ID:

mml-mir-101-2

 Coordinate:

chr15:73198734-73198812 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.0 -31.9 -31.8
mature

  1. mml-mir-101-1  chr1:68426166-68426186 -
  2. mml-mir-101-2  chr15:73198745-73198765 -
star

Sense Strand Reads

GAGGGCGGTGAGCTGGGTGGCGGGGAATATTCAGGTAGATATGAGACTGAACTGTCCTTTTTCGGTTATCATGGTACCGATGCTGTATATCTGAAAGGTACAGTACTGTGATAACTGAAGAATGGTGGTGCCATCACATTGAGAAAGGGTTGGGGACTGTGGTGGAGCTATGCAGCCTT

***********************************.....(((.((.((.((((.((((((((((((((((((((......(((((((.........))))))))))))))))))))))))).))))))..)))).))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116841

prostate		 SRR116844

epididymis		 SRR116845

epididymis		 SRR116839

testes
.................................................................................................GTACAGTACTGTGATAACTGA............................................................. 21 0 2 50175.50 100351 37824 30080 19037 12770 3 1 636
..................................................................................................TACAGTACTGTGATAACTGA............................................................. 20 0 2 42621.00 85242 31418 23134 16356 13850 1 0 483
.................................................................................................GTACAGTACTGTGATAACTGAA............................................................ 22 0 2 30629.50 61259 20318 22710 10040 7821 8 4 358
..................................................................................................TACAGTACTGTGATAACTGAA............................................................ 21 0 2 30271.50 60543 18566 20859 10898 9910 0 1 309
..................................................................................................TACAGTACTGTGATAACTGAAA........................................................... 22 1 2 17858.50 35717 11163 12050 5957 6346 1 1 199
.................................................................................................GTACAGTACTGTGATAACTGAAA........................................................... 23 1 2 9163.00 18326 8214 5235 2531 2229 0 2 115
..................................................................................................TACAGTACTGTGATAACTGAAG........................................................... 22 0 2 7533.00 15066 4389 4679 3319 2572 0 2 105
..................................................................................................TACAGTACTGTGATAACTGAAT........................................................... 22 1 2 5332.00 10664 2077 4418 1813 2288 5 1 62
..................................................................................................TACAGTACTGTGATAACTGAAAA.......................................................... 23 1 1 4823.00 4823 1572 1636 799 787 0 3 26
..................................................................................................TACAGTACTGTGATAACTGAAGATC........................................................ 25 2 1 4339.00 4339 0 1 1 0 2197 2140 0
.................................................................................................GTACAGTACTGTGATAACTGAAAA.......................................................... 24 1 1 4121.00 4121 1506 1461 688 440 1 1 24
..................................................................................................TACAGTACTGTGATAACTGAAGA.......................................................... 23 0 1 2355.00 2355 519 932 433 423 15 18 15
..................................................................................................TACAGTACTGTGATAACTGAAAAA......................................................... 24 1 1 2131.00 2131 705 701 339 375 0 0 11
..................................................................................................TACAGTACTGTGATAACTG.............................................................. 19 0 2 2109.50 4219 1305 1243 970 679 0 0 22
.................................................................................................GTACAGTACTGTGATAACTTA............................................................. 21 1 2 1365.50 2731 1119 64 796 735 0 0 17
.................................................................................................GTACAGTACTGTGATAACTGAAAAA......................................................... 25 1 1 1032.00 1032 440 301 136 149 0 0 6
.................................................................................................GTACAGTACTGTGATAACTGAATC.......................................................... 24 2 2 872.00 1744 1 1 0 0 754 988 0
.................................................................................................GTACAGTACTGTGATAACTG.............................................................. 20 0 2 719.50 1439 585 421 254 171 0 0 8
..................................................................................................TACAGTACTGTGATAACTGAATC.......................................................... 23 2 2 714.50 1429 1 0 0 1 829 598 0
..................................................................................................TACAGTACTGTGATAACTGAATATC........................................................ 25 3 2 702.50 1405 0 0 0 0 711 694 0
..................................................................................................TACAGTACTGTGATAACTGAAGAA......................................................... 24 0 1 673.00 673 202 188 155 118 1 2 7
.................................................................................................GTACAGTACTGTGATAACTTAA............................................................ 22 1 2 662.50 1325 525 35 363 394 0 0 8
.................................................................................................GTACAGTACTGTGATAACTGT............................................................. 21 1 2 524.50 1049 303 351 220 167 0 0 8
.................................................................................................GTACAGTACTGTGATAACT............................................................... 19 0 2 493.50 987 409 292 188 93 0 0 5
..................................................................................................TACAGTACTGTGATAACTTA............................................................. 20 1 4 471.25 1885 821 29 511 507 0 0 17
.................................................................................................GTACAGTACTGTGATAACTGAT............................................................ 22 1 2 463.00 926 254 364 164 131 0 0 13
..................................................................................................TACAGTACTGTGATAACTGAAGT.......................................................... 23 1 2 455.50 911 148 251 237 262 0 0 13
..................................................................................................TACAGTACTGTGATAACTGAAGAATC....................................................... 26 1 1 443.00 443 0 0 0 0 219 224 0
..................................................................................................TACAGTACTGTGATAACTTAA............................................................ 21 1 3 361.67 1085 417 13 322 321 0 0 12
..................................................................................................TACAGTACTGTGATAACTGAATAA......................................................... 24 1 1 332.00 332 76 117 64 71 0 0 4
..................................................................................................TACAGTACTGTGATAACTGAAGTATC....................................................... 26 2 2 321.00 642 0 0 0 0 392 250 0
..................................................................................................TACAGTACTGTGATAACTGAC............................................................ 21 1 2 264.50 529 164 265 43 55 0 0 2
..................................................................................................TACAGTACTGTGATAACTGAAC........................................................... 22 1 2 261.00 522 160 181 69 96 7 6 3
