ID:

mml-let-7i

 Coordinate:

chr11:60028315-60028399 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-53.1 -52.9 -52.9

Sense Strand Reads

GCCGCTTTGCTGCCCTCCGCGTGGTCCCGTGCCTCCCCTACACCATGGCCCTGGCTGAGGTAGTAGTTTGTGCTGTTGGTCGGGTTGTGACATTGCCCGCTGTGGAGATAACTGCGCAAGCTACTGCCTTGCTAGTGCTGGTGATGCTCAGCGCCGCGGAGGACAATGGCTGGGAATCCCCTTTG

****************************************(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).))))))).....************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR116843

cortex		 SRR116842

seminal vesicle		 SRR116840

epididymis		 SRR116841

prostate		 SRR116839

testes		 SRR116845

epididymis		 SRR116844

epididymis
.......................................................TGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 0 1 84508.00 84508 40951 17122 12694 11946 1795 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 1 1 36444.00 36444 15687 7608 6619 5592 938 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 1 1 18859.00 18859 6455 4624 3836 3493 450 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 0 1 9931.00 9931 4142 2316 1862 1386 225 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTT............................................................................................................ 22 1 1 4843.00 4843 2683 33 988 1032 107 0 0
.......................................................TGAGGTAGTAGTTTGTGCTG.............................................................................................................. 20 0 1 2992.00 2992 896 772 886 381 57 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTT............................................................................................................ 22 1 1 2595.00 2595 1333 36 691 450 85 0 0
.......................................................TGAGGTAGTAGTTTGTGTTGTT............................................................................................................ 22 1 1 2332.00 2332 1586 48 377 317 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTT.......................................................................................................... 24 2 1 1469.00 1469 550 278 244 361 36 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAA........................................................................................................... 23 2 1 1399.00 1399 380 362 343 278 36 0 0
.......................................................TGAGGTAGTAGTTTGTTCTGTT............................................................................................................ 22 1 2 1384.50 2769 1828 15 471 378 77 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTT........................................................................................................... 23 2 1 1181.00 1181 529 24 358 232 38 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTT............................................................................................................. 21 1 1 880.00 880 451 19 191 201 18 0 0
.......................................................TGAGGTAGTAGTTTGTGCT............................................................................................................... 19 0 1 816.00 816 260 187 232 126 11 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTTT........................................................................................................... 23 2 2 786.00 1572 722 10 395 392 53 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAATC........................................................................................................ 26 2 2 756.50 1513 0 0 0 0 0 784 729
.......................................................TGAGGTAGTAGTTTGTGCTGTTAA.......................................................................................................... 24 2 2 711.50 1423 405 385 305 290 37 1 0
.......................................................TGAGGTAGTAGTTTGTACTGTT............................................................................................................ 22 1 2 687.50 1375 914 203 125 122 11 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTTA........................................................................................................... 23 2 2 622.50 1245 559 9 324 316 37 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTA........................................................................................................... 23 2 1 621.00 621 255 9 198 140 19 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTA............................................................................................................ 22 1 1 559.00 559 142 166 142 96 13 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGA............................................................................................................. 21 1 1 533.00 533 113 148 169 95 8 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTG........................................................................................................... 23 0 1 501.00 501 141 178 82 89 11 0 0
.......................................................TGAGGTAGTAGTTTGTGCAGTT............................................................................................................ 22 1 2 489.00 978 370 419 100 82 7 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTATC........................................................................................................ 26 2 1 483.00 483 0 0 0 0 0 272 211
.......................................................TGAGGTAGTAGTTTGTGCTT.............................................................................................................. 20 1 1 410.00 410 143 43 139 75 10 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGT............................................................................................................. 21 1 1 402.00 402 194 9 111 78 10 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAT.......................................................................................................... 24 2 1 316.00 316 103 73 62 58 11 5 4
.......................................................TGAGGTAGTAGTTTGTGCTGTTTA.......................................................................................................... 24 2 1 307.00 307 91 79 70 55 10 0 2
.......................................................TGAGGTAGTAGTTTGTGCTGTAT........................................................................................................... 23 2 1 276.00 276 73 59 92 38 14 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAAATC........................................................................................................ 26 3 2 264.50 529 0 0 0 0 0 263 266
.......................................................TGAGGTAGTAGTTTGTTCTGTTT........................................................................................................... 23 2 4 259.50 1038 605 5 205 182 41 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTATC......................................................................................................... 25 3 1 254.00 254 0 0 0 0 0 135 119
