ID:

mml-mir-1251

 Coordinate:

chr11:99226781-99226839 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.7 -33.3 -33.3

Sense Strand Reads

GTAATTAGGTGAAGAAACTCCACCCGAGCGTCCATGGGTCAGCTATGTGGACTCTAGCTGCCAAAGGCGCTTCTCCTTCTGAACAGAGCGCTTTGCTCAGCCAGTGTAGACATGGCCTGATAAACAATGGAACTTCTCCCTTGCGAACTGGAGTTTGGA

***********************************..(((((((((((..((.((.((((...(((((((((.((.....))...)))))))))...)))).)).))..)))))).)))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116845

epididymis		 SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116844

epididymis		 SRR116840

epididymis
..................................................ACTCTAGCTGCCAAAGGCGCTATC..................................................................................... 24 3 1 23.00 23 22 0 0 1 0
..................................................ACTCTAGCTGCCAAAGGCGCATC...................................................................................... 23 1 1 5.00 5 3 0 0 2 0
..................................................ACTCTAGCTGCCAAAGGCGCT........................................................................................ 21 0 1 2.00 2 0 2 0 0 0
..................................................ACTCTAGCTGCCAAAGGCGCTT....................................................................................... 22 0 1 2.00 2 0 1 1 0 0
..................................................ACTCTAGCTTCCAAAGGCGCATC...................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..................................................ACTCTAGCTGCCAAAGGCGC......................................................................................... 20 0 1 1.00 1 0 0 1 0 0
..................................................ACTCTAGCTGCCAAAGGCGCTAATC.................................................................................... 25 2 1 1.00 1 1 0 0 0 0
..................................................ACTCTAGCTGCCAAAGGCGATC....................................................................................... 22 2 1 1.00 1 1 0 0 0 0
..................................................ACTCTGGCTGCCAAAGGCGCT........................................................................................ 21 1 1 1.00 1 0 1 0 0 0
..................................................ACTCTAGCTGCCAAAGGCGCTTAATC................................................................................... 26 3 1 1.00 1 1 0 0 0 0
..................................................ACTCTAGCTGCCAAAGGCG.......................................................................................... 19 0 1 1.00 1 0 0 1 0 0
.......................................................................TCTCCTTCTGAACAGAG....................................................................... 17 0 5 0.20 1 0 0 0 0 1

Anti-sense strand reads

CATTAATCCACTTCTTTGAGGTGGGCTCGCAGGTACCCAGTCGATACACCTGAGATCGACGGTTTCCGCGAAGAGGAAGACTTGTCTCGCGAAACGAGTCGGTCACATCTGTACCGGACTATTTGTTACCTTGAAGAGGGAACGCTTGACCTCAAACCT

***********************************..(((((((((((..((.((.((((...(((((((((.((.....))...)))))))))...)))).)).))..)))))).)))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:07 PM