..................................................................................................TACAGTACTGTTATAACTGA............................................................. 20 1 2 255.00 510 281 16 104 105 0 0 4
..................................................................................................TACAGTACTGTGATAACTGAT............................................................ 21 1 2 253.00 506 124 177 88 114 0 0 3
.................................................................................................GTACAGTACTGTTATAACTGA............................................................. 21 1 2 238.00 476 303 27 95 48 0 0 3
.................................................................................................GTACAGTACTGTGATAACTGAAT........................................................... 23 1 2 224.50 449 104 172 77 82 3 4 7
.................................................................................................GTACAGTACTGTGATAACTGAAATC......................................................... 25 3 2 200.50 401 1 2 0 0 136 262 0
.................................................................................................GTACAGTACTGTGATAACTGAC............................................................ 22 1 2 184.50 369 174 111 42 33 1 6 2
..................................................................................................TACAGTACTGTGATAACTGAACAA......................................................... 24 1 1 182.00 182 54 58 31 36 0 0 3
..................................................................................................TACAGTACTGTGATAACTGT............................................................. 20 1 3 178.33 535 163 137 103 128 0 0 4
.................................................................................................GTACAGTACTGTGATAATTGA............................................................. 21 1 2 174.00 348 189 56 53 50 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAAATC........................................................ 25 3 2 169.00 338 0 0 0 0 167 171 0
.................................................................................................GTACAGTACTGTGATAAC................................................................ 18 0 2 158.50 317 96 111 67 42 0 0 1
.................................................................................................GTACAGTACTTTGATAACTGA............................................................. 21 1 2 157.00 314 126 39 94 48 0 0 7
..................................................................................................TACAGTACTGTTATAACTGAA............................................................ 21 1 2 148.50 297 137 9 72 75 0 0 4
..................................................................................................TACAGTACTGTGATAACTGATT........................................................... 22 2 3 146.33 439 107 151 82 97 0 0 2
..................................................................................................TACAGTACTGTGATAACT............................................................... 18 0 3 141.67 425 115 143 78 85 0 0 4
.................................................................................................GTACAGTACTGTGATAACTTAAA........................................................... 23 2 3 140.33 421 203 13 93 111 0 0 1
.................................................................................................GTACAGTACTGTTATAACTGAA............................................................ 22 1 2 124.00 248 153 11 45 33 0 0 6
..................................................................................................TACAGTACTGTGATAACTTAAG........................................................... 22 1 2 121.00 242 75 5 85 75 0 0 2
..................................................................................................TACAGTACTGTGATAACTGAATT.......................................................... 23 2 2 121.00 242 30 71 39 98 2 0 2
..................................................................................................TACAGTACTGTGATAACTGAATTATC....................................................... 26 3 2 112.50 225 1 0 0 0 119 105 0
.................................................................................................GTACAGTACTGCGATAACTGA............................................................. 21 1 2 112.50 225 190 21 11 3 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAATC......................................................... 24 3 5 111.20 556 0 1 0 0 291 264 0
..................................................................................................TACAGTACTGTGATAACTGAATA.......................................................... 23 1 1 111.00 111 21 47 8 32 2 0 1
.................................................................................................GTACAGTACTGTGATACCTGA............................................................. 21 1 2 110.00 220 88 45 54 33 0 0 0
..................................................................................................TACAGTACTGTGATAACTTAAA........................................................... 22 2 6 101.33 608 229 5 138 231 0 0 5
.................................................................................................GTCCAGTACTGTGATAACTGA............................................................. 21 1 2 97.00 194 73 76 37 7 0 0 1
.................................................................................................ATACAGTACTGTGATAACTGA............................................................. 21 1 2 96.50 193 74 49 34 36 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGATC........................................................... 23 2 2 92.00 184 0 1 2 0 111 70 0
.................................................................................................GTACAGTACTGTGATAATTGAA............................................................ 22 1 2 90.00 180 98 32 24 25 0 0 1
..................................................................................................TACAGTACTGTCATAACTGA............................................................. 20 1 2 86.50 173 154 8 7 4 0 0 0
..................................................................................................TACAGTACTTTGATAACTGA............................................................. 20 1 2 86.00 172 51 11 48 60 0 0 2
.................................................................................................GTACAGTACTTTGATAACTGAA............................................................ 22 1 2 84.00 168 70 24 45 28 0 0 1
..................................................................................................TACAGTACTGTGATAACTTAAGATC........................................................ 25 3 1 77.00 77 0 0 0 0 44 33 0
.................................................................................................GTCCAGTACTGTGATAACTGAA............................................................ 22 1 2 76.00 152 38 79 20 14 0 0 1
.................................................................................................GTACAGTACTGTGATAACTGAATATC........................................................ 26 3 1 68.00 68 0 0 0 0 28 40 0
..................................................................................................TACATTACTGTGATAACTGAAGATC........................................................ 25 3 1 68.00 68 0 0 0 0 32 36 0
.................................................................................................GTACAGTACTGTGATAACTGAAC........................................................... 23 1 2 67.00 134 48 42 18 10 3 12 1
.................................................................................................GTACAGTACTGTGATAACTGAAG........................................................... 23 0 2 65.50 131 44 58 16 13 0 0 0