.......................................................TGAGGTAGTAGTTTGTGTTGTTT........................................................................................................... 23 2 2 231.50 463 270 10 101 82 0 0 0
.......................................................TGAGGTAGTAGTTTGTGC................................................................................................................ 18 0 1 230.00 230 83 60 53 31 2 1 0
.......................................................TGAGGTAGTAGCTTGTGCTGTT............................................................................................................ 22 1 1 195.00 195 176 13 4 2 0 0 0
.......................................................TGAGGTAGTAGTTTGTCCCGTT............................................................................................................ 22 2 2 192.50 385 275 48 43 15 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTATC.......................................................................................................... 24 3 3 183.33 550 0 0 0 0 0 241 309
.......................................................TGAGGTAGTAGTTTGTGCTGATC........................................................................................................... 23 2 1 173.00 173 0 0 0 0 0 63 110
.......................................................TGAGGTAGTAGTTTGTGCTGTTGATC........................................................................................................ 26 1 1 167.00 167 0 0 0 0 0 95 72
.......................................................TGAGGTAGTAGTTTGTACAGTTGATC........................................................................................................ 26 3 2 162.00 324 0 0 2 0 0 253 69
.......................................................TGAGGTAGTAGTTTGTTCTGT............................................................................................................. 21 1 2 150.50 301 168 1 81 47 4 0 0
.......................................................TGAGGTAGTAGATTGTGCTGTT............................................................................................................ 22 1 1 133.00 133 105 9 8 10 1 0 0
.......................................................TGAGGTAGTAGTTTGTATTGTT............................................................................................................ 22 2 11 120.64 1327 926 1 156 243 1 0 0
.......................................................CGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 105.00 105 55 22 12 15 1 0 0
.......................................................TGAGGTAGTAGTTTGTTTTGTT............................................................................................................ 22 2 4 99.25 397 302 0 46 48 1 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 94.00 94 55 23 5 9 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCGGTT............................................................................................................ 22 1 1 94.00 94 74 15 2 3 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTTGTTA........................................................................................................... 23 2 1 93.00 93 46 3 31 12 1 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 86.00 86 28 42 10 6 0 0 0
.......................................................TGAGGTAGTAGTTTTTGCTTTT............................................................................................................ 22 2 6 85.83 515 303 2 118 71 21 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 74.00 74 18 15 9 10 22 0 0
.......................................................TGAGGTAGTAGGTTGTGCTGTT............................................................................................................ 22 1 1 72.00 72 48 12 6 6 0 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGTT............................................................................................................ 22 1 1 70.00 70 39 9 7 14 1 0 0
.......................................................TGAGGTAGTAGTTTGTGTTGT............................................................................................................. 21 1 1 68.00 68 44 5 8 10 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTA............................................................................................................ 22 2 1 68.00 68 21 5 20 20 2 0 0
.......................................................TGAGGTAGTAGTTTTTGCTG.............................................................................................................. 20 1 2 67.50 135 43 4 57 27 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTTT......................................................................................................... 25 2 1 62.00 62 9 11 3 37 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAGATC........................................................................................................ 26 2 1 60.00 60 0 0 0 0 0 33 27
.......................................................TGAGGTAGTAGTTTGTGCTGTATATC........................................................................................................ 26 3 1 59.00 59 0 0 0 0 0 23 36
.......................................................TGAGGTAGTAGATTGTGCTGTTT........................................................................................................... 23 2 1 59.00 59 48 2 6 3 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTC........................................................................................................... 23 1 1 56.00 56 24 10 9 9 2 2 0
.......................................................TGAGGTAGTAGCTTGTGCTGTTT........................................................................................................... 23 2 1 56.00 56 54 1 0 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTTCTG.............................................................................................................. 20 1 2 55.50 111 46 0 47 13 5 0 0
.......................................................TGAGGTAGTAGTTTTTTCTGTT............................................................................................................ 22 2 5 49.60 248 142 0 50 44 12 0 0
.......................................................TGAGGTAGCAGTTTGTGCTGTT............................................................................................................ 22 1 1 49.00 49 28 9 7 4 1 0 0
.......................................................TGGGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 47.00 47 17 13 7 7 3 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGTTT........................................................................................................... 23 2 1 46.00 46 17 11 6 12 0 0 0
.......................................................TGAGGTAGTAGTTTGCGCTGTT............................................................................................................ 22 1 1 44.00 44 22 13 4 4 1 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 43.00 43 8 23 10 0 2 0 0
.......................................................TGAGGTCGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 42.00 42 24 7 5 5 1 0 0
