0 0
................................................................AATCCCTGAGACCCTAACTTGTG...................................................................................................... 23 1 2 7.00 14 7 4 3 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACATC................................................................................................. 26 3 2 7.00 14 0 0 0 9 0 5 0
..................................................................TCCCTGAGACCCTTACTTGTGA..................................................................................................... 22 1 2 7.00 14 6 7 1 0 0 0 0
..................................................................TTCCTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 6.50 13 4 6 1 0 2 0 0
...................................................................CCCTGAGACCCTAACTTGTGAA.................................................................................................... 22 1 2 6.50 13 5 4 1 1 2 0 0
..................................................................TCCCTGCGACCCTAACTTGTGAAA................................................................................................... 24 3 2 6.50 13 8 2 2 0 1 0 0
..................................................................TCCCTGAGACCGTAACTTGT....................................................................................................... 20 1 2 6.50 13 13 0 0 0 0 0 0
..................................................................TCCCTTAGACCCTAACTTGT....................................................................................................... 20 1 2 6.50 13 3 5 3 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAAGA................................................................................................. 26 3 1 6.00 6 5 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGGGA..................................................................................................... 22 1 2 6.00 12 9 1 0 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGAA................................................................................................. 26 2 1 6.00 6 5 0 1 0 0 0 0
..................................................................TCCCTGCTACCCTAACTTGTGA..................................................................................................... 22 2 3 6.00 18 12 1 3 0 2 0 0
..................................................................TCCTTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 6.00 12 3 3 4 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGCG...................................................................................................... 21 1 2 6.00 12 7 1 2 0 2 0 0
..................................................................TCCCTGAGACCCTAACTAGTGA..................................................................................................... 22 1 2 5.50 11 8 1 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTAAA.................................................................................................... 23 2 2 5.50 11 5 2 2 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGC.................................................................................................. 25 2 2 5.50 11 4 3 2 0 1 0 1
..................................................................TCCCTGAGACCCCAACTTGTG...................................................................................................... 21 1 2 5.50 11 4 3 1 0 3 0 0
..................................................................TCCCTGAGCCCCTCACTTGTGA..................................................................................................... 22 2 3 5.33 16 2 12 2 0 0 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGG.................................................................. 20 0 1 5.00 5 5 0 0 0 0 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGG.................................................................. 18 0 1 5.00 5 1 3 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACA................................................................................................... 24 2 2 5.00 10 6 1 2 0 0 1 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTAA............................................................ 24 1 1 5.00 5 3 2 0 0 0 0 0
......................................................................................................ATCACAAGTCAGGCTCTTGGGACA............................................................... 24 1 1 5.00 5 3 1 0 0 1 0 0
..................................................................TCCCTGAGACCCTGACTTGT....................................................................................................... 20 1 2 5.00 10 6 1 1 0 2 0 0
.........................................................................................................ACAAGTCAGGCTCTTTGGAC................................................................ 20 1 1 5.00 5 2 2 1 0 0 0 0
...................................................................TCCTGAGACCCTAACTTGTGA..................................................................................................... 21 1 2 5.00 10 8 2 0 0 0 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGACG............................................................... 23 1 1 5.00 5 2 2 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACCTGTG...................................................................................................... 21 1 2 5.00 10 7 2 1 0 0 0 0
...................................................................CCCTGAGACCCTAACTTGTGAAT................................................................................................... 23 2 2 5.00 10 4 6 0 0 0 0 0
......................................................................................................ATCACAAGTCAGGCTCTTGGGAATC.............................................................. 25 3 3 5.00 15 0 0 0 6 0 9 0
..................................................................TCCCTGAGACCCTAACTTGTGAGAAA................................................................................................. 26 2 1 5.00 5 2 1 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTT........................................................................................................ 19 1 4 5.00 20 3 8 8 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGGGC................................................................................................. 26 2 1 5.00 5 1 3 0 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGAGA..................................................................................................... 22 1 2 5.00 10 5 3 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAACC.................................................................................................. 25 3 2 5.00 10 0 0 0 3 1 6 0