..................................................................................................TACAGTACTGTGATAAATGA............................................................. 20 1 3 64.33 193 71 21 47 54 0 0 0
..................................................................................................TACAGTACTGTGATAAATGAA............................................................ 21 1 2 62.50 125 39 20 27 37 0 0 2
...................................................................................................ACAGTACTGTGATAACTGA............................................................. 19 0 2 60.50 121 35 47 16 22 0 0 1
..................................................................................................TACAGTACTGTGATAAC................................................................ 17 0 5 60.40 302 54 134 53 59 1 0 1
...................................................................................................ACAGTACTGTGATAACTGAAA........................................................... 21 1 2 56.00 112 24 39 30 17 0 0 2
..................................................................................................TACAGTACTGTGATAACTGACT........................................................... 22 2 6 56.00 336 83 142 49 60 0 0 2
.................................................................................................GTACAGTACTGCGATAACTGAA............................................................ 22 1 2 55.50 111 83 17 8 2 1 0 0
..................................................................................................TACAGTACTGTTATAACTGAAA........................................................... 22 2 3 54.67 164 76 6 27 51 0 0 4
..................................................................................................TACAGTACTGTGATAACTGAAGAC......................................................... 24 1 1 54.00 54 3 3 3 2 21 22 0
..................................................................................................TACAGTACTGTCATAACTGAA............................................................ 21 1 2 53.00 106 92 5 8 1 0 0 0
.................................................................................................GTACAGTACTGTGATAACTA.............................................................. 20 1 5 52.60 263 94 83 48 36 1 0 1
..................................................................................................TACAGTACTGTGATAACTTAAGA.......................................................... 23 1 1 52.00 52 20 0 10 20 1 1 0
.................................................................................................GTACAGTACTTTGATAACTTA............................................................. 21 2 4 51.50 206 86 9 60 51 0 0 0
.................................................................................................GTACAGTACTGAGATAACTGA............................................................. 21 1 2 50.00 100 82 13 4 1 0 0 0
.................................................................................................GTACAGTACTGTGATAACTAA............................................................. 21 1 5 48.80 244 77 60 63 43 0 0 1
.................................................................................................GTACAGTACTGTGATAACTT.............................................................. 20 1 2 47.50 95 38 12 28 17 0 0 0
..................................................................................................TACAGTACTGTGATAACTGACC........................................................... 22 2 6 46.33 278 90 112 29 45 0 0 2
.................................................................................................GTACAGTACTGTGATAACTGAG............................................................ 22 1 2 45.00 90 32 34 10 13 0 0 1
.................................................................................................ATACAGTACTGTGATAACTGAA............................................................ 22 1 2 44.00 88 19 45 12 11 0 0 1
.................................................................................................GTACAGTACTGTGATAACTTAAAA.......................................................... 24 2 2 44.00 88 39 3 23 22 0 0 1
.................................................................................................GTACAGTACTGTGATACCTGAA............................................................ 22 1 2 43.50 87 28 30 11 18 0 0 0
.................................................................................................GTACCGTACTGTGATAACTGA............................................................. 21 1 2 43.00 86 11 36 24 14 0 0 1
...................................................................................................ACAGTACTGTGATAACTGAAGA.......................................................... 22 0 1 43.00 43 11 15 10 7 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGAAAATC........................................................ 26 3 2 42.50 85 0 0 0 0 26 59 0
.................................................................................................GTACAGTACTGTGATAACTGC............................................................. 21 1 2 42.50 85 21 31 16 17 0 0 0
..................................................................................................TACAGTACTTTGATAACTGAA............................................................ 21 1 2 42.00 84 29 12 28 14 0 0 1
..................................................................................................TACAGTACTGTGATAACTTAAAA.......................................................... 23 2 2 41.00 82 39 1 25 17 0 0 0
...................................................................................................ACAGTACTGTGATAACTGAA............................................................ 20 0 2 37.00 74 25 29 9 11 0 0 0
.................................................................................................GTACAGTACTGTTATAACTGAAA........................................................... 23 2 2 36.50 73 57 3 10 3 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAAAAA........................................................ 25 2 1 34.00 34 16 6 9 3 0 0 0
..................................................................................................TACAGTACTGTGATAACTCAAGATC........................................................ 25 3 1 34.00 34 0 0 0 0 14 20 0
.................................................................................................GTACAGTACCGTGATAACTGA............................................................. 21 1 2 33.50 67 30 21 11 5 0 0 0
..................................................................................................TACAGTACTGTGATAACTGACA........................................................... 22 2 4 33.25 133 32 65 14 22 0 0 0
...................................................................................................ACAGTACTGTGATAACTGAAG........................................................... 21 0 2 32.50 65 14 23 17 10 0 0 1
....................................................................................................CAGTACTGTGATAACTGAAGA.......................................................... 21 0 1 32.00 32 8 4 11 9 0 0 0
..................................................................................................TACAGTACTGTGACAACTGA............................................................. 20 1 2 31.00 62 24 14 11 12 0 0 1
..................................................................................................TACATTACTGTGATAACTGA............................................................. 20 1 3 31.00 93 49 19 13 12 0 0 0
.................................................................................................GTACAGTACTGTGTTAACTGA............................................................. 21 1 3 31.00 93 40 17 20 15 0 0 1