.......................................................TGAGGTAGTAGTTTGTCCTGTT............................................................................................................ 22 1 1 42.00 42 28 6 3 5 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCAGT............................................................................................................. 21 1 2 41.50 83 22 34 20 5 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGAA............................................................................................................ 22 2 2 40.00 80 22 9 34 13 2 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 40.00 40 19 5 7 9 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGCT............................................................................................................ 22 1 1 38.00 38 21 7 2 7 1 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGTT............................................................................................................ 22 1 1 37.00 37 20 6 6 4 1 0 0
.......................................................TGAGGTAGTAGTTTGTG................................................................................................................. 17 0 1 34.00 34 3 8 8 10 1 1 3
.......................................................TGAGGTAGTAGTTTGTGCAGTTA........................................................................................................... 23 2 2 32.50 65 26 24 5 10 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCCGTT............................................................................................................ 22 1 1 32.00 32 17 9 4 2 0 0 0
.......................................................CGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 32.00 32 13 6 10 3 0 0 0
.......................................................TGAGGTAGTACTTTGTGCTGTT............................................................................................................ 22 1 1 31.00 31 14 3 1 2 11 0 0
.......................................................TGAGGTAGTAGTTTGTGCTCTT............................................................................................................ 22 1 1 31.00 31 24 1 5 1 0 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGTTA........................................................................................................... 23 2 1 30.00 30 26 3 0 1 0 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 29.00 29 11 9 5 4 0 0 0
.......................................................TGAGGGAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 28.00 28 5 11 5 3 4 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGT.......................................................................................................... 24 1 1 28.00 28 8 10 6 3 1 0 0
.......................................................TGAGGTAGTAGTTTGTACTGT............................................................................................................. 21 1 2 28.00 56 30 12 8 5 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTA.............................................................................................................. 20 1 1 27.00 27 8 4 6 9 0 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 0 1 26.00 26 4 9 7 4 2 0 0
.......................................................TGAGGTAGTAGATTGTGTTGTT............................................................................................................ 22 2 7 25.14 176 138 5 23 10 0 0 0
.......................................................TGAGGTAGAAGTTTGTGCTGTT............................................................................................................ 22 1 1 25.00 25 9 6 6 4 0 0 0
.......................................................TGAGGTCGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 25.00 25 14 1 5 5 0 0 0
.......................................................TGAGGTAGTAGTCTGTGCTGTT............................................................................................................ 22 1 1 25.00 25 9 4 5 7 0 0 0
.......................................................TGAGGTAGTAGATTGTGCTGTTA........................................................................................................... 23 2 1 25.00 25 19 1 3 2 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGAT............................................................................................................ 22 1 1 24.00 24 7 7 7 3 0 0 0
.......................................................AGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 24.00 24 12 6 2 4 0 0 0
.......................................................TCAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 24.00 24 12 1 2 8 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAG........................................................................................................... 23 1 1 23.00 23 2 12 5 4 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTC............................................................................................................ 22 1 1 23.00 23 14 5 2 2 0 0 0
.......................................................TGAGGGAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 22.00 22 4 2 3 9 4 0 0
.......................................................TGAGGTAGTAGTTTATGCTGTT............................................................................................................ 22 1 1 22.00 22 10 6 4 2 0 0 0
.......................................................TGAGGAAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 21.00 21 6 2 5 1 7 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 21.00 21 10 3 5 3 0 0 0
.......................................................CGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 21.00 21 8 4 4 4 1 0 0
.......................................................TGAGGTAGTACTTTGTGCTGTTT........................................................................................................... 23 2 1 20.00 20 10 3 0 1 6 0 0
.......................................................TGAGGTACTAGTTTGTGCTGTT............................................................................................................ 22 1 1 20.00 20 12 3 1 4 0 0 0
.......................................................TGAGGTAGTAGCTTGTGCTGT............................................................................................................. 21 1 1 20.00 20 19 1 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGGGCTGTT............................................................................................................ 22 1 1 20.00 20 4 11 2 2 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTA............................................................................................................. 21 2 3 20.00 60 19 10 13 15 3 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTC.......................................................................................................... 24 2 1 19.00 19 4 1 1 0 0 8 5
.......................................................TGAGGTAGTCGTTTGTCCCGTT............................................................................................................ 22 3 5 18.40 92 53 0 19 19 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTTG........................................................................................................... 23 1 1 18.00 18 10 0 4 4 0 0 0
