ID:

mml-mir-1179

 Coordinate:

chr7:67636293-67636403 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.5 -42.3 -42.2

Sense Strand Reads

CTTATTTTCTTTATGGACAAAGGGTCTACTTTCAAGAAGATAACTGAGCTCTTATTGGCTGGAAAGGAAGAAGCATTCTTTCATTGGTTGGTGTGTATTGCCTTGTCAACCAATAAGAGGATGCCATTTATCCTTTTCTGACTAGCTGAGTGAGCAGGGTGCACAGAAGGATTGAATCTGCCTTAGTTCCATCCAGTAGCAAAGGATAGAA

***********************************.......(((..((((...((((((((((((((.((((((((((((.(((((((((..............))))))))).)))))))))..))).)))))).....))))))))..))))..)))................*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116841

prostate
....................................................................AGAAGCATTCTTTCATTGGTTG......................................................................................................................... 22 0 1 2.00 2 2 0
......................................................................AAGCATTCTTTCATTGGTTGGTA...................................................................................................................... 23 1 1 1.00 1 0 1
....................................................................AAAAGCATTCTTTCATTGGTTGGT....................................................................................................................... 24 1 1 1.00 1 1 0
......................................................................AAGCATTCTTTCATTGGTTGGT....................................................................................................................... 22 0 1 1.00 1 1 0
....................................................................AGAAGCATTCTTTCATTGGTTAA........................................................................................................................ 23 2 3 0.33 1 1 0

Anti-sense strand reads

GAATAAAAGAAATACCTGTTTCCCAGATGAAAGTTCTTCTATTGACTCGAGAATAACCGACCTTTCCTTCTTCGTAAGAAAGTAACCAACCACACATAACGGAACAGTTGGTTATTCTCCTACGGTAAATAGGAAAAGACTGATCGACTCACTCGTCCCACGTGTCTTCCTAACTTAGACGGAATCAAGGTAGGTCATCGTTTCCTATCTT

***********************************.......(((..((((...((((((((((((((.((((((((((((.(((((((((..............))))))))).)))))))))..))).)))))).....))))))))..))))..)))................*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 09/01/2015 at 12:28 PM