...............................................................................................AAGTACAGTACTGTGATAACTGA............................................................. 23 1 2 30.50 61 28 14 10 9 0 0 0
.................................................................................................GTACAGTACTGTGATAACTAAA............................................................ 22 1 2 30.00 60 20 20 9 11 0 0 0
.................................................................................................GTACAGCACTGTGATAACTGA............................................................. 21 1 2 30.00 60 33 12 8 6 0 0 1
..................................................................................................TACAGTACTGTGATAACTGAACATC........................................................ 25 3 1 30.00 30 0 0 1 0 17 12 0
..................................................................................................TACAGTACTGTGATAACCGA............................................................. 20 1 2 29.50 59 34 17 4 4 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGCA............................................................ 22 1 2 29.50 59 5 42 5 6 0 0 1
.................................................................................................GTACATTACTGTGATAACTGA............................................................. 21 1 2 29.00 58 22 15 14 2 0 0 5
.................................................................................................GTACAGTACTGTGATAACTGAAGATC........................................................ 26 2 1 29.00 29 0 0 2 0 13 14 0
.................................................................................................TTACAGTACTGTGATAACTGA............................................................. 21 1 3 29.00 87 11 37 31 8 0 0 0
.................................................................................................GTACAGTACTTTGATAACTGAAA........................................................... 23 2 2 28.50 57 34 8 8 7 0 0 0
..................................................................................................TACAGTACTGCGATAACTGA............................................................. 20 1 2 28.50 57 25 13 6 8 0 0 5
.................................................................................................GTACAGTATTGTGATAACTGA............................................................. 21 1 2 28.00 56 19 25 5 6 0 0 1
...................................................................................................ACAGTACTGTGATAACTGAAGT.......................................................... 22 1 2 27.50 55 19 12 10 14 0 0 0
.................................................................................................TTACAGTACTGTGATAACTGAA............................................................ 22 1 2 27.50 55 8 25 19 3 0 0 0
.................................................................................................GTACAGTACTTTGATAACTTAA............................................................ 22 2 3 27.00 81 31 0 23 27 0 0 0
..................................................................................................TACAGTACTGTTATAACTGAAG........................................................... 22 1 2 27.00 54 29 5 8 12 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGAT......................................................... 24 1 1 27.00 27 0 1 0 1 14 11 0
..................................................................................................TACAGTACTGTGATAACTGATC........................................................... 22 2 3 26.67 80 1 1 0 1 54 23 0
..................................................................................................TACAGTACCGTGATAACTGA............................................................. 20 1 2 26.50 53 20 14 10 9 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGAACAA......................................................... 25 1 1 26.00 26 3 12 7 3 0 0 1
..................................................................................................TACAGTACTGTGATAACTGAACA.......................................................... 23 1 1 26.00 26 5 12 4 5 0 0 0
..................................................................................................TACAGTACTGTGATAATTGAAGATC........................................................ 25 3 1 26.00 26 0 0 0 0 8 18 0
.................................................................................................GTACAGTACTGTGATAATTGAAA........................................................... 23 2 2 26.00 52 40 4 5 3 0 0 0
..................................................................................................TACAGTACTGTGATAATTGA............................................................. 20 1 2 25.50 51 22 12 8 9 0 0 0
.................................................................................................GTACAGTACTGAGATAACTGAA............................................................ 22 1 2 25.50 51 47 2 0 2 0 0 0
.................................................................................................GTACAGTACTGGGATAACTGA............................................................. 21 1 2 25.00 50 30 12 6 2 0 0 0
..................................................................................................TACAGCACTGTGATAACTGA............................................................. 20 1 3 24.67 74 23 14 9 20 0 0 8
..................................................................................................TACAGTACTGTCATAACTGAAA........................................................... 22 2 2 24.50 49 45 1 0 3 0 0 0
.................................................................................................GTACCGTACTGTGATAACTGAA............................................................ 22 1 2 24.50 49 12 19 8 10 0 0 0
..................................................................................................TACAGTACTGCGATAACTGAA............................................................ 21 1 2 24.00 48 13 18 9 6 0 0 2
..................................................................................................TACAGTACTGTGATACCTGAAGATC........................................................ 25 3 1 23.00 23 0 0 0 0 19 4 0
.................................................................................................GTACAGCACTGTGATAACTGAA............................................................ 22 1 2 23.00 46 12 17 11 5 0 0 1
.................................................................................................GTACGGTACTGTGATAACTGA............................................................. 21 1 2 22.50 45 15 15 8 7 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGTT............................................................ 22 2 2 22.50 45 16 14 8 7 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGAAA........................................................ 25 1 1 22.00 22 2 10 5 4 0 0 1
...................................................................................................ACAGTACTGTGATAACTGAAT........................................................... 21 1 2 21.50 43 9 10 11 13 0 0 0
.................................................................................................GTACAGTACTGTGATGACTGA............................................................. 21 1 2 21.50 43 9 22 6 6 0 0 0
..................................................................................................TACAGTACTGTGGTAACTGA............................................................. 20 1 2 21.50 43 15 19 5 4 0 0 0
..................................................................................................TACAGTACTGTTATAACTGAAGATC........................................................ 25 3 1 21.00 21 0 0 0 0 5 16 0