.......................................................TGAGGTAGTAGTTTCTGCTGTT............................................................................................................ 22 1 1 18.00 18 10 5 2 1 0 0 0
.......................................................TGGGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 18.00 18 6 5 4 3 0 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGTTT........................................................................................................... 23 2 2 17.50 35 13 13 4 2 3 0 0
.......................................................TGAGGTAGTAGTTTGTGCA............................................................................................................... 19 1 5 17.20 86 22 15 22 22 5 0 0
.......................................................TGAGGTAGTAGTTTGTCCTGT............................................................................................................. 21 1 1 17.00 17 11 1 4 1 0 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTGCTT................................................... 23 1 1 17.00 17 6 1 5 5 0 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGTTA........................................................................................................... 23 2 1 17.00 17 3 4 2 8 0 0 0
.......................................................TGAGGTCGTCGTTTGTGCTGTT............................................................................................................ 22 2 1 17.00 17 10 1 4 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTGGTGTT............................................................................................................ 22 1 1 17.00 17 9 4 3 1 0 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGTTT........................................................................................................... 23 2 1 16.00 16 8 3 4 1 0 0 0
.......................................................TGAGGTAGGAGTTTGTGCTGTT............................................................................................................ 22 1 1 16.00 16 7 4 1 3 1 0 0
.......................................................TGAGGTGGTAGTTTGTGCTGT............................................................................................................. 21 1 1 16.00 16 7 3 4 2 0 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGTT............................................................................................................ 22 1 1 16.00 16 4 8 1 2 1 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTAA.......................................................................................................... 24 3 3 15.67 47 17 0 20 8 2 0 0
.......................................................TGCGGTAGTAGTTTGTCCCGTT............................................................................................................ 22 3 3 15.33 46 3 43 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGA.......................................................................................................... 24 1 1 15.00 15 5 5 2 3 0 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 2 14.50 29 6 8 2 5 8 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 14.00 14 6 4 1 3 0 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 14.00 14 2 9 2 1 0 0 0
.......................................................TGAAGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 14.00 14 4 3 1 4 2 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTGCT.................................................... 22 0 1 14.00 14 9 2 2 1 0 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 14.00 14 5 1 0 8 0 0 0
.......................................................TGAGGTAGTAGATTGTGCTGT............................................................................................................. 21 1 1 14.00 14 6 2 5 0 1 0 0
.......................................................TGAGGTAATAGTTTGTGCTGTT............................................................................................................ 22 1 1 14.00 14 8 4 2 0 0 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 24 1 1 14.00 14 4 7 0 3 0 0 0
.......................................................TGAGGTAGCAGTTTGTGCTGTTT........................................................................................................... 23 2 1 14.00 14 8 2 2 2 0 0 0
.......................................................TGAGGTAGTAGGTTGTGCTGTTT........................................................................................................... 23 2 2 14.00 28 11 13 0 3 1 0 0
........................................................GAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 22 1 1 14.00 14 10 3 1 0 0 0 0
.......................................................TGAGGTAGTATTTTGTGCTGTT............................................................................................................ 22 1 2 13.50 27 13 1 7 2 4 0 0
.......................................................TGATGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 13.00 13 7 1 0 3 2 0 0
.......................................................GGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 13.00 13 6 3 3 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTTG.............................................................................................................. 20 1 1 13.00 13 8 0 3 2 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGGT............................................................................................................ 22 1 1 13.00 13 4 7 2 0 0 0 0
.......................................................TGGGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 13.00 13 2 4 4 2 1 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 13.00 13 3 3 0 2 5 0 0
.......................................................TGAGGTAGTAGCTTGTGCTTTT............................................................................................................ 22 2 1 13.00 13 12 0 0 1 0 0 0
........................................................GAGGTAGTAGTTTGTGCTGTT............................................................................................................ 21 0 1 13.00 13 6 2 3 2 0 0 0
.......................................................TGTGGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 13.00 13 6 5 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTG........................................................................................................... 23 1 1 12.00 12 7 0 3 2 0 0 0
.......................................................TGAGGTAGTAGGTTGTGCTGTTA........................................................................................................... 23 2 1 12.00 12 7 5 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTCCCGT............................................................................................................. 21 2 2 12.00 24 13 6 3 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTGA........................................................................................................... 23 2 1 12.00 12 5 5 1 1 0 0 0