..................................................................TCCCTGAGACCCTAACTTGTGTAA................................................................................................... 24 3 4 4.75 19 5 10 2 0 2 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGAATC.............................................................. 24 3 3 4.67 14 0 0 0 2 0 12 0
..................................................................TCTCTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 4.50 9 3 5 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTAT....................................................................................................... 20 1 2 4.50 9 2 3 3 0 1 0 0
..................................................................TCCCCGAGACCCTAACTTGTG...................................................................................................... 21 1 2 4.50 9 3 3 2 0 1 0 0
..................................................................TCCCTGAGACCCTAACATGTGA..................................................................................................... 22 1 2 4.50 9 4 3 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAAT.................................................................................................. 25 2 2 4.50 9 2 1 0 2 1 3 0
..................................................................TCCCTGAGACCCTAACTTGTAT..................................................................................................... 22 2 2 4.50 9 1 1 2 1 2 2 0
..................................................................TCCCTGAGACCCTACCTTGT....................................................................................................... 20 1 2 4.50 9 6 3 0 0 0 0 0
.................................................................ATCCCTGAGACCCTAACTTGTG...................................................................................................... 22 1 2 4.50 9 6 1 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTCAA.................................................................................................... 23 2 2 4.50 9 8 0 0 0 1 0 0
..................................................................TCCCTGAAACCCTAACTTGTGA..................................................................................................... 22 1 2 4.00 8 6 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGGC.................................................................................................. 25 1 1 4.00 4 3 1 0 0 0 0 0
..................................................................TCCCTGAGATCCTAACTTGT....................................................................................................... 20 1 3 4.00 12 4 3 3 0 2 0 0
..................................................................TCCCCGAGACCCTAACTTGTGAA.................................................................................................... 23 2 2 4.00 8 5 2 0 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGATC............................................................... 21 1 1 4.00 4 0 0 0 2 0 2 0
..................................................................TCCCTGAGACCCAAACTTGTGA..................................................................................................... 22 1 2 4.00 8 4 1 2 0 1 0 0
..................................................................TCCCTGAGATCCTAACTTGTG...................................................................................................... 21 1 3 4.00 12 5 4 1 0 2 0 0
..................................................................TCCCTGTGACCCTAACTTGTGA..................................................................................................... 22 1 2 4.00 8 5 0 1 0 2 0 0
.................................................................ATCCCTGAGACCCTAACTTGTGA..................................................................................................... 23 1 2 4.00 8 2 3 0 0 3 0 0
..................................................................TCCCTGAGACCCTAACTCGT....................................................................................................... 20 1 2 4.00 8 8 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTCGGGT.................................................................................................. 25 2 1 4.00 4 2 0 0 0 2 0 0
................................................................AATCCCTGAGACCCTAACTTGT....................................................................................................... 22 1 2 4.00 8 4 3 0 0 1 0 0
..................................................................TCCCTGAGACCCTAACTCGTGAA.................................................................................................... 23 2 2 4.00 8 3 5 0 0 0 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCTAATC.......................................................... 26 2 1 4.00 4 0 0 0 0 0 4 0
..................................................................TCCCTGATACCCTAACTTGTTA..................................................................................................... 22 2 2 4.00 8 6 1 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGCA................................................................................................. 26 2 1 4.00 4 3 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGAAC................................................................................................. 26 3 1 4.00 4 3 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTCGGG................................................................................................... 24 2 1 4.00 4 2 1 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGGGCGA................................................................................................. 26 3 1 4.00 4 3 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTATGA..................................................................................................... 22 1 2 4.00 8 6 1 0 0 1 0 0