..................................................................................................TACAGCACTGTGATAACTGAA............................................................ 21 1 2 21.00 42 13 9 9 7 0 0 4
..................................................................................................TACATTACTGTGATAACTGAA............................................................ 21 1 2 21.00 42 16 11 10 5 0 0 0
.................................................................................................GTACAGTACTATGATAACTGA............................................................. 21 1 2 21.00 42 18 6 7 7 0 0 4
..................................................................................................TACAGTACTGTGATAACTGAAGACG........................................................ 25 2 1 21.00 21 9 3 3 5 0 0 1
.................................................................................................GTACAGTACTGTGATAACTGAAAAAA........................................................ 26 2 1 21.00 21 7 7 5 2 0 0 0
.................................................................................................GTACAGTAATGTGATAACTGA............................................................. 21 1 2 21.00 42 7 3 15 17 0 0 0
..................................................................................................TACGGTACTGTGATAACTGA............................................................. 20 1 2 21.00 42 16 14 8 2 0 0 2
.................................................................................................GTACAGTACTGTGACAACTGA............................................................. 21 1 2 21.00 42 20 12 4 6 0 0 0
.................................................................................................GTACAGTACTGTGGTAACTGA............................................................. 21 1 2 20.50 41 13 14 10 3 0 0 1
..................................................................................................TCCAGTACTGTGATAACTGAA............................................................ 21 1 2 20.50 41 4 31 1 5 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGACA........................................................... 23 2 3 20.33 61 29 17 8 7 0 0 0
.................................................................................................GTATAGTACTGTGATAACTGA............................................................. 21 1 2 20.00 40 14 13 9 2 0 0 2
..................................................................................................TACAGTACTGTGATAACTAAA............................................................ 21 1 3 19.67 59 24 19 9 7 0 0 0
.................................................................................................GTACAGTACTGTGATAAATGA............................................................. 21 1 3 19.67 59 19 23 10 7 0 0 0
.................................................................................................CTACAGTACTGTGATAACTGA............................................................. 21 1 2 19.50 39 5 25 4 5 0 0 0
.................................................................................................GTACAGTATTGTGATAACTGAA............................................................ 22 1 2 19.50 39 14 17 6 2 0 0 0
.................................................................................................GCACAGTACTGTGATAACTGA............................................................. 21 1 3 19.33 58 18 23 7 8 0 0 2
..................................................................................................TACAGTACTGTGATAACTGATA........................................................... 22 2 3 19.33 58 15 22 6 13 1 0 1
..................................................................................................TACAGTACTGTGATAACTGAAAT.......................................................... 23 2 3 19.00 57 12 15 10 17 1 1 1
..................................................................................................TACAGTACTGTGATAACTGAG............................................................ 21 1 3 18.67 56 15 21 10 10 0 0 0
.................................................................................................GTACAGTACTGTGATCACTGA............................................................. 21 1 2 18.50 37 19 11 2 4 0 0 1
.................................................................................................GTACAGTACTGTCATAACTGA............................................................. 21 1 2 18.00 36 11 17 4 3 0 0 1
..................................................................................................TACAGTACTGTGATAACTGACAA.......................................................... 23 2 1 18.00 18 5 8 2 2 0 0 1
..................................................................................................TACAGTACTGTGATAAATGAAA........................................................... 22 2 4 18.00 72 25 13 10 24 0 0 0
.................................................................................................GTACAGTACTGCGATAACTGAAA........................................................... 23 2 3 18.00 54 48 3 1 2 0 0 0
.................................................................................................GTACAGTACTGTGATA.................................................................. 16 0 5 17.80 89 1 50 20 18 0 0 0
..................................................................................................TACAGTCCTGTGATAACTGA............................................................. 20 1 3 17.67 53 28 12 6 7 0 0 0
.................................................................................................GTCCAGTACTGTGATAACTGAAA........................................................... 23 2 2 17.50 35 12 14 5 4 0 0 0
.................................................................................................GTACAGTACTGTGATAGCTGA............................................................. 21 1 2 17.50 35 14 14 5 2 0 0 0
..................................................................................................TACAGTCCTGTGATAACTGAA............................................................ 21 1 2 17.50 35 19 7 5 4 0 0 0
.................................................................................................GTACAGTACTCTGATAACTGA............................................................. 21 1 2 17.50 35 15 13 3 3 0 0 1
..................................................................................................TACAGTACTGTGATAACTGCA............................................................ 21 1 2 17.00 34 12 15 4 3 0 0 0
..................................................................................................TACAGTACTTTGATAACTGAAG........................................................... 22 1 2 17.00 34 9 6 12 6 0 0 1
.................................................................................................GTACAGTACTGTGATAACTGTA............................................................ 22 1 2 17.00 34 8 16 7 3 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAGGA.......................................................... 23 1 1 17.00 17 5 7 4 1 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGACA........................................................ 25 2 1 17.00 17 6 6 3 1 0 0 1
..................................................................................................CACAGTACTGTGATAACTGA............................................................. 20 1 3 16.67 50 21 14 8 7 0 0 0
.................................................................................................GTACAGTACCGTGATAACTGAA............................................................ 22 1 2 16.50 33 9 13 6 5 0 0 0
.................................................................................................ATACAGTACTGTGATAACTG.............................................................. 20 1 2 16.50 33 9 12 6 6 0 0 0