.......................................................TGAGGTAGTAGTCTGTGCTGTTT........................................................................................................... 23 2 1 12.00 12 5 4 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTAA........................................................................................................... 23 3 10 11.90 119 39 3 42 31 4 0 0
.......................................................TGAGGTAGTAGTTTGTACTGTTA........................................................................................................... 23 2 3 11.67 35 18 8 5 4 0 0 0
.......................................................TCAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 11.00 11 5 0 0 5 1 0 0
.......................................................TGAGGTAGTAGTTTGTTCTGTTG........................................................................................................... 23 1 1 11.00 11 6 0 3 2 0 0 0
.......................................................TGAGGTAGTAGTTTGCGCTGTTA........................................................................................................... 23 2 1 11.00 11 5 2 2 2 0 0 0
.....................................................AATGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 2 3 11.00 33 15 7 5 4 2 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGTTT........................................................................................................... 23 2 1 11.00 11 5 4 2 0 0 0 0
.......................................................TGAGCTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 11.00 11 6 2 0 2 1 0 0
.......................................................TGAGGTAGTAGTTTTTGCTTT............................................................................................................. 21 2 10 11.00 110 56 0 29 17 8 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTCATC........................................................................................................ 26 2 1 11.00 11 0 0 0 0 0 5 6
.......................................................TGAGGTAGTAGTTTGTTCTGTTAATC........................................................................................................ 26 3 3 10.00 30 0 0 0 0 0 12 18
.......................................................TGAGGTAGTAGTTTATGCTGTTA........................................................................................................... 23 2 1 10.00 10 2 0 2 6 0 0 0
.........................................................AGGTAGTAGTTTGTGCTGTT............................................................................................................ 20 0 1 10.00 10 6 1 2 1 0 0 0
.......................................................TGAGGTAGTAGGTTGTGTTGTTGATC........................................................................................................ 26 3 1 10.00 10 0 0 0 0 0 10 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTTC......................................................................................................... 25 3 1 10.00 10 0 0 0 1 0 4 5
.......................................................TGAGGTAGTAGTTTGTGCTGTG............................................................................................................ 22 1 1 10.00 10 4 3 2 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAG.......................................................................................................... 24 1 1 10.00 10 3 3 1 2 1 0 0
.......................................................TGAGGTTGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 10.00 10 6 3 0 1 0 0 0
.......................................................TGCGGTAGTCGTTTGTGCTGTT............................................................................................................ 22 2 1 10.00 10 4 6 0 0 0 0 0
.......................................................TGAGGAAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 10.00 10 5 1 0 1 3 0 0
.......................................................TGAGGTAGTAGTTAGTGCTGTT............................................................................................................ 22 1 1 10.00 10 4 3 2 1 0 0 0
.......................................................TGAGGTAGTCGTTTGTGCTGT............................................................................................................. 21 1 1 10.00 10 3 0 2 5 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTTTTT............................................................................................................ 22 2 6 9.83 59 28 0 11 20 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGCTT........................................................................................................... 23 2 2 9.50 19 14 1 1 3 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAA......................................................................................................... 25 3 4 9.25 37 9 11 8 8 1 0 0
.......................................................TGAGGTCGTAGTTTGTCCCGTT............................................................................................................ 22 3 5 9.20 46 40 3 2 1 0 0 0
.......................................................TGAGGTAGTAGTTTGCGCTGTTT........................................................................................................... 23 2 1 9.00 9 3 2 2 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTAT............................................................................................................ 22 2 1 9.00 9 2 0 5 2 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTATT............................................................................................................ 22 1 1 9.00 9 5 3 1 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCGGTTA........................................................................................................... 23 2 1 9.00 9 5 4 0 0 0 0 0
.......................................................TGACGTAGTAGTTTGTGCTGTT............................................................................................................ 22 1 1 9.00 9 1 1 1 0 6 0 0
.......................................................TGAGGTAGTAATTTGTGCTGTT............................................................................................................ 22 1 1 9.00 9 2 5 1 0 1 0 0
.......................................................CGAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 9.00 9 6 1 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTTTAATC........................................................................................................ 26 3 2 8.50 17 0 0 0 0 0 6 11
.......................................................TGAGGTAGTAGTTTGTGCTGAAA........................................................................................................... 23 3 7 8.14 57 12 8 32 5 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTCA.......................................................................................................... 24 2 1 8.00 8 2 2 2 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTAA............................................................................................................. 21 2 2 8.00 16 4 4 8 0 0 0 0