..................................................................TCCCTGAGACCATAACTTGTG...................................................................................................... 21 1 3 3.67 11 11 0 0 0 0 0 0
..................................................................TCCCTGATACCCTAACTTGTGAAA................................................................................................... 24 3 3 3.67 11 9 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGGA.................................................................................................... 23 2 3 3.67 11 7 1 1 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTTTT...................................................................................................... 21 2 7 3.57 25 10 12 3 0 0 0 0
..................................................................TCCGTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 3.50 7 2 3 0 0 2 0 0
....................................................................CCTGAGACCCTAACTTGTGAA.................................................................................................... 21 1 2 3.50 7 2 2 0 0 3 0 0
..................................................................TCCCTGAGACCCTGACTTGTG...................................................................................................... 21 1 2 3.50 7 5 0 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGC....................................................................................................... 20 1 2 3.50 7 2 2 1 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACG................................................................................................... 24 1 2 3.50 7 2 3 0 0 2 0 0
..................................................................TCCCAGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 3.50 7 2 3 1 0 1 0 0
..................................................................TCCCTGAGTCCCTAACTTGTGA..................................................................................................... 22 1 2 3.50 7 1 4 0 0 2 0 0
..................................................................TCCCTGAGACCCTATCTTGTGA..................................................................................................... 22 1 2 3.50 7 4 2 0 0 1 0 0
...................................................................CCCTGAGACCCTAACTTGTGAATC.................................................................................................. 24 3 2 3.50 7 0 0 0 6 0 1 0
..................................................................TCCCTGAGACCGTAACTTGTGAAA................................................................................................... 24 3 2 3.50 7 7 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTATC...................................................................................................... 21 2 3 3.33 10 0 0 0 2 0 8 0
..................................................................TCCCTGAGGCCCTAACTTGT....................................................................................................... 20 1 3 3.33 10 3 3 3 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGAA...................................................................................................... 21 2 7 3.14 22 7 4 9 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTC...................................................................................................... 21 1 2 3.00 6 2 0 1 2 0 1 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGAC................................................................................................. 26 3 2 3.00 6 4 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACC................................................................................................... 24 2 2 3.00 6 0 0 0 2 0 4 0
..................................................................TCCCGGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 3.00 6 5 1 0 0 0 0 0
...................................................................CCCTGAGACCCTAACTTGTG...................................................................................................... 20 0 2 3.00 6 5 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTTAG.................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTATG...................................................................................................... 21 1 2 3.00 6 4 1 0 0 1 0 0
..................................................................TCCCTGAGACCCTCACTTGTGAG.................................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0 0
.......................................................................................................TCACAAGTCAGGCTCTTTGGACA............................................................... 23 2 1 3.00 3 2 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGGGTGA................................................................................................. 26 3 1 3.00 3 2 0 0 0 1 0 0
..................................................................TCCCTGAGACCATAACTTGTGAA.................................................................................................... 23 2 3 3.00 9 6 2 0 0 1 0 0
..................................................................CCCCTGAGACCCTAACTTGTG...................................................................................................... 21 1 2 3.00 6 2 1 0 0 3 0 0
..................................................................TCCCTGAGACGCTAACTTGTGA..................................................................................................... 22 1 2 3.00 6 4 1 0 0 1 0 0
.................................................................CTCCCTGAGACCCTAACTTGTGA..................................................................................................... 23 1 2 3.00 6 1 3 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGGAG................................................................................................. 26 2 1 3.00 3 2 0 0 0 1 0 0
..................................................................TCCCTGGGACCCTAACTTGTG...................................................................................................... 21 1 2 3.00 6 3 2 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGGA................................................................................................. 26 2 1 3.00 3 3 0 0 0 0 0 0