.................................................................................................GTACAGTACTGTGATAACCGAA............................................................ 22 1 2 16.50 33 13 13 5 2 0 0 0
..................................................................................................TACAGTACTGTGATCACTGAA............................................................ 21 1 2 16.50 33 10 19 0 4 0 0 0
..................................................................................................TACAGTACTGTGATAACTTAAAAA......................................................... 24 2 2 16.00 32 12 1 8 11 0 0 0
.................................................................................................GTGCAGTACTGTGATAACTGA............................................................. 21 1 2 16.00 32 13 12 5 2 0 0 0
..................................................................................................TACAGTCCTGTGATAACTGAAGATC........................................................ 25 3 1 16.00 16 0 0 0 0 8 8 0
..................................................................................................TACAGTACTGTGATACCTGA............................................................. 20 1 2 16.00 32 5 16 6 4 0 0 1
..................................................................................................TACAGTACTGTGATCACTGA............................................................. 20 1 3 15.67 47 13 23 8 3 0 0 0
.................................................................................................GTACAGTACTGTGATAACCGA............................................................. 21 1 2 15.50 31 16 9 2 4 0 0 0
..................................................................................................TACAGTACTGTGATAATTGAA............................................................ 21 1 2 15.50 31 13 13 3 2 0 0 0
..................................................................................................TACCGTACTGTGATAACTGA............................................................. 20 1 2 15.50 31 1 27 1 2 0 0 0
.................................................................................................ATACAGTACTGTGATAACTGAAA........................................................... 23 2 2 15.00 30 6 12 8 4 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGAAGA.......................................................... 24 0 1 15.00 15 4 8 1 1 0 0 1
.................................................................................................GTACAGTACTGTGATAACTCAA............................................................ 22 1 2 15.00 30 18 7 1 3 0 0 1
..................................................................................................TCCAGTACTGTGATAACTGA............................................................. 20 1 2 15.00 30 2 19 3 6 0 0 0
.................................................................................................GTACAGTACTGTAATAACTGA............................................................. 21 1 2 15.00 30 11 13 5 1 0 0 0
.................................................................................................GTACAGTACTGTGCTAACTGA............................................................. 21 1 2 15.00 30 12 8 7 1 0 0 2
.................................................................................................GTACATTACTGTGATAACTGAA............................................................ 22 1 2 15.00 30 7 12 3 4 0 0 4
...............................................................................................AAGTACAGTACTGTGATAACTGAA............................................................ 24 1 2 14.50 29 11 10 5 3 0 0 0
..................................................................................................TACAGTACTGTGGTAACTGAA............................................................ 21 1 2 14.50 29 9 13 3 4 0 0 0
..................................................................................................TACAGTACTGTGATAAATGAAG........................................................... 22 1 2 14.50 29 10 3 7 9 0 0 0
..................................................................................................TACAGTACTGTGATAACTTAAGAA......................................................... 24 1 1 14.00 14 3 0 6 5 0 0 0
..................................................................................................TACAGTACTGTGAAAACTGAA............................................................ 21 1 2 14.00 28 6 13 3 6 0 0 0
.................................................................................................GTATAGTACTGTGATAACTGAA............................................................ 22 1 2 14.00 28 8 9 7 4 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAAAATC....................................................... 26 2 1 14.00 14 0 0 0 0 6 8 0
..................................................................................................TACAGTACTGTGATAACTGACGATC........................................................ 25 3 1 14.00 14 0 0 0 1 10 3 0
.................................................................................................GTACAGTACTGTGATAA................................................................. 17 0 3 14.00 42 3 24 10 4 0 0 1
..................................................................................................TACAGTACTGTGATAACCGAA............................................................ 21 1 2 14.00 28 14 7 2 5 0 0 0
..................................................................................................TACAGTACTGTGATAACTT.............................................................. 19 1 6 13.83 83 30 6 27 19 0 0 1
..................................................................................................TACAGTACTGTAATAACTGA............................................................. 20 1 3 13.67 41 20 10 5 6 0 0 0
.................................................................................................GTACGGTACTGTGATAACTGAA............................................................ 22 1 2 13.50 27 9 12 5 1 0 0 0
..................................................................................................TACAGTACCGTGATAACTGAA............................................................ 21 1 2 13.50 27 9 8 5 5 0 0 0
..................................................................................................TACAGTACTGTGCTAACTGA............................................................. 20 1 2 13.50 27 11 8 2 6 0 0 0
.................................................................................................GTACAGTACTGTGATAACTTAT............................................................ 22 2 2 13.50 27 11 2 5 9 0 0 0
.................................................................................................GTACAGTACTATGATAACTGAA............................................................ 22 1 2 13.50 27 9 12 3 3 0 0 0
..................................................................................................TACAGTACTATGATAACTGA............................................................. 20 1 2 13.50 27 9 8 6 4 0 0 0
................................................................................................AATACAGTACTGTGATAACTGAA............................................................ 23 2 2 13.00 26 10 9 4 3 0 0 0
.................................................................................................GTACAGTACTGTGATAAATGAA............................................................ 22 1 2 13.00 26 8 11 3 4 0 0 0
..................................................................................................TATAGTACTGTGATAACTGA............................................................. 20 1 2 13.00 26 7 10 4 5 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAAC.......................................................... 23 2 2 13.00 26 10 6 6 4 0 0 0