.......................................................TGAGGTAGTAGTTCGTGCTGTTA........................................................................................................... 23 2 1 8.00 8 4 1 3 0 0 0 0
.......................................................AGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 8.00 8 2 2 3 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCGTT............................................................................................................. 21 2 1 8.00 8 7 1 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGATA........................................................................................................... 23 2 1 8.00 8 2 3 3 0 0 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 8.00 8 2 4 2 0 0 0 0
.......................................................TGAGGTATTAGTTTGTGCTGTT............................................................................................................ 22 1 2 8.00 16 6 4 2 2 2 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTCT........................................................................................................... 23 2 1 8.00 8 3 3 2 0 0 0 0
.......................................................TGAGGCAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 8.00 8 2 0 1 2 3 0 0
.......................................................TGAGGTAGTAGTTTGTACTTTT............................................................................................................ 22 2 4 7.75 31 17 0 6 7 1 0 0
.......................................................TGAGGTAGTAGTTTGT.................................................................................................................. 16 0 3 7.67 23 1 13 6 3 0 0 0
.......................................................TGAGGTAGTAGTTTGTTCTGTTTATC........................................................................................................ 26 3 1 7.00 7 0 0 0 0 0 4 3
.......................................................TGAGGTAGTAGTTTGAGCTGTT............................................................................................................ 22 1 1 7.00 7 3 1 0 3 0 0 0
.......................................................TGAGGTAGTAGTTTCTGCTGTTA........................................................................................................... 23 2 1 7.00 7 3 1 1 2 0 0 0
.......................................................TGAGGTAGTAGTTTGCGCTGT............................................................................................................. 21 1 1 7.00 7 3 3 0 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCCGTTA........................................................................................................... 23 2 1 7.00 7 2 4 0 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTCTTT........................................................................................................... 23 2 1 7.00 7 5 2 0 0 0 0 0
.......................................................TGATGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 7.00 7 2 1 2 0 2 0 0
.......................................................TGAGGTAGTAGTTTATGCTGTTT........................................................................................................... 23 2 1 7.00 7 3 3 1 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTAT......................................................................................................... 25 2 1 7.00 7 0 3 2 1 0 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGGTT........................................................................................................... 23 2 1 7.00 7 3 2 1 0 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTATC............................................................................................................ 22 2 1 7.00 7 0 0 0 0 0 2 5
.......................................................TGAGGTAGTAGTTTTTGCTGTTTT.......................................................................................................... 24 3 11 6.73 74 30 1 13 29 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAC.......................................................................................................... 24 2 2 6.50 13 0 0 0 1 0 7 5
.......................................................TGAGGTAGTAGTTTGTGCTTTTTT.......................................................................................................... 24 3 7 6.29 44 23 0 8 11 2 0 0
.......................................................TGAGGTAGTAGTTTTTGCT............................................................................................................... 19 1 4 6.25 25 7 1 8 7 2 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 6.00 6 0 1 1 3 0 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGCTA........................................................................................................... 23 2 1 6.00 6 3 1 1 0 1 0 0
.......................................................TGAGGTAGTAGTTCGTGCTG.............................................................................................................. 20 1 1 6.00 6 1 3 2 0 0 0 0
.......................................................TGAGGTAGCAGTTTGTGCTGTTA........................................................................................................... 23 2 1 6.00 6 1 4 0 1 0 0 0
.......................................................TGAGGTAGTAGGTTGTGCTGT............................................................................................................. 21 1 1 6.00 6 2 3 0 1 0 0 0
.....................................................TCTGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 24 1 1 6.00 6 5 0 1 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTCCAGTTG........................................................................................................... 23 2 2 6.00 12 5 4 2 1 0 0 0
.......................................................TGAGGGAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 6.00 6 0 0 1 4 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCGGT............................................................................................................. 21 1 1 6.00 6 5 1 0 0 0 0 0
.......................................................TGCGGTAGTAGTTTGTGCTGTTTATC........................................................................................................ 26 3 1 6.00 6 0 0 0 0 0 3 3
.......................................................TGAGGTAGTAGTTTGTGCTGTAAA.......................................................................................................... 24 3 2 6.00 12 4 5 1 1 0 0 1
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAC......................................................................................................... 25 3 2 6.00 12 0 0 1 0 0 6 5