..........................................................................................................CAAGTCAGGCTCTTGGGACC............................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGG....................................................................................................... 20 1 2 3.00 6 4 0 2 0 0 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGAT................................................................ 22 1 1 3.00 3 2 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGAGA................................................................................................. 26 2 1 3.00 3 2 1 0 0 0 0 0
................................................................AATCCCTGAGACCCTAACTTGTGAA.................................................................................................... 25 2 2 3.00 6 2 2 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGCGAA.................................................................................................... 23 2 2 3.00 6 2 4 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGT.................................................................................................. 25 1 2 3.00 6 3 3 0 0 0 0 0
..................................................................TCCCTGAGACCCTAAATTGTGA..................................................................................................... 22 1 2 2.50 5 3 1 1 0 0 0 0
..................................................................TCCCTGAGACACTAACTTGTG...................................................................................................... 21 1 2 2.50 5 0 3 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGG.................................................................................................. 25 2 2 2.50 5 3 0 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGG.................................................................................................. 25 2 2 2.50 5 2 1 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTGGTGA..................................................................................................... 22 1 2 2.50 5 2 0 1 0 1 1 0
..................................................................TCACTGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 2.50 5 4 1 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTAC..................................................................................................... 22 2 2 2.50 5 0 0 0 2 1 2 0
..........................................................................................................CAAGTCAGGCTCTTGGGACA............................................................... 20 1 2 2.50 5 3 0 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGT.................................................................................................. 25 1 2 2.50 5 3 1 0 0 1 0 0
..................................................................TCCCTGACACCCTAACTTGTG...................................................................................................... 21 1 2 2.50 5 4 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAAC.................................................................................................. 25 3 2 2.50 5 1 0 0 3 0 1 0
..................................................................TCCCTGAGACCCTAACCTGT....................................................................................................... 20 1 2 2.50 5 3 0 0 0 2 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAACTC................................................................................................. 26 3 2 2.50 5 0 0 0 2 0 3 0
..................................................................TCCCTGAGAACCTAACTTGTG...................................................................................................... 21 1 2 2.50 5 4 1 0 0 0 0 0
..................................................................TCCCTGCGACCCTAACTTGTTA..................................................................................................... 22 2 2 2.50 5 4 0 1 0 0 0 0
..................................................................TCCATGAGACCCTAACTTGTGA..................................................................................................... 22 1 2 2.50 5 3 0 1 0 0 0 1
..................................................................TCCCTGAGACCCTAACTTTTGT..................................................................................................... 22 2 4 2.50 10 3 5 2 0 0 0 0
..................................................................TCCCTGAGACCCTACCTTGTGT..................................................................................................... 22 2 2 2.50 5 2 2 0 0 1 0 0
..................................................................TCCCTGAGCCCCTAACTTTTGA..................................................................................................... 22 2 2 2.50 5 1 3 1 0 0 0 0
..................................................................TCCCTGATACCCTAACTTTTGA..................................................................................................... 22 2 5 2.40 12 8 2 2 0 0 0 0
..................................................................TCCCTGATACCCTAACTTGTGT..................................................................................................... 22 2 3 2.33 7 2 2 3 0 0 0 0
..................................................................TCCCTGAGAACCTAACTTGT....................................................................................................... 20 1 3 2.33 7 4 1 2 0 0 0 0
..................................................................TCCCTGAGACTCTAACTTGTTA..................................................................................................... 22 2 3 2.33 7 2 3 2 0 0 0 0
..................................................................TCCCTGAGACCCTACCTTGTGAA.................................................................................................... 23 2 3 2.33 7 4 2 1 0 0 0 0
..................................................................TCCCTGAGACCCTCACTTGTGAAA................................................................................................... 24 3 4 2.25 9 6 2 0 0 1 0 0