.................................................................................................GCACAGTACTGTGATAACTGAA............................................................ 22 1 3 13.00 39 10 17 4 8 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGTAA........................................................... 23 2 2 13.00 26 12 5 5 4 0 0 0
..................................................................................................CACAGTACTGTGATAACTGAA............................................................ 21 1 3 12.67 38 9 15 5 9 0 0 0
..................................................................................................TACAGTATTGTGATAACTGA............................................................. 20 1 3 12.67 38 16 11 6 4 0 0 1
.................................................................................................GTACAGTACTGGGATAACTGAA............................................................ 22 1 2 12.50 25 16 7 1 0 0 0 1
..................................................................................................TACAGTACTGTGATAACTGC............................................................. 20 1 2 12.50 25 7 9 4 5 0 0 0
..................................................................................................TACGGTACTGTGATAACTGAA............................................................ 21 1 2 12.50 25 5 13 2 4 0 0 1
..................................................................................................TACAGTACTGTGATAACTGAAATATC....................................................... 26 3 2 12.50 25 0 0 0 0 14 11 0
..................................................................................................TACAGGACTGTGATAACTGAA............................................................ 21 1 2 12.50 25 5 10 5 5 0 0 0
.................................................................................................GTACAGTACTGTGATACCTGAAA........................................................... 23 2 3 12.33 37 19 8 3 7 0 0 0
....................................................................................................CAGTACTGTGATAACTGAAGAA......................................................... 22 0 1 12.00 12 6 2 3 1 0 0 0
..................................................................................................TACAGTACTGTGACAACTGAA............................................................ 21 1 2 12.00 24 11 10 0 3 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGAAGACG........................................................ 26 2 1 12.00 12 2 4 4 2 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGTA......................................................... 24 1 2 12.00 24 4 4 5 9 2 0 0
.................................................................................................GTACAGTACTGTTATAACTGAAAA.......................................................... 24 2 1 12.00 12 9 2 1 0 0 0 0
..................................................................................................TACAGTACTGAGATAACTGA............................................................. 20 1 2 12.00 24 6 9 6 2 0 0 1
..................................................................................................TATAGTACTGTGATAACTGAA............................................................ 21 1 2 12.00 24 9 13 0 2 0 0 0
.....................................................................................................AGTACTGTGATAACTGAA............................................................ 18 0 3 12.00 36 4 29 2 1 0 0 0
..................................................................................................TACAGTACTGGGATAACTGA............................................................. 20 1 3 12.00 36 15 14 1 6 0 0 0
.................................................................................................GTACAGTGCTGTGATAACTGA............................................................. 21 1 2 12.00 24 12 9 2 1 0 0 0
.....................................................................................................AGTACTGTGATAACTGA............................................................. 17 0 3 12.00 36 0 28 4 4 0 0 0
.................................................................................................GTACAGTACTGTGATAGCTGAA............................................................ 22 1 2 12.00 24 6 10 5 3 0 0 0
.................................................................................................GTACAGTACTGTTATAACTTAA............................................................ 22 2 3 11.67 35 20 0 5 10 0 0 0
.................................................................................................GTACACTACTGTGATAACTGA............................................................. 21 1 2 11.50 23 9 4 1 3 0 0 6
..................................................................................................TACAGTACTGTAATAACTGAA............................................................ 21 1 2 11.50 23 14 4 4 1 0 0 0
.................................................................................................ATACAGTACTGTGATAACTGAAT........................................................... 23 2 2 11.50 23 5 11 5 2 0 0 0
.................................................................................................CTACAGTACTGTGATAACTGAA............................................................ 22 1 2 11.50 23 7 11 4 1 0 0 0
.................................................................................................GTACAGAACTGTGATAACTGA............................................................. 21 1 3 11.00 33 18 6 6 2 0 0 1
.................................................................................................GTACAGTACTGTGATAACTGAAAAC......................................................... 25 2 1 11.00 11 0 3 2 5 1 0 0
..................................................................................................TACAGTACTGTGATAACTGGA............................................................ 21 1 2 11.00 22 4 14 1 3 0 0 0
..................................................................................................TACAGTACAGTGATAACTGA............................................................. 20 1 2 11.00 22 12 8 1 1 0 0 0
....................................................................................................CAGTACTGTGATAACTGAAA........................................................... 20 1 3 11.00 33 9 13 3 7 0 0 1
.................................................................................................GGACAGTACTGTGATAACTGA............................................................. 21 1 2 11.00 22 10 7 2 3 0 0 0
..................................................................................................TACAGTACTGTGATGACTGAA............................................................ 21 1 2 11.00 22 7 4 8 3 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGG............................................................. 21 1 3 11.00 33 13 9 8 3 0 0 0
..................................................................................................TACAGTACTGTTATAACTGAAGA.......................................................... 23 1 1 11.00 11 6 0 2 3 0 0 0
..................................................................................................TACAGTACTGTGATAACTGACCAA......................................................... 24 2 1 11.00 11 3 6 1 1 0 0 0
..................................................................................................TACAGTACTGTTATAACTTAA............................................................ 21 2 8 10.88 87 31 0 19 35 0 0 2
.................................................................................................GTACAGTACTGTGTTAACTGAA............................................................ 22 1 3 10.67 32 11 15 1 5 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGCTC........................................................ 25 3 3 10.67 32 0 0 0 0 14 18 0