.......................................................TGAGGTAGTAGCTTGTGCTG.............................................................................................................. 20 1 1 6.00 6 6 0 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTACTC........................................................................................................ 26 2 1 6.00 6 0 0 0 0 0 0 6
.......................................................TGAGGTAGTAGTATGTGCTGTT............................................................................................................ 22 1 1 6.00 6 0 4 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTGGGCTGTTT........................................................................................................... 23 2 1 6.00 6 2 1 2 0 1 0 0
......................................................CTGAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 24 1 1 6.00 6 1 2 2 1 0 0 0
.......................................................TGAGGTACTAGTTTGTGCTGTTT........................................................................................................... 23 2 2 6.00 12 8 1 2 1 0 0 0
.......................................................TGAGGTAGTATTTTGTGCTGTTT........................................................................................................... 23 2 3 5.67 17 11 2 2 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTTCT............................................................................................................... 19 1 4 5.50 22 9 0 9 4 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTAAT......................................................................................................... 25 2 2 5.50 11 1 2 2 2 0 3 1
.......................................................TGAGGTAGTAGTTTGTGCCGTTT........................................................................................................... 23 2 2 5.50 11 8 0 3 0 0 0 0
.......................................................TGAGGTAGTAGTTTTTACTGTT............................................................................................................ 22 2 6 5.50 33 14 0 5 9 5 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGA............................................................................................................. 21 2 5 5.20 26 3 1 13 9 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTAACTC........................................................................................................ 26 3 1 5.00 5 0 0 0 0 0 2 3
.......................................................TGAGGTAGTCGTTTGTGCTTTT............................................................................................................ 22 2 1 5.00 5 2 0 0 2 1 0 0
.......................................................TGAGGTAGTAGATTGTGCTG.............................................................................................................. 20 1 1 5.00 5 4 1 0 0 0 0 0
......................................................ATGAGGTAGTAGTTTGTGCTGTT............................................................................................................ 23 1 1 5.00 5 1 2 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTGGTTGATC........................................................................................................ 26 3 1 5.00 5 0 0 0 0 0 5 0
.......................................................TGAAGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 5.00 5 0 1 0 3 1 0 0
.......................................................TGAGGTAGTAGTTTGTGATGTT............................................................................................................ 22 1 1 5.00 5 2 1 2 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTGAAC........................................................................................................ 26 2 1 5.00 5 2 2 1 0 0 0 0
.......................................................TGACGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 5.00 5 2 1 2 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCAGTTG........................................................................................................... 23 1 1 5.00 5 2 2 0 1 0 0 0
.......................................................TGTGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 5.00 5 1 2 2 0 0 0 0
.......................................................TGAGGTAGTAGTTTATGCTGT............................................................................................................. 21 1 1 5.00 5 2 2 1 0 0 0 0
.......................................................AGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 2 5.00 10 2 4 4 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTATTT........................................................................................................ 26 3 1 5.00 5 0 2 0 3 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTTAA......................................................................................................... 25 3 2 5.00 10 5 4 0 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGTAGTT............................................................................................................ 22 2 8 5.00 40 24 2 9 5 0 0 0
.......................................................TGAGGTAGTAGTTTGTGGTGTTA........................................................................................................... 23 2 1 5.00 5 2 2 0 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGATT........................................................................................................... 23 2 1 5.00 5 2 0 2 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCCGT............................................................................................................. 21 1 1 5.00 5 3 1 0 1 0 0 0
.......................................................TGAGGTAGTAGTCTGTGCTGTTA........................................................................................................... 23 2 1 5.00 5 1 4 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTCCTGTTT........................................................................................................... 23 2 3 5.00 15 7 4 1 2 1 0 0
.......................................................TGAGGTAGGAGTTTGTGCTGT............................................................................................................. 21 1 1 5.00 5 2 2 0 1 0 0 0
.......................................................TGAGGAAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 3 4.67 14 1 6 0 0 7 0 0
.......................................................TGCGGTCGTCGTTTGTGCTGTT............................................................................................................ 22 3 2 4.50 9 6 0 3 0 0 0 0
.......................................................TGAGGTAGTACTTTGTGCTGTTA........................................................................................................... 23 2 2 4.50 9 6 0 0 2 1 0 0
.......................................................TGAGATAGTAGTTTGTGCTGTT............................................................................................................ 22 1 2 4.50 9 6 0 0 3 0 0 0
.......................................................TGAGGTAGTAGGTTGTGTTGTTG........................................................................................................... 23 2 3 4.33 13 8 0 1 4 0 0 0
