ID:

mml-mir-1230

Coordinate:

chr8:149005985-149006057 +

Confidence:

Known

Class:

Unknown

Genomic Locale:

intergenic

[View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-47.7 -47.2 -47.2

Sense Strand Reads

CTGCCACCGACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTGGGGGCATCTCGGAGGAGGTGGGGGGTGTGGCGCCCAGCGGATGACTCCGAGCGGCTCCTTTCCCAGGTGTTCCTGGTGCTGACCCTGCAGCTGTCGGTGACCCTGTCCACGGTGTC

***********************************((((((((((((...))))))))))))..(((((((....((..(((((...)))))..)).....)))))))((((.......(((((....))))).))))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116839

testes
SRR116843

cortex
..................................................GTGGGTGGGGGCATCTCGGAG...................................................................................................... 21 0 1 3.00 3 0 3
................TGACAAGAGCATCCGACAGGCCTTCA................................................................................................................................... 26 0 1 2.00 2 2 0
....................................................................................................................................................TGTCGGTGACCCTGTCCACGGTGTT 25 1 1 1.00 1 1 0
.TGCCACCGACTGGGATGACAAGAGC................................................................................................................................................... 25 0 1 1.00 1 1 0
.TGCCACCGACTGGGATGACAAGAGCA.................................................................................................................................................. 26 0 1 1.00 1 1 0
..............................................................................................................................................TGCAGCTGTCGGTGACCCTGTCCAC...... 25 0 1 1.00 1 1 0

Anti-sense strand reads

GACGGTGGCTGACCCTACTGTTCTCGTAGGCTGTCCGGAAGTAGGCGTTCCACCCACCCCCGTAGAGCCTCCTCCACCCCCCACACCGCGGGTCGCCTACTGAGGCTCGCCGAGGAAAGGGTCCACAAGGACCACGACTGGGACGTCGACAGCCACTGGGACAGGTGCCACAG

***********************************((((((((((((...))))))))))))..(((((((....((..(((((...)))))..)).....)))))))((((.......(((((....))))).))))***********************************
Read size # Mismatch Hit Count Total Norm Total SRR116844

epididymis
..............CTACTGCTCTCGTAGTCTG............................................................................................................................................ 19 2 7 0.14 1 1

Generated: 09/01/2015 at 12:32 PM