..................................................................TCCCTGAGACCTTAACTTGTGAA.................................................................................................... 23 2 4 2.25 9 5 2 1 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAAGCA................................................................................................. 26 2 1 2.00 2 0 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACAAA................................................................................................. 26 3 1 2.00 2 0 1 0 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTTCGGG.................................................................................................. 25 3 1 2.00 2 1 0 0 0 1 0 0
......................................................................................................ATCACAAGTCAGGCTCTTGGG.................................................................. 21 0 1 2.00 2 1 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGCGGT................................................................................................ 27 3 1 2.00 2 1 1 0 0 0 0 0
...................................................................CCCTGAGACCCTAACTTGTGAAA................................................................................................... 23 2 2 2.00 4 3 1 0 0 0 0 0
................................................................AATCCCTGAGACCCTAACTTGTGAAA................................................................................................... 26 3 2 2.00 4 2 1 0 0 1 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGGCC............................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGTGATC................................................................................................. 26 3 1 2.00 2 0 0 0 2 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGGATC............................................................................................... 28 3 1 2.00 2 0 0 0 2 0 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGCCA............................................................... 21 2 1 2.00 2 1 0 0 0 0 0 1
..................................................................TCCCTGAGACCCTAACTTGTCGGGG.................................................................................................. 25 3 1 2.00 2 0 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGCGGG.................................................................................................. 25 2 1 2.00 2 1 0 1 0 0 0 0
..................................................................TCCCTGAGACCCCAACTTGT....................................................................................................... 20 1 2 2.00 4 2 2 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGAA.................................................................................................. 25 2 1 2.00 2 1 0 0 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTCAGGTG................................................................................................. 26 2 1 2.00 2 0 1 0 0 1 0 0
..................................................................TCCCTGAGACCCTAACTTGTGACGGA................................................................................................. 26 2 1 2.00 2 2 0 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGCA.................................................................................................... 23 2 3 2.00 6 4 1 1 0 0 0 0
..................................................................TCCCTGAGACTCTAACTTTTGA..................................................................................................... 22 2 3 2.00 6 4 2 0 0 0 0 0
.....................................................................CTGAGACCCTAACTTGTGAGAA.................................................................................................. 22 2 1 2.00 2 0 1 0 0 1 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGACCTC............................................................. 25 1 1 2.00 2 0 0 0 0 0 2 0
..................................................................TCCCTGAGACCCGAACTTGTGA..................................................................................................... 22 1 2 2.00 4 3 0 1 0 0 0 0
..................................................................TCCCTGCGCCCCTAACTTGTGA..................................................................................................... 22 2 2 2.00 4 1 3 0 0 0 0 0
.........................................................................................................ACAAGTCAGGCTCTTGGGACCATT............................................................ 24 3 1 2.00 2 0 1 0 0 1 0 0
..................................................................TCCTTGAGACCCTAACTTGT....................................................................................................... 20 1 2 2.00 4 1 3 0 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAACAA................................................................................................. 26 3 1 2.00 2 1 0 0 0 1 0 0
.......................................................................................................TCACAAGTCAGGCTCTTGGGACT............................................................... 23 1 1 2.00 2 1 0 1 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTGTGAGGA.................................................................................................. 25 1 1 2.00 2 0 0 2 0 0 0 0
..................................................................TCCCTGAGACCCTAACTTCTG...................................................................................................... 21 1 3 2.00 6 1 2 3 0 0 0 0
..................................................................TCCCTGCGACCCTAACTTGTGT..................................................................................................... 22 2 2 2.00 4 3 1 0 0 0 0 0
...................................................................CCCTGAGACTCTAACTTGTGA..................................................................................................... 21 1 2 2.00 4 1 3 0 0 0 0 0

Anti-sense strand reads

CATTAAAGATTCGATAGGAATAAAGACCTTCTTCTTAAGAGGACGTAGTTTGGTCTGAAAAGGATCAGGGACTCTGGGATTGAACACTCCATAAAATCATTGTAGTGTTCAGTCCGAGAACCCTGGATCCGCCTCCCCTTGGTCGTCGAAACCTGGAATGACTAACAGACGTCAATGGTGGTCTTGTTT

*************************************************((...((((.(((((((((.((((.(((.((((((((.((.........)).)))))))).))).)))))))).))))).)))).))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
..................................................................................................ATTGTAGTGTTCAGTCCGAGAA..................................................................... 22 0 1 1.00 1 1

Generated: 09/01/2015 at 12:21 PM