.....................................................AATGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 25 3 3 4.00 12 4 1 7 0 0 0 0
.......................................................TGAGGTCGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 4.00 4 2 2 0 0 0 0 0
.......................................................TGAGGTAGCAGTTTGTGCTGT............................................................................................................. 21 1 1 4.00 4 2 0 1 0 1 0 0
.......................................................TGAGGTAGTAGTTGGTGCTGTT............................................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0 0
.......................................................TGAGGTAGTATTTTGTGCTGTTTATC........................................................................................................ 26 3 1 4.00 4 0 0 0 0 0 3 1
.......................................................TGAGGTAGTAGTTTGTGCTGC............................................................................................................. 21 1 2 4.00 8 2 4 2 0 0 0 0
...............................................................................................................CTGCGCAAGCTACTGCCTTA...................................................... 20 1 1 4.00 4 2 1 1 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTCTTA........................................................................................................... 23 2 1 4.00 4 2 0 1 1 0 0 0
.......................................................TGCGGTCGTAGTTTGTGCTGTT............................................................................................................ 22 2 1 4.00 4 2 0 1 0 1 0 0
.......................................................TGAGGTAGTAGTTTTTGCTGTTAATC........................................................................................................ 26 3 2 4.00 8 0 0 0 0 0 3 5
.......................................................TGAGGTAGTAGTTTGTGCTGTTCT.......................................................................................................... 24 2 1 4.00 4 2 1 1 0 0 0 0
.......................................................TCAGGTAGTAGTTTGTGCTGTTA........................................................................................................... 23 2 1 4.00 4 0 0 0 4 0 0 0
.......................................................TTAGGTAGTAGTTTGTGCTGTTTATC........................................................................................................ 26 3 1 4.00 4 0 0 0 0 0 2 2
.......................................................TGAGGTAGTAGTTCGTGCTGT............................................................................................................. 21 1 1 4.00 4 1 2 0 1 0 0 0
.......................................................TGAGGTCGTAGTTTGTGCTGT............................................................................................................. 21 1 1 4.00 4 3 0 1 0 0 0 0
.......................................................CGAGGTAGTAGTTTGTGCTG.............................................................................................................. 20 1 1 4.00 4 0 2 1 1 0 0 0
........................................................TAGGTAGTAGTTTGTGCTGTT............................................................................................................ 21 1 1 4.00 4 1 1 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGGTGTTT........................................................................................................... 23 2 1 4.00 4 2 1 0 1 0 0 0
.......................................................GGAGGTAGTAGTTTGTGCTGTTT........................................................................................................... 23 2 1 4.00 4 1 1 1 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTCA........................................................................................................... 23 2 1 4.00 4 3 1 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTCCAGTTGATC........................................................................................................ 26 3 1 4.00 4 0 0 0 0 0 3 1
.......................................................TGAGGTAGTAGTTTGTACT............................................................................................................... 19 1 3 4.00 12 6 4 2 0 0 0 0
.......................................................TGAGGTAGTGGTTTGTGCTGTTA........................................................................................................... 23 2 1 4.00 4 1 2 0 1 0 0 0
.........................................................AGGTAGTAGTTTGTGCTGTTTATC........................................................................................................ 24 2 1 4.00 4 0 0 0 0 0 4 0
.......................................................TGAGGTAGTAGTTTGTGCTCT............................................................................................................. 21 1 1 4.00 4 3 0 1 0 0 0 0
.......................................................TAAGGTAGTAGTTTGTGCTGT............................................................................................................. 21 1 1 4.00 4 1 0 2 1 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTATTT........................................................................................................... 23 2 1 4.00 4 3 1 0 0 0 0 0
.......................................................TGAGGTAGTAGTTTGTGCTGTTATT......................................................................................................... 25 2 1 4.00 4 0 1 2 1 0 0 0
.......................................................TGAGGTACTAGTTTGTGCTGTTA........................................................................................................... 23 2 2 4.00 8 3 1 1 2 1 0 0
.........................................................AGGTAGTAGTTTGTGCTGTTT........................................................................................................... 21 1 1 4.00 4 0 2 0 1 1 0 0
.......................................................TGAGGTAGTAGTTTGTGCTTATC........................................................................................................... 23 3 4 4.00 16 0 0 0 0 0 10 6
.......................................................TGAGGTAGTAGTTTGTGCTGTACATC........................................................................................................ 26 3 2 4.00 8 0 0 0 0 0 6 2

Anti-sense strand reads

CGGCGAAACGACGGGAGGCGCACCAGGGCACGGAGGGGATGTGGTACCGGGACCGACTCCATCATCAAACACGACAACCAGCCCAACACTGTAACGGGCGACACCTCTATTGACGCGTTCGATGACGGAACGATCACGACCACTACGAGTCGCGGCGCCTCCTGTTACCGACCCTTAGGGGAAAC

*************************************(((((..((.(((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))).))))))).....**************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR116841

prostate
.............................................................................................................TTGACGTGTTCGATGAGGGAGC...................................................... 22 3 4 0.25 1 1

Generated: 09/01/2015 at 12:07 PM