..................................................................................................TACAGCACTGTGATAACTGAAA........................................................... 22 2 3 10.67 32 6 6 5 12 0 0 3
....................................................................................................CAGTACTGTGATAACTGAA............................................................ 19 0 2 10.50 21 6 10 2 3 0 0 0
..................................................................................................TGCAGTACTGTGATAACTGA............................................................. 20 1 2 10.50 21 1 9 4 6 0 0 1
.................................................................................................GAACAGTACTGTGATAACTGA............................................................. 21 1 2 10.50 21 3 10 2 6 0 0 0
..................................................................................................TACAGTACTGTGATGACTGA............................................................. 20 1 2 10.50 21 5 9 2 5 0 0 0
.................................................................................................GTACAGTCCTGTGATAACTGA............................................................. 21 1 3 10.33 31 6 18 6 1 0 0 0
..................................................................................................TACAGTACTGTTATAACTGAAT........................................................... 22 2 4 10.25 41 16 2 13 10 0 0 0
.................................................................................................GTACAGTACTGTGATAATTGAAAA.......................................................... 24 2 1 10.00 10 6 2 0 2 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGACAA.......................................................... 24 2 1 10.00 10 5 4 0 1 0 0 0
..................................................................................................TACAGTACTGGGATAACTGAA............................................................ 21 1 2 10.00 20 9 6 4 1 0 0 0
..................................................................................................TACAATACTGTGATAACTGA............................................................. 20 1 2 10.00 20 8 4 2 6 0 0 0
..................................................................................................TACAGTACTGTGATAACTGCAGATC........................................................ 25 3 1 10.00 10 0 0 0 0 8 2 0
..................................................................................................TACAGTACTGTGAAAACTGA............................................................. 20 1 3 10.00 30 11 9 2 8 0 0 0
.................................................................................................GTACAATACTGTGATAACTGA............................................................. 21 1 2 10.00 20 6 6 5 1 0 0 2
..................................................................................................TACAGTACTGTGATCACTGAAGATC........................................................ 25 3 1 10.00 10 0 0 0 0 5 5 0
..................................................................................................TACAGTACTGTGATAACTGAAGACC........................................................ 25 2 1 10.00 10 1 1 1 0 2 5 0
..................................................................................................TACAGTACCGTGATAACTGAAA........................................................... 22 2 2 10.00 20 3 9 3 5 0 0 0
..................................................................................................TACAGTACTGTGATAATTGAAGA.......................................................... 23 1 1 10.00 10 2 5 2 1 0 0 0
.................................................................................................GTACAGTAATGTGATAACTGAA............................................................ 22 1 2 10.00 20 3 3 6 7 0 0 1
..................................................................................................TACAGTACTGTGTTAACTGA............................................................. 20 1 3 9.67 29 14 7 5 3 0 0 0
.................................................................................................GTACAGTACTGTGATAACTGATA........................................................... 23 2 3 9.67 29 11 11 2 5 0 0 0
..................................................................................................TACAGTATTGTGATAACTGAA............................................................ 21 1 2 9.50 19 8 6 3 2 0 0 0
..................................................................................................TACAGTACTGTGATAACTGAAGC.......................................................... 23 1 2 9.50 19 9 7 1 1 1 0 0
.................................................................................................GTACAGTTCTGTGATAACTGA............................................................. 21 1 2 9.50 19 5 7 4 3 0 0 0
.................................................................................................GTACAGTACTGTGGTAACTGAA............................................................ 22 1 2 9.50 19 9 7 1 2 0 0 0
.................................................................................................GTACAGTACTGTGACAACTGAA............................................................ 22 1 2 9.50 19 7 6 3 3 0 0 0
................................................................................................CGTACAGTACTGTGATAACTGA............................................................. 22 1 2 9.50 19 3 13 1 2 0 0 0
..................................................................................................TACAGTACTGTGATAACTCAA............................................................ 21 1 2 9.50 19 8 7 3 1 0 0 0
................................................................................................AATACAGTACTGTGATAACTGA............................................................. 22 2 4 9.25 37 13 15 2 6 0 0 1
..................................................................................................TACAGTACTGTGATAACTGACG........................................................... 22 1 2 9.00 18 2 9 4 3 0 0 0
..................................................................................................TACCGTACTGTGATAACTGAA............................................................ 21 1 2 9.00 18 2 15 1 0 0 0 0
..................................................................................................TACAGTACTGAGATAACTGAA............................................................ 21 1 2 9.00 18 6 7 1 3 0 0 1
.................................................................................................GTACTGTACTGTGATAACTGAA............................................................ 22 1 2 9.00 18 3 11 2 2 0 0 0
.................................................................................................GTACAGTACTGTGCTAACTGAA............................................................ 22 1 2 9.00 18 9 3 2 3 1 0 0
.................................................................................................GTACAGTACTGCGATAACTGAAAA.......................................................... 24 2 1 9.00 9 6 2 0 1 0 0 0

Anti-sense strand reads

CTCCCGCCACTCGACCCACCGCCCCTTATAAGTCCATCTATACTCTGACTTGACAGGAAAAAGCCAATAGTACCATGGCTACGACATATAGACTTTCCATGTCATGACACTATTGACTTCTTACCACCACGGTAGTGTAACTCTTTCCCAACCCCTGACACCACCTCGATACGTCGGAA

***********************************.....(((.((.((.((((.((((((((((((((((((((......(((((((.........))))))))))))))))))))))))).))))))..)))).))).....*********************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex
...................................................................................................TGTCGTGACACTATTGACT............................................................. 19 1 5 0.20 1 1

Generated: 09/01/2015 at 12:11 PM